Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003120001 Vitis vinifera HOM05D004978 ORTHO05D005621 3.2e-119 431.8 220 100.0
Dinv32884 Davidia involucrata HOM05D004978 ORTHO05D005621 3.5e-78 295.4 218 69.7
Manes.05G081900 Manihot esculenta HOM05D004978 ORTHO05D005621 7.2e-71 271.2 220 63.2
CiPaw.07G086800 Carya illinoinensis HOM05D004978 ORTHO05D005621 9.3e-71 270.8 215 64.2
Atru.chr5.1521 Acer truncatum HOM05D004978 ORTHO05D005621 1.6e-70 270.0 209 65.1
QL01p000805 Quercus lobata HOM05D004978 ORTHO05D005621 1.3e-69 266.9 213 62.0
Ciclev10019332m.g Citrus clementina HOM05D004978 ORTHO05D005621 1.8e-69 266.5 207 62.8
MD11G1278700 Malus domestica HOM05D004978 ORTHO05D005621 3.0e-69 265.8 216 63.0
Cfa006202 Carpinus fangiana HOM05D004978 ORTHO05D005621 1.9e-68 263.1 202 65.8
Potri.005G215200 Populus trichocarpa HOM05D004978 ORTHO05D005621 5.7e-68 261.5 213 63.4
Nn1g02459 Nelumbo nucifera HOM05D004978 ORTHO05D005621 7.4e-68 261.2 213 62.9
RcHm_v2.0_Chr6g0289911 Rosa chinensis HOM05D004978 ORTHO05D005621 1.2e-65 253.8 218 57.8
QL12p042266 Quercus lobata HOM05D004978 ORTHO05D005621 2.0e-65 253.1 197 62.9
Thecc.01G271500 Theobroma cacao HOM05D004978 ORTHO05D005621 1.3e-64 250.4 219 59.4
Actinidia24924 Actinidia chinensis HOM05D004978 ORTHO05D005621 2.2e-64 249.6 210 63.3
Haze_04642 Corylus avellana HOM05D004978 ORTHO05D005621 8.5e-64 247.7 195 65.6
FAN27G2645 Fragaria x ananassa HOM05D004978 ORTHO05D005621 8.5e-64 247.7 214 58.9
FAN20G1006 Fragaria x ananassa HOM05D004978 ORTHO05D005621 1.9e-63 246.5 215 57.7
FvH4_2g22940 Fragaria vesca HOM05D004978 ORTHO05D005621 3.2e-63 245.7 214 58.4
Gohir.D08G072400 Gossypium hirsutum HOM05D004978 ORTHO05D005621 4.2e-63 245.4 209 60.8
Gorai.004G076600 Gossypium raimondii HOM05D004978 ORTHO05D005621 4.2e-63 245.4 209 60.8
Gohir.A08G063900 Gossypium hirsutum HOM05D004978 ORTHO05D005621 2.1e-62 243.0 209 60.3
FAN15G0608 Fragaria x ananassa HOM05D004978 ORTHO05D005621 4.6e-62 241.9 214 57.5
FAN24G2655 Fragaria x ananassa HOM05D004978 ORTHO05D005621 1.1e-60 237.3 198 60.1
Sc05g0001300 Simmondsia chinensis HOM05D004978 ORTHO05D005621 1.1e-60 237.3 178 67.4
CANSAT25G0263 Cannabis sativa HOM05D004978 ORTHO05D005621 2.0e-60 236.5 213 57.3
Rhsim01G0272000 Rhododendron simsii HOM05D004978 ORTHO05D005621 2.0e-60 236.5 194 61.9
DCAR_002701 Daucus carota HOM05D004978 ORTHO05D005621 4.1e-58 228.8 199 59.3
Aqoxy5G00398 Aquilegia oxysepala HOM05D004978 ORTHO05D005621 9.1e-58 227.6 200 60.5
TWI75G1276 Tripterygium wilfordii HOM05D004978 ORTHO05D005621 9.1e-58 227.6 220 55.5
Lj2A1164T58 Lonicera japonica HOM05D004978 ORTHO05D005621 3.4e-57 225.7 186 62.4
Cc01_g19000 Coffea canephora HOM05D004978 ORTHO05D005621 4.5e-57 225.3 201 60.7
MD03G1258100 Malus domestica HOM05D004978 ORTHO05D005621 1.3e-56 223.8 174 66.1
HanXRQChr04g0113941 Helianthus annuus HOM05D004978 ORTHO05D005621 5.5e-55 218.4 167 65.9
VMungo0720G1640 Vigna mungo HOM05D004978 ORTHO05D005621 1.2e-54 217.2 211 55.5
Glyma.10G029800 Glycine max HOM05D004978 ORTHO05D005621 1.6e-54 216.9 212 56.1
PGR044G1133 Punica granatum HOM05D004978 ORTHO05D005621 4.7e-54 215.3 213 57.7
PSO832G2480 Papaver somniferum HOM05D004978 ORTHO05D005621 1.4e-53 213.8 217 53.0
PSO210G1189 Papaver somniferum HOM05D004978 ORTHO05D005621 6.7e-53 211.5 217 53.5
TWI12G0244 Tripterygium wilfordii HOM05D004978 ORTHO05D005621 3.3e-52 209.1 210 54.8
Cpa.g.sc52.118 Carica papaya HOM05D004978 ORTHO05D005621 2.2e-51 206.5 182 58.2
Phvul.007G175000 Phaseolus vulgaris HOM05D004978 ORTHO05D005621 2.8e-51 206.1 204 55.9
arahy.Tifrunner.gnm1.ann1.54WUVN Arachis hypogaea HOM05D004978 ORTHO05D005621 6.3e-51 204.9 212 51.9
Oeu014736.1 Olea europaea HOM05D004978 ORTHO05D005621 1.1e-50 204.1 190 58.9
vmacro14887 Vaccinium macrocarpon HOM05D004978 ORTHO05D005621 1.1e-50 204.1 195 57.9
Eucgr.K03324 Eucalyptus grandis HOM05D004978 ORTHO05D005621 1.4e-50 203.8 210 52.4
Psat6g058480 Pisum sativum HOM05D004978 ORTHO05D005621 1.4e-50 203.8 207 53.6
Lj5g0010127 Lotus japonicus HOM05D004978 ORTHO05D005621 2.4e-50 203.0 207 54.6
ClCG09G007410 Citrullus lanatus HOM05D004978 ORTHO05D005621 7.0e-50 201.4 221 49.8
Migut.D00356 Erythranthe guttata HOM05D004978 ORTHO05D005621 7.0e-50 201.4 206 52.4
Nitab4.5_0004115g0020 Nicotiana tabacum HOM05D004978 ORTHO05D005621 7.0e-50 201.4 218 49.1
COL.COLO4_09187 Corchorus olitorius HOM05D004978 ORTHO05D005621 2.6e-49 199.5 182 58.2
Sed0003895 Sechium edule HOM05D004978 ORTHO05D005621 7.7e-49 198.0 189 57.7
Peaxi162Scf00259g00051 Petunia axillaris HOM05D004978 ORTHO05D005621 1.3e-48 197.2 205 49.8
ECA236G1829 Erigeron canadensis HOM05D004978 ORTHO05D005621 1.5e-47 193.7 175 56.6
Nitab4.5_0000459g0120 Nicotiana tabacum HOM05D004978 ORTHO05D005621 1.5e-47 193.7 218 47.2
CsaV3_7G027890 Cucumis sativus L. HOM05D004978 ORTHO05D005621 7.2e-47 191.4 216 49.1
Lalb_Chr02g0142521 Lupinus albus HOM05D004978 ORTHO05D005621 7.2e-47 191.4 216 49.5
Lsat_1_v5_gn_8_93980 Lactuca sativa HOM05D004978 ORTHO05D005621 2.1e-46 189.9 155 61.3
PGSC0003DMG400019310 Solanum tuberosum HOM05D004978 ORTHO05D005621 3.6e-46 189.1 204 49.0
SGA_v2.0_scaffold1G00534 Striga asiatica HOM05D004978 ORTHO05D005621 6.1e-46 188.3 180 53.9
CAN.G433.6 Capsicum annuum HOM05D004978 ORTHO05D005621 2.3e-45 186.4 216 47.7
Medtr1g071300 Medicago truncatula HOM05D004978 ORTHO05D005621 3.0e-45 186.0 197 51.3
Solyc09g065690.4 Solanum lycopersicum HOM05D004978 ORTHO05D005621 5.2e-45 185.3 215 46.5
AUR62011971 Chenopodium quinoa HOM05D004978 ORTHO05D005621 6.7e-45 184.9 240 45.8
arahy.Tifrunner.gnm1.ann1.ZM38TH Arachis hypogaea HOM05D004978 ORTHO05D005621 8.8e-45 184.5 197 51.8
Sopen09g027430 Solanum pennellii HOM05D004978 ORTHO05D005621 8.8e-45 184.5 215 47.0
Aa31LG9G14570 Aethionema arabicum HOM05D004978 ORTHO05D005621 1.2e-44 184.1 208 46.6
CARHR193040 Cardamine hirsuta HOM05D004978 ORTHO05D005621 4.4e-44 182.2 212 47.2
BcaB01g04828 Brassica carinata HOM05D004978 ORTHO05D005621 1.7e-43 180.3 179 51.4
CDE02G4319 Ceratophyllum demersum HOM05D004978 ORTHO05D005621 3.7e-43 179.1 217 47.9
C03p11220 Brassica napus HOM05D004978 ORTHO05D005621 4.8e-43 178.7 179 50.8
BolC3t13593H Brassica oleracea HOM05D004978 ORTHO05D005621 4.8e-43 178.7 179 50.8
Zm00001eb370120 Zea mays HOM05D004978 ORTHO05D005621 1.4e-42 177.2 175 52.6
AL6G31360 Arabidopsis lyrata HOM05D004978 ORTHO05D005621 1.8e-42 176.8 179 52.0
BcaB01g04842 Brassica carinata HOM05D004978 ORTHO05D005621 1.8e-42 176.8 179 51.4
A03p09660 Brassica napus HOM05D004978 ORTHO05D005621 3.1e-42 176.0 200 47.0
AUR62032283 Chenopodium quinoa HOM05D004978 ORTHO05D005621 9.1e-42 174.5 242 44.2
Sed0016751 Sechium edule HOM05D004978 ORTHO05D005621 1.6e-41 173.7 206 48.1
Carub.0006s1819 Capsella rubella HOM05D004978 ORTHO05D005621 5.9e-41 171.8 200 48.0
AT5G19840 Arabidopsis thaliana HOM05D004978 ORTHO05D005621 2.9e-40 169.5 179 49.7
ATR0665G047 Amborella trichopoda HOM05D004978 ORTHO05D005621 6.5e-40 168.3 210 46.2
Ca_09727_v3 Cicer arietinum L. HOM05D004978 ORTHO05D005621 8.5e-40 167.9 198 49.5
BraA03t10282Z Brassica rapa HOM05D004978 ORTHO05D005621 5.5e-39 165.2 217 43.3
MELO3C015807.2 Cucumis melo HOM05D004978 ORTHO05D005621 1.2e-38 164.1 285 37.9
HPP92_022057 Vanilla planifolia HOM05D004978 ORTHO05D005621 4.7e-38 162.2 199 46.2
unitig_0.g1132 Utricularia gibba HOM05D004978 ORTHO05D005621 4.0e-37 159.1 242 42.6
Ah.11g050220 Amaranthus hybridus HOM05D004978 ORTHO05D005621 7.5e-36 154.8 208 44.7
TAR636G2873 Trochodendron aralioides HOM05D004978 ORTHO05D005621 2.2e-35 153.3 93 80.6
Prupe.8G234700 Prunus persica HOM05D004978 ORTHO05D005621 3.7e-35 152.5 88 84.1
Thhalv10013262m.g Eutrema salsugineum HOM05D004978 ORTHO05D005621 3.1e-34 149.4 195 43.1
Duzib133G0140 Durio zibethinus HOM05D004978 ORTHO05D005621 2.7e-33 146.4 96 75.0
Sp6g24570 Schrenkiella parvula HOM05D004978 ORTHO05D005621 2.2e-32 143.3 160 48.1
CSS0039116 Camellia sinensis var. sinensis HOM05D004978 ORTHO05D005621 6.8e-29 131.7 125 52.0
Hund09547 Selenicereus undatus HOM05D004978 ORTHO05D005621 1.3e-27 127.5 87 67.8
Glyma.02G144333 Glycine max HOM05D004978 ORTHO05D005621 4.9e-27 125.6 85 68.2
QL05p031917 Quercus lobata HOM05D000015 ORTHO05D005621 2.0e-25 120.2 126 47.6
TPR.G34891 Trifolium pratense HOM05D004978 ORTHO05D005621 2.0e-20 103.6 108 51.9
SMO343G0029 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 2.6e-20 103.2 101 51.5
SMO367G0146 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 2.6e-20 103.2 101 51.5
Potri.002G047875 Populus trichocarpa HOM05D004978 ORTHO05D005621 3.4e-20 102.8 123 45.5
Mapoly0003s0071 Marchantia polymorpha HOM05D004978 ORTHO05D005621 5.7e-20 102.1 108 47.2
SMO367G0062 Selaginella moellendorffii HOM05D006097 ORTHO05D005621 1.3e-19 100.9 101 50.5
MBI11_g08089_MAGBIO Magnolia biondii HOM05D004978 ORTHO05D005621 4.1e-18 95.9 115 46.1
SEGI_31795 Sequoiadendron giganteum HOM05D004978 ORTHO05D005621 1.2e-17 94.4 94 53.2
Pp3c26_13750 Physcomitrium patens HOM05D004978 ORTHO05D005621 2.0e-17 93.6 162 38.3
Lalb_Chr06g0162781 Lupinus albus HOM05D004978 ORTHO05D005621 3.9e-16 89.4 65 61.5
AagrBONN_evm.TU.Sc2ySwM_117.2029 Anthoceros agrestis HOM05D004978 ORTHO05D005621 7.3e-15 85.1 104 42.3
TPR.G21102 Trifolium pratense HOM05D004978 ORTHO05D005621 1.4e-10 70.9 119 40.3
TPR.G21665 Trifolium pratense HOM05D004978 ORTHO05D005621 1.4e-10 70.9 106 44.3
Dinv22502 Davidia involucrata HOM05D004978 ORTHO05D005621 3.9e-08 62.8 160 36.9
CSS0038001 Camellia sinensis var. sinensis HOM05D004978 ORTHO05D005621 5.6e-07 58.9 52 59.6
RcHm_v2.0_Chr3g0494951 Rosa chinensis HOM05D004383 ORTHO05D005050 8.1e-06 55.1 51 51.0


User provided reference genes

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