Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.0e-142 510.0 252 100.0
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.3e-65 253.1 258 55.4
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 8.8e-65 251.1 252 56.3
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.9e-60 236.1 252 53.6
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 2.1e-58 229.9 269 50.6
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 6.1e-58 228.4 260 52.3
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 7.4e-56 221.5 264 51.9
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 8.2e-55 218.0 265 51.7
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 8.2e-55 218.0 265 51.7
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 1.1e-54 217.6 263 51.3
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 4.5e-53 212.2 232 57.8
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 5.9e-53 211.8 250 52.0
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.1e-51 207.6 262 50.0
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 3.2e-51 206.1 272 48.2
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 3.2e-51 206.1 277 48.4
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 5.5e-51 205.3 273 49.8
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 3.6e-50 202.6 298 45.6
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 6.1e-50 201.8 268 48.5
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 8.0e-50 201.4 275 45.8
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.0e-49 201.1 250 49.2
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 3.0e-49 199.5 287 48.4
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 4.0e-49 199.1 259 47.1
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 6.8e-49 198.4 262 48.5
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 2.0e-48 196.8 274 47.8
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 2.6e-48 196.4 297 47.1
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.7e-48 194.5 260 48.1
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.3e-47 194.1 189 58.2
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 2.2e-47 193.4 264 47.3
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.2e-47 193.4 264 47.3
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 8.3e-47 191.4 270 49.3
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 1.8e-46 190.3 250 48.0
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 9.1e-46 188.0 243 46.5
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.6e-45 187.2 231 50.6
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 1.6e-45 187.2 272 46.3
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 7.7e-45 184.9 245 46.9
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.7e-44 183.7 249 46.6
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 6.5e-44 181.8 263 45.2
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.1e-43 181.0 262 46.2
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.5e-43 179.9 256 47.3
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 7.2e-43 178.3 223 47.1
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 9.4e-43 177.9 273 44.7
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 3.6e-42 176.0 252 49.2
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 4.7e-42 175.6 277 44.4
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 8.0e-42 174.9 273 46.2
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 1.4e-41 174.1 230 48.3
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 3.0e-41 172.9 228 52.6
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 3.0e-41 172.9 225 54.2
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 3.0e-41 172.9 252 47.2
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 4.0e-41 172.6 272 44.5
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 8.8e-41 171.4 233 50.6
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.5e-40 170.6 223 49.8
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 2.6e-40 169.9 284 43.0
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.6e-40 169.9 223 49.8
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 5.7e-40 168.7 248 44.4
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 5.7e-40 168.7 256 44.9
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 7.5e-40 168.3 284 43.0
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.3e-39 167.5 237 48.9
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 2.2e-39 166.8 242 45.5
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 6.3e-39 165.2 223 48.4
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 6.3e-39 165.2 289 40.8
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 8.3e-39 164.9 239 44.8
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 8.3e-39 164.9 260 43.1
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 1.4e-38 164.1 142 57.7
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 7.0e-38 161.8 228 44.7
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 7.0e-38 161.8 231 46.3
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.6e-37 160.6 185 50.8
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 1.0e-36 157.9 258 42.2
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 5.0e-36 155.6 224 46.9
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 6.6e-36 155.2 235 44.7
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 3.3e-35 152.9 225 45.3
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 5.5e-35 152.1 260 41.5
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.1e-34 150.2 303 38.3
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 2.8e-34 149.8 258 42.2
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 1.8e-33 147.1 240 45.4
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 2.3e-33 146.7 288 38.2
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 4.0e-33 146.0 231 42.4
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.2e-32 144.4 139 56.1
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.5e-32 144.1 229 45.9
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 2.0e-32 143.7 239 43.1
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 2.6e-32 143.3 240 42.1
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 2.6e-32 143.3 258 41.1
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 3.4e-32 142.9 224 40.6
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 7.5e-32 141.7 255 40.4
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 7.5e-32 141.7 210 44.3
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 9.8e-32 141.4 297 37.7
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 2.8e-31 139.8 231 40.7
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 6.3e-31 138.7 224 40.2
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 7.0e-30 135.2 233 43.3
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 9.2e-30 134.8 251 38.2
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 1.2e-29 134.4 231 43.3
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 4.5e-29 132.5 281 38.4
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 6.6e-28 128.6 342 31.3
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 3.3e-27 126.3 244 39.8
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 5.6e-27 125.6 234 40.6
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 5.6e-27 125.6 235 39.1
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.6e-26 124.0 223 44.8
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.6e-26 122.9 223 44.4
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 3.6e-26 122.9 225 40.0
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 4.7e-26 122.5 206 42.2
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 8.0e-26 121.7 196 42.9
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.4e-25 120.9 244 41.0
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.3e-25 120.2 281 37.4
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 5.2e-25 119.0 169 45.0
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 2.2e-23 113.6 125 48.0
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 2.9e-23 113.2 224 38.8
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 8.3e-23 111.7 190 39.5
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 3.2e-22 109.8 118 55.1
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 4.1e-22 109.4 234 40.2
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 4.1e-22 109.4 234 40.2
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 7.0e-22 108.6 245 35.1
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 9.2e-22 108.2 127 44.9
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 8.6e-20 101.7 314 34.7
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.6e-18 96.3 117 47.9
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.4e-17 94.4 175 42.3
HPP92_012357 Vanilla planifolia HOM05D006486 ORTHO05D007888 1.4e-14 84.3 229 35.8
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 5.4e-14 82.4 206 34.0
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 1.2e-13 81.3 77 53.2
AL6G48620 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 4.3e-11 72.8 155 36.1
unitig_37.g12336 Utricularia gibba HOM05D006486 ORTHO05D007888 9.5e-11 71.6 199 33.7
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 2.8e-10 70.1 75 54.7
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.6e-10 69.7 199 33.7
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 4.0e-09 66.2 138 38.4
Ah.14g088910 Amaranthus hybridus HOM05D000873 ORTHO05D001654 9.9e-08 61.6 56 60.7
Ah.09g236140 Amaranthus hybridus HOM05D006486 ORTHO05D007888 7.1e-06 55.5 155 32.3


User provided reference genes

Program Settings