Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003209001 Vitis vinifera HOM05D007781 ORTHO05D009769 1.5e-58 229.6 142 100.0
Dinv40553 Davidia involucrata HOM05D007781 ORTHO05D009769 1.9e-24 116.3 93 88.2
Hma1.2p1_0126F.1_g059410 Hydrangea macrophylla HOM05D007781 ORTHO05D009769 5.5e-24 114.8 102 83.3
Ciclev10017149m.g Citrus clementina HOM05D007781 ORTHO05D009769 9.4e-24 114.0 103 79.6
TAR627G0113 Trochodendron aralioides HOM05D007781 ORTHO05D009769 1.2e-21 107.1 86 90.7
MD05G1313200 Malus domestica HOM05D007781 ORTHO05D009769 1.5e-21 106.7 88 88.6
MD10G1295400 Malus domestica HOM05D007781 ORTHO05D009769 3.4e-21 105.5 88 87.5
Duzib235G1462 Durio zibethinus HOM05D007781 ORTHO05D009769 4.4e-21 105.1 100 78.0
Thecc.06G188400 Theobroma cacao HOM05D007781 ORTHO05D009769 4.4e-21 105.1 91 82.4
Gorai.009G169900 Gossypium raimondii HOM05D007781 ORTHO05D009769 1.3e-20 103.6 110 70.0
Gohir.A05G161900 Gossypium hirsutum HOM05D007781 ORTHO05D009769 2.8e-20 102.4 94 78.7
Gohir.D05G164700 Gossypium hirsutum HOM05D007781 ORTHO05D009769 2.8e-20 102.4 94 78.7
FvH4_3g09310 Fragaria vesca HOM05D007781 ORTHO05D009769 2.4e-19 99.4 87 86.2
FAN11G2776 Fragaria x ananassa HOM05D007781 ORTHO05D009769 2.4e-19 99.4 87 86.2
FAN21G0375 Fragaria x ananassa HOM05D007781 ORTHO05D009769 2.4e-19 99.4 87 86.2
Lj4g0009430 Lotus japonicus HOM05D007781 ORTHO05D009769 2.4e-19 99.4 93 80.6
CsaV3_1G012280 Cucumis sativus L. HOM05D007781 ORTHO05D009769 3.1e-19 99.0 107 72.9
COL.COLO4_31480 Corchorus olitorius HOM05D007781 ORTHO05D009769 4.1e-19 98.6 91 75.8
FAN16G0963 Fragaria x ananassa HOM05D007781 ORTHO05D009769 4.1e-19 98.6 94 79.8
Glyma.07G196200 Glycine max HOM05D007781 ORTHO05D009769 4.1e-19 98.6 93 79.6
Prupe.4G046600 Prunus persica HOM05D007781 ORTHO05D009769 4.1e-19 98.6 103 74.8
ClCG03G006020 Citrullus lanatus HOM05D007781 ORTHO05D009769 5.4e-19 98.2 106 74.5
RcHm_v2.0_Chr5g0008291 Rosa chinensis HOM05D007781 ORTHO05D009769 7.0e-19 97.8 91 81.3
CDE10G1000 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 9.1e-19 97.4 91 80.2
Manes.16G027000 Manihot esculenta HOM05D007781 ORTHO05D009769 1.6e-18 96.7 90 82.2
Sed0016416 Sechium edule HOM05D007781 ORTHO05D009769 1.6e-18 96.7 91 81.3
CiPaw.09G059400 Carya illinoinensis HOM05D007781 ORTHO05D009769 2.7e-18 95.9 87 85.1
MELO3C002600.2 Cucumis melo HOM05D007781 ORTHO05D009769 2.7e-18 95.9 92 80.4
Psat7g113680 Pisum sativum HOM05D007781 ORTHO05D009769 2.7e-18 95.9 92 79.3
Phvul.002G234100 Phaseolus vulgaris HOM05D007781 ORTHO05D009769 5.9e-18 94.7 97 72.2
PGR042G1810 Punica granatum HOM05D007781 ORTHO05D009769 5.9e-18 94.7 104 76.0
Sp7g19740 Schrenkiella parvula HOM05D007781 ORTHO05D009769 7.7e-18 94.4 104 74.0
Cc02_g13310 Coffea canephora HOM05D007781 ORTHO05D009769 1.0e-17 94.0 97 75.3
TPR.G12128 Trifolium pratense HOM05D007781 ORTHO05D009769 1.3e-17 93.6 92 78.3
A08p15070 Brassica napus HOM05D007781 ORTHO05D009769 8.6e-17 90.9 103 72.8
Actinidia05631 Actinidia chinensis HOM05D007781 ORTHO05D009769 1.1e-16 90.5 88 81.8
Nitab4.5_0003432g0040 Nicotiana tabacum HOM05D007781 ORTHO05D009769 1.1e-16 90.5 89 77.5
Thhalv10026412m.g Eutrema salsugineum HOM05D007781 ORTHO05D009769 1.5e-16 90.1 106 70.8
Nitab4.5_0007940g0030 Nicotiana tabacum HOM05D007781 ORTHO05D009769 1.5e-16 90.1 97 74.2
Sc17g0006220 Simmondsia chinensis HOM05D007781 ORTHO05D009769 1.5e-16 90.1 97 74.2
Haze_06475 Corylus avellana HOM05D007781 ORTHO05D009769 1.9e-16 89.7 90 77.8
Potri.004G043100 Populus trichocarpa HOM05D007781 ORTHO05D009769 2.5e-16 89.4 88 79.5
Aa31LG6G3610 Aethionema arabicum HOM05D007781 ORTHO05D009769 3.3e-16 89.0 106 69.8
CANSAT35G1759 Cannabis sativa HOM05D007781 ORTHO05D009769 3.3e-16 89.0 90 77.8
Eucgr.E03314 Eucalyptus grandis HOM05D007781 ORTHO05D009769 3.3e-16 89.0 94 72.3
Nn1g06568 Nelumbo nucifera HOM05D007781 ORTHO05D009769 4.2e-16 88.6 98 75.5
VMungo0251G3178 Vigna mungo HOM05D007781 ORTHO05D009769 4.2e-16 88.6 90 73.3
C03p83160 Brassica napus HOM05D001541 ORTHO05D009769 7.2e-16 87.8 96 76.0
HPP92_027869 Vanilla planifolia HOM05D007781 ORTHO05D009769 7.2e-16 87.8 90 73.3
Sabra04G0026700 Salix brachista HOM05D007781 ORTHO05D009769 9.5e-16 87.4 88 77.3
MSTRG.14698 Avicennia marina HOM05D007781 ORTHO05D009769 1.2e-15 87.0 104 70.2
THA.LOC104812795 Tarenaya hassleriana HOM05D007781 ORTHO05D009769 2.1e-15 86.3 87 79.3
CDE10G0168 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 3.6e-15 85.5 94 73.4
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 4.7e-15 85.1 106 67.9
BolC3t20599H Brassica oleracea HOM05D007781 ORTHO05D009769 4.7e-15 85.1 106 67.9
PGSC0003DMG400029720 Solanum tuberosum HOM05D007781 ORTHO05D009769 4.7e-15 85.1 86 79.1
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 1.0e-14 84.0 96 74.0
Oeu053970.1 Olea europaea HOM05D007781 ORTHO05D009769 1.8e-14 83.2 91 70.3
CAN.G1164.27 Capsicum annuum HOM05D007781 ORTHO05D009769 3.0e-14 82.4 86 77.9
CARHR228320 Cardamine hirsuta HOM05D007781 ORTHO05D009769 4.0e-14 82.0 98 69.4
Lsat_1_v5_gn_7_21141 Lactuca sativa HOM05D007781 ORTHO05D009769 4.0e-14 82.0 99 70.7
Sopen02g023130 Solanum pennellii HOM05D007781 ORTHO05D009769 4.0e-14 82.0 86 77.9
Hund21227 Selenicereus undatus HOM05D007781 ORTHO05D009769 5.2e-14 81.6 86 77.9
Medtr4g088850 Medicago truncatula HOM05D007781 ORTHO05D009769 8.9e-14 80.9 75 86.7
SGA_v2.0_scaffold49G18292 Striga asiatica HOM05D007781 ORTHO05D009769 1.5e-13 80.1 104 65.4
arahy.Tifrunner.gnm1.ann1.KV0YZV Arachis hypogaea HOM05D007781 ORTHO05D009769 2.0e-13 79.7 87 75.9
arahy.Tifrunner.gnm1.ann1.QC0LUE Arachis hypogaea HOM05D007781 ORTHO05D009769 2.0e-13 79.7 87 75.9
AT4G21610 Arabidopsis thaliana HOM05D007781 ORTHO05D009769 3.4e-13 79.0 97 71.1
AL7G32390 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.4e-13 78.6 97 70.1
Lalb_Chr16g0383721 Lupinus albus HOM05D007781 ORTHO05D009769 5.7e-13 78.2 83 77.1
Migut.H01490 Erythranthe guttata HOM05D007781 ORTHO05D009769 7.5e-13 77.8 94 71.3
Carub.0007s1977 Capsella rubella HOM05D007781 ORTHO05D009769 2.2e-12 76.3 97 69.1
Solyc02g078270.3 Solanum lycopersicum HOM05D007781 ORTHO05D009769 2.2e-12 76.3 86 74.4
DCAR_028076 Daucus carota HOM05D007781 ORTHO05D009769 2.8e-12 75.9 41 80.5
Aqoxy1G02434 Aquilegia oxysepala HOM05D007781 ORTHO05D009769 1.1e-11 73.9 93 68.8
TWI38G0207 Tripterygium wilfordii HOM05D007781 ORTHO05D009769 3.1e-11 72.4 40 77.5
HanXRQChr04g0124061 Helianthus annuus HOM05D007781 ORTHO05D009769 1.2e-10 70.5 94 69.1
Os01g0612700 Oryza sativa ssp. japonica HOM05D021202 ORTHO05D009769 1.6e-10 70.1 130 53.8
unitig_744.g24534 Utricularia gibba HOM05D007781 ORTHO05D009769 1.6e-10 70.1 119 54.6
Ah.14g089440 Amaranthus hybridus HOM05D007781 ORTHO05D009769 2.0e-10 69.7 36 80.6
ECA236G0601 Erigeron canadensis HOM05D007781 ORTHO05D009769 2.0e-10 69.7 115 60.9
Peaxi162Scf00736g00429 Petunia axillaris HOM05D007781 ORTHO05D009769 2.0e-10 69.7 39 74.4
SHI01775 Sapria himalayana HOM05D007781 ORTHO05D009769 5.9e-10 68.2 42 71.4
CSS0040858 Camellia sinensis var. sinensis HOM05D007781 ORTHO05D009769 1.3e-09 67.0 40 70.0
PSO541G0656 Papaver somniferum HOM05D007781 ORTHO05D009769 2.3e-09 66.2 86 67.4
PSO675G6168 Papaver somniferum HOM05D007781 ORTHO05D009769 5.0e-09 65.1 86 67.4
Gohir.A11G117400 Gossypium hirsutum HOM05D007781 ORTHO05D009769 6.6e-09 64.7 53 54.7
vmacro14163 Vaccinium macrocarpon HOM05D007781 ORTHO05D009769 3.3e-08 62.4 45 60.0
Sed0017721 Sechium edule HOM05D007781 ORTHO05D009769 1.6e-07 60.1 78 71.8
MELO3C007039.2 Cucumis melo HOM05D002138 ORTHO05D002106 6.1e-07 58.2 84 60.7
HanXRQChr12g0358431 Helianthus annuus HOM05D002138 ORTHO05D002106 2.3e-06 56.2 84 61.9
TAR627G0773 Trochodendron aralioides HOM05D002138 ORTHO05D002106 2.3e-06 56.2 86 62.8
vmacro00338 Vaccinium macrocarpon HOM05D007781 ORTHO05D002106 2.3e-06 56.2 40 57.5


User provided reference genes

Program Settings