Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003443001 Vitis vinifera HOM05D004481 ORTHO05D005350 1.9e-46 188.7 91 100.0
GSVIVG01030751001 Vitis vinifera HOM05D004481 ORTHO05D005350 2.1e-45 185.3 91 97.8
GSVIVG01003244001 Vitis vinifera HOM05D004481 ORTHO05D005350 4.8e-45 184.1 91 96.7
GSVIVG01030757001 Vitis vinifera HOM05D004481 ORTHO05D005350 3.8e-42 174.5 91 92.3
GSVIVG01037896001 Vitis vinifera HOM05D004481 ORTHO05D005350 3.4e-19 98.2 80 60.0
Sed0018810 Sechium edule HOM05D004481 ORTHO05D005350 9.3e-17 90.1 62 64.5
Potri.001G298500 Populus trichocarpa HOM05D004481 ORTHO05D005350 6.1e-16 87.4 46 80.4
Sabra09G0071800 Salix brachista HOM05D004481 ORTHO05D005350 6.1e-16 87.4 46 80.4
Potri.009G093200 Populus trichocarpa HOM05D004481 ORTHO05D005350 7.9e-16 87.0 61 60.7
MD10G1100100 Malus domestica HOM05D004481 ORTHO05D005350 1.0e-15 86.7 80 53.8
TAR628G0287 Trochodendron aralioides HOM05D004481 ORTHO05D005350 1.4e-15 86.3 80 52.5
Atru.chr5.2445 Acer truncatum HOM05D004481 ORTHO05D005350 2.3e-15 85.5 46 78.3
Cfa004607 Carpinus fangiana HOM05D004481 ORTHO05D005350 2.3e-15 85.5 46 80.4
Dinv42206 Davidia involucrata HOM05D002228 ORTHO05D005350 3.0e-15 85.1 80 51.2
vmacro01990 Vaccinium macrocarpon HOM05D004481 ORTHO05D005350 3.0e-15 85.1 57 64.9
CiPaw.06G168400 Carya illinoinensis HOM05D004481 ORTHO05D005350 3.9e-15 84.7 46 78.3
Manes.07G066500 Manihot esculenta HOM05D004481 ORTHO05D005350 3.9e-15 84.7 46 78.3
PGR142G4205 Punica granatum HOM05D004481 ORTHO05D005350 3.9e-15 84.7 45 77.8
Sed0023236 Sechium edule HOM05D004481 ORTHO05D005350 3.9e-15 84.7 46 78.3
CiPaw.05G013400 Carya illinoinensis HOM05D004481 ORTHO05D005350 5.1e-15 84.3 46 80.4
Prupe.8G137600 Prunus persica HOM05D004481 ORTHO05D005350 6.7e-15 84.0 65 61.5
QL11p032653 Quercus lobata HOM05D004481 ORTHO05D005350 6.7e-15 84.0 64 59.4
RcHm_v2.0_Chr6g0254491 Rosa chinensis HOM05D004481 ORTHO05D005350 8.8e-15 83.6 80 52.5
Ciclev10028970m.g Citrus clementina HOM05D004481 ORTHO05D005350 1.1e-14 83.2 45 77.8
Duzib052G1089 Durio zibethinus HOM05D004481 ORTHO05D005350 1.5e-14 82.8 45 77.8
Gohir.A12G021100 Gossypium hirsutum HOM05D004481 ORTHO05D005350 1.5e-14 82.8 45 77.8
Gohir.D12G021400 Gossypium hirsutum HOM05D004481 ORTHO05D005350 1.5e-14 82.8 45 77.8
Gorai.008G021700 Gossypium raimondii HOM05D004481 ORTHO05D005350 1.5e-14 82.8 45 77.8
Rhsim11G0156300 Rhododendron simsii HOM05D004481 ORTHO05D005350 1.5e-14 82.8 80 50.0
Thecc.02G111500 Theobroma cacao HOM05D004481 ORTHO05D005350 1.5e-14 82.8 45 77.8
ClCG02G006560 Citrullus lanatus HOM05D004481 ORTHO05D005350 1.9e-14 82.4 80 51.2
FvH4_2g04780 Fragaria vesca HOM05D004481 ORTHO05D005350 2.5e-14 82.0 61 60.7
FAN15G0583 Fragaria x ananassa HOM05D004481 ORTHO05D005350 2.5e-14 82.0 61 60.7
FAN24G0473 Fragaria x ananassa HOM05D004481 ORTHO05D005350 2.5e-14 82.0 61 60.7
FAN27G3202 Fragaria x ananassa HOM05D004481 ORTHO05D005350 2.5e-14 82.0 61 60.7
Lj5A215G63 Lonicera japonica HOM05D004481 ORTHO05D005350 2.5e-14 82.0 61 63.9
TAR376G0836 Trochodendron aralioides HOM05D004481 ORTHO05D005350 2.5e-14 82.0 46 76.1
MSTRG.20195 Avicennia marina HOM05D004481 ORTHO05D005350 3.3e-14 81.6 61 57.4
CSS0002878 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 3.3e-14 81.6 61 60.7
CSS0015264 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 3.3e-14 81.6 61 60.7
DCAR_021976 Daucus carota HOM05D004481 ORTHO05D005350 3.3e-14 81.6 45 75.6
ECA234G2632 Erigeron canadensis HOM05D004481 ORTHO05D005350 3.3e-14 81.6 82 48.8
PSO210G1902 Papaver somniferum HOM05D004481 ORTHO05D005350 3.3e-14 81.6 46 76.1
CsaV3_7G008050 Cucumis sativus L. HOM05D004481 ORTHO05D005350 4.3e-14 81.3 46 78.3
PSO170G4403 Papaver somniferum HOM05D004481 ORTHO05D005350 4.3e-14 81.3 46 73.9
Solyc10g049850.3 Solanum lycopersicum HOM05D004481 ORTHO05D005350 4.3e-14 81.3 118 40.7
CANSAT25G3441 Cannabis sativa HOM05D004481 ORTHO05D005350 5.7e-14 80.9 46 73.9
MELO3C018500.2 Cucumis melo HOM05D004481 ORTHO05D005350 7.4e-14 80.5 46 78.3
Sc18g0005550 Simmondsia chinensis HOM05D004481 ORTHO05D005350 7.4e-14 80.5 61 60.7
CANSAT25G2190 Cannabis sativa HOM05D004481 ORTHO05D005350 9.7e-14 80.1 46 73.9
Aqoxy5G01130 Aquilegia oxysepala HOM05D004481 ORTHO05D005350 1.3e-13 79.7 46 71.7
Nitab4.5_0001480g0100 Nicotiana tabacum HOM05D004481 ORTHO05D005350 1.3e-13 79.7 82 46.3
TWI75G0922 Tripterygium wilfordii HOM05D004481 ORTHO05D005350 1.3e-13 79.7 46 76.1
TWI79G1728 Tripterygium wilfordii HOM05D004481 ORTHO05D005350 1.3e-13 79.7 46 71.7
Nitab4.5_0003699g0050 Nicotiana tabacum HOM05D004481 ORTHO05D005350 1.7e-13 79.3 82 46.3
Cpa.g.sc106.118 Carica papaya HOM05D004481 ORTHO05D005350 2.2e-13 79.0 61 62.3
Lj5g0012751 Lotus japonicus HOM05D004481 ORTHO05D005350 2.8e-13 78.6 46 71.7
SalBow6G4388 Salvia bowleyana HOM05D004481 ORTHO05D005350 3.7e-13 78.2 61 57.4
SalBow6G4779 Salvia bowleyana HOM05D004481 ORTHO05D005350 3.7e-13 78.2 61 57.4
CAN.G606.21 Capsicum annuum HOM05D004481 ORTHO05D005350 4.8e-13 77.8 82 45.1
Phvul.007G041700 Phaseolus vulgaris HOM05D004481 ORTHO05D005350 4.8e-13 77.8 46 71.7
CSS0003948 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 6.3e-13 77.4 45 75.6
Glyma.20G130700 Glycine max HOM05D004481 ORTHO05D005350 6.3e-13 77.4 46 71.7
arahy.Tifrunner.gnm1.ann1.5RC8JY Arachis hypogaea HOM05D004481 ORTHO05D005350 8.2e-13 77.0 45 73.3
arahy.Tifrunner.gnm1.ann1.PGW4NS Arachis hypogaea HOM05D004481 ORTHO05D005350 8.2e-13 77.0 45 73.3
Eucgr.I01088 Eucalyptus grandis HOM05D004481 ORTHO05D005350 8.2e-13 77.0 46 73.9
Hma1.2p1_1023F.1_g248990 Hydrangea macrophylla HOM05D004481 ORTHO05D005350 8.2e-13 77.0 46 69.6
Hma1.2p1_1023F.1_g249000 Hydrangea macrophylla HOM05D004481 ORTHO05D005350 8.2e-13 77.0 46 69.6
Actinidia27975 Actinidia chinensis HOM05D004481 ORTHO05D005350 1.1e-12 76.6 45 75.6
SEGI_10030 Sequoiadendron giganteum HOM05D004481 ORTHO05D005350 1.1e-12 76.6 47 72.3
PGSC0003DMG400025761 Solanum tuberosum HOM05D004481 ORTHO05D005350 1.1e-12 76.6 82 45.1
Migut.B00402 Erythranthe guttata HOM05D004481 ORTHO05D005350 1.4e-12 76.3 61 57.4
Glyma.10G260500 Glycine max HOM05D004481 ORTHO05D005350 1.4e-12 76.3 46 69.6
TPR.G27083 Trifolium pratense HOM05D004481 ORTHO05D005350 1.4e-12 76.3 45 71.1
unitig_0.g879 Utricularia gibba HOM05D004481 ORTHO05D005350 1.4e-12 76.3 45 73.3
Medtr1g107045 Medicago truncatula HOM05D004481 ORTHO05D005350 1.8e-12 75.9 46 67.4
THA.LOC104819549 Tarenaya hassleriana HOM05D004481 ORTHO05D005350 1.8e-12 75.9 46 69.6
CSS0013759 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 2.4e-12 75.5 61 57.4
VMungo0720G1503 Vigna mungo HOM05D004481 ORTHO05D005350 2.4e-12 75.5 46 67.4
AUR62010332 Chenopodium quinoa HOM05D004481 ORTHO05D005350 3.1e-12 75.1 46 65.2
SHI05271 Sapria himalayana HOM05D004481 ORTHO05D005350 3.1e-12 75.1 45 68.9
Zm00001eb214380 Zea mays HOM05D004481 ORTHO05D005350 3.1e-12 75.1 47 72.3
Oeu037260.1 Olea europaea HOM05D004481 ORTHO05D005350 5.3e-12 74.3 45 73.3
Lsat_1_v5_gn_5_116421 Lactuca sativa HOM05D004481 ORTHO05D005350 6.9e-12 73.9 45 66.7
Lalb_Chr02g0145211 Lupinus albus HOM05D004481 ORTHO05D005350 6.9e-12 73.9 45 71.1
Psat6g216600 Pisum sativum HOM05D004481 ORTHO05D005350 6.9e-12 73.9 46 65.2
Cc02_g19430 Coffea canephora HOM05D004481 ORTHO05D005350 9.1e-12 73.6 46 67.4
Thhalv10025895m.g Eutrema salsugineum HOM05D004481 ORTHO05D005350 9.1e-12 73.6 46 67.4
Os03g0760600 Oryza sativa ssp. japonica HOM05D004481 ORTHO05D005350 9.1e-12 73.6 46 73.9
Sp7g32060 Schrenkiella parvula HOM05D004481 ORTHO05D005350 9.1e-12 73.6 46 67.4
Lalb_Chr21g0308241 Lupinus albus HOM05D004481 ORTHO05D005350 1.2e-11 73.2 45 73.3
Nn5g30459 Nelumbo nucifera HOM05D004481 ORTHO05D005350 1.2e-11 73.2 45 71.1
HanXRQChr04g0105981 Helianthus annuus HOM05D004481 ORTHO05D005350 1.5e-11 72.8 61 54.1
Nitab4.5_0002647g0020 Nicotiana tabacum HOM05D004481 ORTHO05D005350 2.0e-11 72.4 46 67.4
SGA_v2.0_scaffold225G42995 Striga asiatica HOM05D004481 ORTHO05D005350 2.0e-11 72.4 46 67.4
BcaNung04989 Brassica carinata HOM05D004481 ORTHO05D005350 3.4e-11 71.6 79 44.3
Carub.0007s0609 Capsella rubella HOM05D004481 ORTHO05D005350 3.4e-11 71.6 45 68.9
Nn1g04655 Nelumbo nucifera HOM05D004481 ORTHO05D005350 3.4e-11 71.6 45 71.1
Aa31LG2G16850 Aethionema arabicum HOM05D004481 ORTHO05D005350 4.5e-11 71.2 46 67.4
THA.LOC104807234 Tarenaya hassleriana HOM05D004481 ORTHO05D005350 4.5e-11 71.2 46 65.2
A01p04140 Brassica napus HOM05D004481 ORTHO05D005350 5.9e-11 70.9 79 44.3
C01p04510 Brassica napus HOM05D004481 ORTHO05D005350 5.9e-11 70.9 79 44.3
BolC1t00437H Brassica oleracea HOM05D004481 ORTHO05D005350 5.9e-11 70.9 79 44.3
BraA01t00403Z Brassica rapa HOM05D004481 ORTHO05D005350 5.9e-11 70.9 79 44.3
Ca_11058_v3 Cicer arietinum L. HOM05D004481 ORTHO05D005350 5.9e-11 70.9 46 63.0
Sopen10g019880 Solanum pennellii HOM05D004481 ORTHO05D005350 7.7e-11 70.5 46 67.4
PGSC0003DMG400023263 Solanum tuberosum HOM05D004481 ORTHO05D005350 7.7e-11 70.5 46 67.4
AL7G17000 Arabidopsis lyrata HOM05D004481 ORTHO05D005350 1.0e-10 70.1 45 68.9
AT4G34270 Arabidopsis thaliana HOM05D004481 ORTHO05D005350 1.3e-10 69.7 45 68.9
BcaNung04988 Brassica carinata HOM05D004481 ORTHO05D005350 1.7e-10 69.3 46 65.2
CARHR242510 Cardamine hirsuta HOM05D004481 ORTHO05D005350 1.7e-10 69.3 46 65.2
AagrBONN_evm.TU.Sc2ySwM_228.2403 Anthoceros agrestis HOM05D004481 ORTHO05D005350 2.2e-10 68.9 47 63.8
CDE02G3699 Ceratophyllum demersum HOM05D004481 ORTHO05D005350 2.2e-10 68.9 63 52.4
ATR0661G316 Amborella trichopoda HOM05D004481 ORTHO05D005350 2.9e-10 68.6 81 50.6
Pp3c10_18670 Physcomitrium patens HOM05D004481 ORTHO05D005350 2.9e-10 68.6 47 63.8
SMO361G0327 Selaginella moellendorffii HOM05D004481 ORTHO05D005350 6.5e-10 67.4 47 68.1
Mapoly0064s0080 Marchantia polymorpha HOM05D004481 ORTHO05D005350 1.9e-09 65.9 47 63.8
CBR_g36716 Chara braunii HOM05D004481 ORTHO05D005350 2.1e-08 62.4 39 69.2
Rhsim11G0157800 Rhododendron simsii HOM05D004481 ORTHO05D005350 6.7e-07 57.4 64 45.3
PRCOL_00000955 Prasinoderma coloniale HOM05D004481 ORTHO05D005350 1.1e-06 56.6 34 67.6
FAN20G2321 Fragaria x ananassa HOM05D004481 ORTHO05D005350 2.0e-06 55.8 45 55.6
MD00G1108800 Malus domestica HOM05D004481 ORTHO05D005350 4.4e-06 54.7 28 85.7
Peaxi162Scf00016g02527 Petunia axillaris HOM05D004481 ORTHO05D005350 7.4e-06 53.9 84 36.9


User provided reference genes

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