Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003189001 Vitis vinifera HOM05D006195 ORTHO05D007710 6.6e-81 303.9 145 100.0
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 2.0e-69 265.8 132 94.7
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 6.8e-54 214.2 138 72.5
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 8.9e-54 213.8 142 72.5
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 1.3e-52 209.9 138 70.3
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 2.2e-52 209.1 142 70.4
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 4.9e-52 208.0 142 70.4
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 6.4e-52 207.6 141 70.2
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 1.4e-51 206.5 141 70.9
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 1.4e-51 206.5 127 72.4
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 3.2e-51 205.3 127 74.0
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 4.1e-51 204.9 139 71.9
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 4.1e-51 204.9 139 71.9
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 4.1e-51 204.9 141 70.9
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 5.4e-51 204.5 129 74.4
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 7.1e-51 204.1 140 71.4
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 7.1e-51 204.1 127 74.0
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 9.2e-51 203.8 142 68.3
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 9.2e-51 203.8 131 68.7
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 1.2e-50 203.4 139 71.2
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 1.2e-50 203.4 142 68.3
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 1.2e-50 203.4 142 68.3
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 2.1e-50 202.6 139 69.1
Nn1g03899 Nelumbo nucifera HOM05D006195 ORTHO05D007710 3.5e-50 201.8 130 70.0
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 3.5e-50 201.8 141 69.5
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 4.6e-50 201.4 132 72.0
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 6.0e-50 201.1 141 70.2
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 7.8e-50 200.7 130 69.2
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 1.0e-49 200.3 141 70.2
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 1.0e-49 200.3 140 65.0
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 1.3e-49 199.9 141 68.1
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 1.3e-49 199.9 139 64.0
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 1.3e-49 199.9 140 65.0
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 1.3e-49 199.9 119 77.3
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 1.3e-49 199.9 140 65.0
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 1.7e-49 199.5 137 69.3
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 1.7e-49 199.5 137 69.3
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 1.7e-49 199.5 129 68.2
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 2.3e-49 199.1 142 66.2
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 2.3e-49 199.1 141 63.8
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 2.3e-49 199.1 141 67.4
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 3.0e-49 198.7 142 65.5
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 3.0e-49 198.7 140 67.1
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 3.0e-49 198.7 141 66.7
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 3.0e-49 198.7 140 66.4
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 3.9e-49 198.4 141 69.5
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 5.1e-49 198.0 140 67.9
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 6.6e-49 197.6 141 67.4
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 6.6e-49 197.6 144 63.9
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 8.7e-49 197.2 141 68.1
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 1.1e-48 196.8 143 62.9
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 1.1e-48 196.8 139 68.3
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 1.1e-48 196.8 138 65.9
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 1.1e-48 196.8 142 68.3
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.1e-48 196.8 127 73.2
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 1.5e-48 196.4 139 66.2
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 1.5e-48 196.4 143 63.6
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 1.5e-48 196.4 141 66.0
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 1.9e-48 196.1 145 64.8
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 1.9e-48 196.1 145 64.8
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 1.9e-48 196.1 145 64.8
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 1.9e-48 196.1 143 64.3
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 3.3e-48 195.3 143 63.6
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 3.3e-48 195.3 127 70.1
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 3.3e-48 195.3 141 64.5
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 4.3e-48 194.9 138 67.4
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 4.3e-48 194.9 140 67.9
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 4.3e-48 194.9 132 70.5
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 5.6e-48 194.5 143 62.9
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 7.3e-48 194.1 140 67.1
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 7.3e-48 194.1 138 63.8
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 9.6e-48 193.7 136 64.7
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 2.1e-47 192.6 146 63.0
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 2.1e-47 192.6 141 67.4
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 2.1e-47 192.6 129 69.0
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 3.6e-47 191.8 141 65.2
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 1.1e-46 190.3 126 68.3
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 1.4e-46 189.9 128 69.5
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 3.1e-46 188.7 123 71.5
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 4.0e-46 188.3 126 67.5
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 6.9e-46 187.6 142 66.2
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 6.9e-46 187.6 137 63.5
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 1.5e-45 186.4 139 64.0
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 5.8e-45 184.5 119 70.6
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 7.6e-45 184.1 128 62.5
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 1.7e-44 183.0 138 62.3
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 4.9e-44 181.4 127 65.4
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 6.4e-44 181.0 126 68.3
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 1.1e-43 180.3 143 65.0
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 9.3e-43 177.2 172 55.8
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 1.1e-40 170.2 130 61.5
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 1.5e-40 169.9 131 61.1
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 5.6e-40 167.9 105 75.2
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 9.6e-40 167.2 131 58.0
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 2.1e-39 166.0 145 59.3
Thecc.06G199100 Theobroma cacao HOM05D006195 ORTHO05D007710 3.1e-38 162.2 102 76.5
CSS0050458 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D007710 4.2e-35 151.8 100 69.0
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 7.1e-35 151.0 104 70.2
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 7.1e-35 151.0 141 55.3
SHI48938 Sapria himalayana HOM05D006195 ORTHO05D007710 4.3e-32 141.7 101 66.3
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 2.8e-31 139.0 141 51.8
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 1.8e-30 136.3 157 42.0
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 6.9e-30 134.4 157 43.9
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 2.0e-29 132.9 142 52.8
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 5.8e-29 131.3 110 57.3
SalBow4G2205 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.4e-27 125.9 76 75.0
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.4e-27 125.9 76 75.0
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.4e-27 125.9 76 75.0
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 2.3e-25 119.4 111 55.0
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 2.8e-23 112.5 99 50.5
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 5.3e-22 108.2 161 37.9
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 4.8e-15 85.1 55 70.9
SalBow1G7985 Salvia bowleyana HOM05D006195 ORTHO05D007710 6.5e-12 74.7 74 52.7
PRCOL_00004057 Prasinoderma coloniale HOM05D006195 ORTHO05D007710 1.0e-09 67.4 76 42.1


User provided reference genes

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