Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.0e-154 550.1 280 100.0
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 8.6e-154 547.0 280 99.3
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 8.6e-53 211.5 198 60.1
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 8.9e-50 201.4 195 59.0
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 2.0e-49 200.3 205 55.6
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 7.5e-49 198.4 197 56.3
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 4.9e-48 195.7 197 56.3
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 1.1e-47 194.5 197 58.9
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 1.6e-46 190.7 197 57.9
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 5.9e-46 188.7 199 55.8
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 5.9e-46 188.7 199 55.8
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 1.0e-45 188.0 193 56.0
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.3e-45 187.6 192 56.8
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 1.7e-45 187.2 195 54.9
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.7e-45 187.2 160 63.8
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 2.9e-45 186.4 191 53.9
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 8.6e-45 184.9 195 54.4
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 1.2e-43 181.0 209 51.2
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 2.1e-43 180.3 192 55.2
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 2.8e-43 179.9 198 53.0
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 2.8e-43 179.9 184 56.0
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 8.0e-43 178.3 212 50.5
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.0e-42 177.9 122 73.0
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.8e-42 177.2 204 53.4
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 2.3e-42 176.8 189 56.6
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 3.1e-42 176.4 199 54.8
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 4.0e-42 176.0 185 57.8
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 5.2e-42 175.6 195 52.8
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 5.2e-42 175.6 199 52.8
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 5.2e-42 175.6 122 72.1
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 6.8e-42 175.3 204 53.9
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 6.8e-42 175.3 197 55.8
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 6.8e-42 175.3 120 74.2
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 6.8e-42 175.3 192 53.6
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 8.9e-42 174.9 120 70.8
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 8.9e-42 174.9 194 55.2
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 2.0e-41 173.7 201 56.2
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 9.8e-41 171.4 205 53.2
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 2.2e-40 170.2 178 57.3
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 3.7e-40 169.5 199 54.8
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 4.9e-40 169.1 206 51.5
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 4.9e-40 169.1 195 52.3
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 6.4e-40 168.7 164 55.5
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.9e-39 167.2 214 45.8
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 3.2e-39 166.4 185 51.9
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 2.0e-38 163.7 173 54.3
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 3.5e-38 162.9 193 50.3
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 4.6e-38 162.5 122 69.7
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 4.6e-38 162.5 193 50.3
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 6.0e-38 162.2 192 50.0
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.3e-37 160.2 192 51.6
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 2.3e-37 160.2 200 49.5
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 2.3e-37 160.2 192 52.6
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 3.0e-37 159.8 198 50.0
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 3.9e-37 159.5 192 52.6
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 3.9e-37 159.5 162 51.9
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 6.6e-37 158.7 198 51.0
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 6.6e-37 158.7 139 64.0
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 2.5e-36 156.8 109 72.5
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 4.3e-36 156.0 193 50.3
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 9.5e-36 154.8 133 63.2
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 9.5e-36 154.8 184 51.6
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 2.1e-35 153.7 193 48.7
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 3.6e-35 152.9 193 49.2
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 4.7e-35 152.5 132 62.9
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 6.2e-35 152.1 175 49.7
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 6.2e-35 152.1 201 48.3
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 1.1e-34 151.4 132 62.9
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.1e-34 151.4 97 78.4
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 1.4e-34 151.0 108 69.4
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.4e-34 151.0 108 69.4
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 1.8e-34 150.6 105 73.3
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 1.8e-34 150.6 169 53.8
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 2.3e-34 150.2 100 74.0
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 6.8e-34 148.7 108 69.4
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.5e-33 147.5 108 71.3
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.5e-33 147.5 108 71.3
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 2.6e-33 146.7 108 70.4
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 4.4e-33 146.0 191 47.6
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 5.8e-33 145.6 105 71.4
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.3e-32 144.4 164 49.4
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 4.9e-32 142.5 95 73.7
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 4.9e-32 142.5 112 65.2
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 4.9e-32 142.5 94 72.3
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 1.9e-31 140.6 101 71.3
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 1.2e-30 137.9 206 46.1
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 1.7e-29 134.0 190 45.8
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 3.9e-29 132.9 142 54.2
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 6.6e-29 132.1 96 67.7
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 1.5e-28 131.0 108 55.6
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 2.1e-27 127.1 180 45.0
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 3.4e-25 119.8 104 57.7
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 5.8e-25 119.0 104 58.7
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 7.1e-23 112.1 83 69.9
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 1.2e-22 111.3 72 77.8
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 4.6e-22 109.4 106 49.1
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 6.0e-22 109.0 103 57.3
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 2.3e-21 107.1 100 56.0
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 3.0e-21 106.7 83 51.8
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 1.5e-20 104.4 91 59.3
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 4.3e-20 102.8 115 48.7
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 4.7e-19 99.4 107 48.6
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 4.4e-17 92.8 61 70.5
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 9.9e-17 91.7 84 51.2
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 3.1e-10 70.1 97 47.4
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 5.8e-09 65.9 43 72.1
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 1.1e-07 61.6 96 40.6


User provided reference genes

Program Settings