Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 3.5e-98 361.7 194 100.0
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 7.7e-69 264.2 201 68.7
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 8.5e-68 260.8 181 71.3
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 4.2e-67 258.5 203 68.5
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 9.4e-67 257.3 178 72.5
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 2.7e-66 255.8 176 71.6
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 3.6e-66 255.4 168 73.2
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 1.8e-65 253.1 174 73.6
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 4.0e-65 251.9 170 71.2
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 4.0e-65 251.9 170 71.2
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 6.8e-65 251.1 193 69.9
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 8.8e-65 250.8 174 73.6
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 1.2e-64 250.4 175 71.4
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 2.6e-64 249.2 200 65.5
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 7.5e-64 247.7 169 71.6
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 9.8e-64 247.3 194 67.0
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 1.3e-63 246.9 200 67.0
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 1.3e-63 246.9 169 71.6
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 2.2e-63 246.1 200 65.5
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 2.8e-63 245.7 193 67.4
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 2.8e-63 245.7 169 71.0
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 3.7e-63 245.4 170 68.2
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 4.8e-63 245.0 202 64.4
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 6.3e-63 244.6 172 71.5
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 8.3e-63 244.2 172 73.3
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 1.1e-62 243.8 174 71.3
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 1.1e-62 243.8 172 73.3
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 3.1e-62 242.3 169 69.8
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 5.4e-62 241.5 174 72.4
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 9.1e-62 240.7 172 72.1
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 1.2e-61 240.4 169 72.8
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 1.2e-61 240.4 175 70.9
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 2.0e-61 239.6 180 65.0
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 2.7e-61 239.2 178 70.2
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 2.7e-61 239.2 172 72.7
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 7.7e-61 237.7 178 69.1
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.0e-60 237.3 169 69.8
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 1.7e-60 236.5 177 68.4
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 2.2e-60 236.1 177 65.0
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 2.9e-60 235.7 179 66.5
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 5.0e-60 235.0 178 66.3
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 5.0e-60 235.0 248 54.4
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 1.5e-59 233.4 177 63.8
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 2.5e-59 232.6 178 65.7
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 5.5e-59 231.5 179 65.4
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 5.5e-59 231.5 172 69.8
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 7.2e-59 231.1 175 64.0
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 7.2e-59 231.1 172 68.6
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 9.4e-59 230.7 178 64.6
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.2e-58 230.3 178 65.2
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 2.1e-58 229.6 174 67.8
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 4.7e-58 228.4 172 68.0
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 6.1e-58 228.0 179 63.1
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 4.0e-57 225.3 177 65.5
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 5.2e-57 224.9 193 61.1
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 6.8e-57 224.6 169 66.3
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 3.4e-56 222.2 180 63.9
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 4.4e-56 221.9 181 61.9
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 7.5e-56 221.1 194 60.3
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 9.8e-56 220.7 193 60.6
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 6.3e-55 218.0 193 59.1
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 1.8e-54 216.5 179 62.0
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 1.8e-54 216.5 177 60.5
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 5.4e-54 214.9 179 62.0
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 5.4e-54 214.9 169 65.7
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 1.2e-53 213.8 179 61.5
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 2.7e-53 212.6 173 61.3
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 5.9e-53 211.5 179 60.9
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 1.0e-52 210.7 169 62.1
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 1.0e-52 210.7 177 59.9
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 1.3e-52 210.3 179 62.6
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 1.7e-52 209.9 172 64.5
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 2.3e-52 209.5 169 62.1
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 1.1e-51 207.2 175 61.1
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 1.9e-51 206.5 181 59.1
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 4.3e-51 205.3 200 54.5
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 3.6e-50 202.2 181 58.0
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 3.7e-47 192.2 177 60.5
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 6.4e-47 191.4 170 58.8
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 8.3e-47 191.0 164 60.4
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 8.3e-47 191.0 174 57.5
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 1.8e-46 189.9 174 57.5
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 9.2e-46 187.6 170 57.1
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 2.0e-45 186.4 159 59.1
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 4.6e-45 185.3 176 58.0
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 1.0e-44 184.1 170 59.4
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 6.6e-44 181.4 167 57.5
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 7.3e-43 177.9 167 56.3
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 7.3e-43 177.9 170 55.9
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 1.2e-42 177.2 170 55.3
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 1.6e-42 176.8 170 56.5
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 1.8e-41 173.3 171 55.6
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 4.0e-41 172.2 171 55.0
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 6.8e-41 171.4 169 55.6
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 2.6e-40 169.5 170 54.7
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 5.8e-40 168.3 179 49.7
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 9.8e-40 167.5 170 55.9
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 9.8e-40 167.5 170 57.1
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 9.8e-40 167.5 170 57.1
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 9.8e-40 167.5 158 56.3
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 1.7e-39 166.8 170 55.9
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 3.7e-39 165.6 194 50.5
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 4.9e-39 165.2 170 55.9
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 1.2e-37 160.6 166 53.6
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 5.0e-36 155.2 118 66.1
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 2.3e-33 146.4 127 61.4
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 8.9e-33 144.4 85 80.0
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 1.2e-32 144.1 182 43.4
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 1.9e-30 136.7 170 50.0
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 3.5e-29 132.5 86 73.3
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 2.3e-20 103.2 99 59.6
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 2.4e-17 93.2 184 35.3
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 2.0e-16 90.1 171 33.9
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 1.7e-15 87.0 190 32.6
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 1.5e-11 73.9 113 36.3
Ca_19566_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 1.5e-08 63.9 39 71.8


User provided reference genes

Program Settings