Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 2.7e-72 275.4 157 100.0
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 2.0e-43 179.5 159 64.2
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 2.6e-43 179.1 160 66.9
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 4.5e-43 178.3 160 63.1
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 1.9e-41 172.9 159 62.9
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 6.1e-40 167.9 160 64.4
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 2.3e-39 166.0 163 65.0
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 3.0e-39 165.6 125 70.4
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 5.2e-39 164.9 163 61.3
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 5.2e-39 164.9 160 61.2
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 5.2e-39 164.9 161 66.5
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 5.2e-39 164.9 161 66.5
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 1.5e-38 163.3 145 63.4
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 2.6e-38 162.5 146 67.1
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 2.6e-38 162.5 159 61.6
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 7.4e-38 161.0 150 60.0
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 1.7e-37 159.8 158 58.9
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 2.2e-37 159.5 149 69.1
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 2.8e-37 159.1 159 59.7
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 4.8e-37 158.3 159 56.0
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 4.8e-37 158.3 158 62.7
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 1.4e-36 156.8 155 66.5
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 1.4e-36 156.8 159 57.9
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 1.4e-36 156.8 159 57.9
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 5.3e-36 154.8 124 68.5
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 9.1e-36 154.1 156 61.5
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 1.2e-35 153.7 159 56.6
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 2.0e-35 152.9 160 60.6
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 2.6e-35 152.5 151 64.2
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 4.5e-35 151.8 143 60.8
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 4.5e-35 151.8 142 57.7
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 7.7e-35 151.0 123 67.5
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 7.7e-35 151.0 131 62.6
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.0e-34 150.6 166 59.0
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.0e-34 150.6 160 62.5
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 1.0e-34 150.6 160 63.1
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 1.3e-34 150.2 153 56.9
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.3e-34 150.2 167 58.7
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 1.3e-34 150.2 162 61.7
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 2.9e-34 149.1 167 58.1
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 5.0e-34 148.3 161 59.6
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 8.5e-34 147.5 152 62.5
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.1e-33 147.1 134 62.7
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 1.1e-33 147.1 158 57.0
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 1.1e-33 147.1 133 60.9
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 1.1e-33 147.1 150 57.3
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 5.5e-33 144.8 164 53.7
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 5.5e-33 144.8 167 57.5
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 9.4e-33 144.1 198 47.0
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 2.1e-32 142.9 160 61.9
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 4.7e-32 141.7 127 63.0
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 6.1e-32 141.4 134 61.2
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 8.0e-32 141.0 185 47.6
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 1.0e-31 140.6 161 50.9
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 3.0e-31 139.0 151 54.3
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 1.5e-30 136.7 127 58.3
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 2.6e-30 136.0 134 55.2
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 2.6e-30 136.0 134 55.2
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 3.3e-30 135.6 134 55.2
CDE01G0172 Ceratophyllum demersum HOM05D005827 ORTHO05D005864 3.3e-30 135.6 154 50.0
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 3.3e-30 135.6 127 58.3
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 3.3e-30 135.6 134 67.2
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 5.7e-30 134.8 134 54.5
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 5.7e-30 134.8 165 51.5
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 5.7e-30 134.8 150 54.0
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 7.5e-30 134.4 134 54.5
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 9.7e-30 134.0 134 54.5
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 1.3e-29 133.7 134 54.5
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 1.7e-29 133.3 164 55.5
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 2.2e-29 132.9 127 59.8
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 2.8e-29 132.5 126 57.1
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 3.7e-29 132.1 165 51.5
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 3.7e-29 132.1 134 53.0
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 1.1e-28 130.6 148 49.3
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 1.8e-28 129.8 134 57.5
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 1.8e-28 129.8 158 53.8
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 4.1e-28 128.6 126 59.5
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 7.0e-28 127.9 100 67.0
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 9.1e-28 127.5 159 52.8
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 2.0e-27 126.3 142 52.8
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 7.7e-27 124.4 116 60.3
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 7.7e-27 124.4 150 50.7
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 1.3e-26 123.6 122 58.2
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 1.7e-26 123.2 145 51.7
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 5.0e-26 121.7 101 64.4
Thhalv10005665m.g Eutrema salsugineum HOM05D005827 ORTHO05D005864 6.5e-26 121.3 181 43.6
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 3.2e-25 119.0 115 58.3
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 5.5e-25 118.2 117 54.7
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 5.5e-25 118.2 154 48.1
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 2.7e-24 115.9 150 52.0
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 2.7e-24 115.9 169 43.8
Nn2g12688 Nelumbo nucifera HOM05D005827 ORTHO05D005864 6.1e-24 114.8 97 64.9
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 6.1e-24 114.8 138 47.1
Actinidia00415 Actinidia chinensis HOM05D005827 ORTHO05D005864 8.0e-24 114.4 99 65.7
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 2.3e-23 112.8 149 47.0
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 4.0e-23 112.1 132 48.5
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 4.4e-22 108.6 153 49.0
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 4.4e-22 108.6 160 46.2
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 7.5e-22 107.8 103 54.4
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 9.8e-22 107.5 106 52.8
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 1.4e-20 103.6 149 46.3
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 1.2e-19 100.5 106 50.9
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 3.5e-19 99.0 158 38.0
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 3.5e-19 99.0 158 38.0
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 1.3e-18 97.1 171 40.4
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 6.5e-18 94.7 102 63.7
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 2.5e-17 92.8 112 48.2
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 4.2e-17 92.0 87 55.2
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 4.2e-17 92.0 90 51.1
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 5.5e-17 91.7 92 51.1
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 1.6e-16 90.1 118 44.9
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 4.7e-16 88.6 86 53.5
ATR0691G195 Amborella trichopoda HOM05D005827 ORTHO05D005864 1.8e-15 86.7 78 56.4
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 1.8e-15 86.7 86 59.3
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 2.3e-15 86.3 115 44.3
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 2.0e-14 83.2 91 53.8
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 2.6e-14 82.8 100 48.0
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 3.4e-14 82.4 124 42.7
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 7.5e-14 81.3 86 52.3
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 3.7e-13 79.0 85 55.3
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 3.7e-13 79.0 102 49.0
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 6.3e-13 78.2 133 43.6
Zm00001eb324920 Zea mays HOM05D005827 ORTHO05D005864 1.4e-12 77.0 84 56.0
Zm00001eb091410 Zea mays HOM05D005827 ORTHO05D005864 9.2e-12 74.3 85 52.9
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 1.6e-11 73.6 57 59.6
SMO364G0308 Selaginella moellendorffii HOM05D005827 ORTHO05D000003 5.9e-11 71.6 131 38.9
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 2.9e-10 69.3 129 39.5
Pp3c21_2370 Physcomitrium patens HOM05D005827 ORTHO05D005864 1.1e-09 67.4 119 40.3
AagrBONN_evm.TU.Sc2ySwM_228.4380 Anthoceros agrestis HOM05D005827 ORTHO05D005864 2.8e-08 62.8 93 46.2
Ah.01g018070 Amaranthus hybridus HOM05D007150 ORTHO05D008994 3.6e-08 62.4 164 39.0
ClCG01G025500 Citrullus lanatus HOM05D005827 ORTHO05D005864 3.0e-07 59.3 110 38.2
CARHR144210 Cardamine hirsuta HOM05D005827 ORTHO05D005864 1.5e-06 57.0 52 57.7
HanXRQChr04g0106401 Helianthus annuus HOM05D003977 ORTHO05D004536 2.0e-06 56.6 61 55.7


User provided reference genes

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