Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 1.0e-114 416.8 211 100.0
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 1.0e-114 416.8 211 100.0
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 4.4e-110 401.4 211 94.3
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 3.2e-108 395.2 209 94.3
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 4.1e-108 394.8 210 93.3
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 5.4e-108 394.4 211 91.5
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 9.2e-108 393.7 207 93.7
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 9.2e-108 393.7 211 92.4
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 9.2e-108 393.7 211 92.4
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 1.2e-107 393.3 209 92.3
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 1.6e-107 392.9 207 93.2
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 1.6e-107 392.9 211 92.9
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 2.0e-107 392.5 211 92.4
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 2.0e-107 392.5 211 91.9
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 2.7e-107 392.1 211 92.9
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 2.7e-107 392.1 209 93.8
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 2.7e-107 392.1 211 91.5
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 2.7e-107 392.1 209 93.3
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 4.5e-107 391.3 211 91.0
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 4.5e-107 391.3 210 91.4
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 4.5e-107 391.3 212 92.9
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 4.5e-107 391.3 210 91.9
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 5.9e-107 391.0 211 91.0
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 7.8e-107 390.6 211 92.9
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 7.8e-107 390.6 211 92.4
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 1.0e-106 390.2 209 92.3
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 1.3e-106 389.8 211 91.0
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 1.7e-106 389.4 211 92.4
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 2.3e-106 389.0 209 92.8
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 2.9e-106 388.7 211 91.5
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 2.9e-106 388.7 209 91.9
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 3.9e-106 388.3 211 91.0
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 5.0e-106 387.9 210 92.4
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 5.0e-106 387.9 210 92.4
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 6.6e-106 387.5 209 92.3
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 6.6e-106 387.5 209 91.4
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 8.6e-106 387.1 209 90.4
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 1.1e-105 386.7 211 90.5
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 1.1e-105 386.7 211 90.0
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 1.1e-105 386.7 209 90.9
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 1.1e-105 386.7 209 90.9
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 1.5e-105 386.3 211 90.0
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 1.9e-105 386.0 211 90.0
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 2.5e-105 385.6 211 90.0
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 3.3e-105 385.2 211 89.1
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 3.3e-105 385.2 209 89.5
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 3.3e-105 385.2 208 91.3
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 3.3e-105 385.2 211 89.1
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 4.3e-105 384.8 209 90.4
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 4.3e-105 384.8 211 89.6
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 4.3e-105 384.8 211 89.1
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 4.3e-105 384.8 211 89.1
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 5.6e-105 384.4 211 91.5
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 5.6e-105 384.4 211 91.5
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 5.6e-105 384.4 209 90.0
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 7.3e-105 384.0 209 91.9
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 7.3e-105 384.0 209 90.4
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 7.3e-105 384.0 210 90.0
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 9.5e-105 383.6 209 89.5
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 9.5e-105 383.6 209 89.5
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 9.5e-105 383.6 211 91.5
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 9.5e-105 383.6 210 89.0
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 9.5e-105 383.6 208 90.9
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 9.5e-105 383.6 208 90.9
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 1.2e-104 383.3 209 90.9
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.2e-104 383.3 211 91.0
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.2e-104 383.3 211 91.0
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 1.0e-103 380.2 211 88.2
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 2.3e-103 379.0 209 89.5
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 3.1e-103 378.6 211 90.0
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 6.8e-103 377.5 211 88.6
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 6.8e-103 377.5 211 88.6
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 6.8e-103 377.5 211 88.2
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 6.8e-103 377.5 211 87.7
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 6.8e-103 377.5 214 87.4
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 8.9e-103 377.1 211 88.6
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 8.9e-103 377.1 211 88.2
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 1.2e-102 376.7 211 88.2
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 1.5e-102 376.3 211 87.7
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 2.0e-102 375.9 208 88.5
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 2.6e-102 375.6 211 88.2
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 4.4e-102 374.8 209 88.0
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 5.8e-102 374.4 211 87.7
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 7.5e-102 374.0 209 90.0
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 9.8e-102 373.6 209 86.1
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 1.3e-101 373.2 211 87.2
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 1.3e-101 373.2 211 87.2
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 1.7e-101 372.9 211 87.7
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 1.7e-101 372.9 211 87.2
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 2.9e-101 372.1 211 85.8
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 2.9e-101 372.1 211 86.3
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 2.9e-101 372.1 211 86.7
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 2.9e-101 372.1 211 86.3
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 2.9e-101 372.1 211 86.7
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 2.9e-101 372.1 211 86.3
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 2.9e-101 372.1 211 86.3
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 3.7e-101 371.7 209 86.6
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 3.7e-101 371.7 211 86.7
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 4.9e-101 371.3 250 78.8
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 6.4e-101 370.9 211 85.8
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 6.4e-101 370.9 211 87.2
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 6.4e-101 370.9 231 82.7
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 8.3e-101 370.5 211 85.3
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 8.3e-101 370.5 211 85.8
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 1.1e-100 370.2 211 85.8
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 1.4e-100 369.8 211 85.8
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 1.9e-100 369.4 211 85.8
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 1.9e-100 369.4 211 85.8
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 2.4e-100 369.0 199 91.0
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 2.4e-100 369.0 195 93.3
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 4.1e-100 368.2 209 85.6
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 4.1e-100 368.2 212 86.3
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 4.1e-100 368.2 211 85.8
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 4.1e-100 368.2 209 86.6
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 4.1e-100 368.2 212 86.3
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 4.1e-100 368.2 212 86.3
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 5.4e-100 367.9 211 84.8
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 1.6e-99 366.3 212 85.8
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 2.7e-99 365.5 211 84.8
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 2.7e-99 365.5 251 75.7
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 3.9e-98 361.7 225 82.2
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 5.0e-98 361.3 212 84.4
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 5.0e-98 361.3 212 84.4
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 6.6e-98 360.9 211 84.4
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 8.6e-98 360.5 211 83.4
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 1.9e-97 359.4 212 84.4
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 1.9e-97 359.4 211 82.5
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 5.6e-97 357.8 212 84.9
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 1.4e-95 353.2 215 82.3
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 7.5e-94 347.4 209 81.8
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 1.7e-93 346.3 217 78.8
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 2.2e-93 345.9 208 81.7
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 3.7e-93 345.1 298 63.4
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 6.4e-93 344.4 215 79.1
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 1.6e-91 339.7 215 77.7
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 2.7e-91 339.0 208 79.8
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 3.3e-89 332.0 230 76.5
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 5.6e-89 331.3 344 55.2
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 5.4e-84 314.7 177 88.1
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 7.1e-84 314.3 318 57.2
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.2e-83 313.5 163 94.5
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.9e-81 306.2 165 92.1
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.2e-78 297.0 195 79.0
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 5.8e-78 294.7 178 83.7
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 9.3e-76 287.3 177 80.8
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 9.9e-70 267.3 159 85.5
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 3.6e-64 248.8 143 86.0
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 5.8e-62 241.5 136 86.8
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 1.3e-61 240.4 136 86.8
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 3.4e-54 215.7 203 57.6
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 2.5e-52 209.5 210 50.5
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 1.4e-44 183.7 102 88.2
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 3.9e-42 175.6 97 89.7
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 4.3e-41 172.2 102 80.4
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 5.7e-41 171.8 188 46.8
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 1.4e-39 167.2 205 45.9
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.1e-36 157.5 165 56.4
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 6.3e-32 141.7 110 69.1
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 4.5e-30 135.6 139 56.1
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 3.9e-26 122.5 84 72.6
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 2.8e-24 116.3 83 69.9
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 2.4e-23 113.2 163 46.6
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 2.5e-20 103.2 100 50.0
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 5.7e-17 92.0 122 44.3
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 4.8e-16 89.0 51 82.4
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 1.2e-14 84.3 46 84.8
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 2.5e-12 76.6 79 57.0
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 3.6e-11 72.8 46 71.7
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 6.1e-11 72.0 38 86.8
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 4.8e-08 62.4 133 36.1
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 1.1e-07 61.2 46 60.9
A05p11440 Brassica napus HOM05D003856 ORTHO05D004547 7.0e-07 58.5 36 75.0
BraA05t20093Z Brassica rapa HOM05D003856 ORTHO05D004547 7.0e-07 58.5 36 75.0
C04p14930 Brassica napus HOM05D003856 ORTHO05D004547 2.0e-06 57.0 36 72.2


User provided reference genes

Program Settings