Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 5.7e-133 477.6 247 100.0
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 6.3e-84 314.7 253 70.4
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 1.4e-78 297.0 247 64.4
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 3.4e-77 292.4 251 67.3
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 2.7e-74 282.7 255 67.1
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 4.6e-74 282.0 247 62.3
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 3.3e-72 275.8 253 62.5
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 7.3e-72 274.6 249 62.7
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 1.2e-71 273.9 252 65.1
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 5.2e-70 268.5 258 60.1
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 8.9e-70 267.7 249 63.5
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.2e-69 267.3 200 73.0
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 4.4e-69 265.4 138 99.3
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 2.2e-68 263.1 253 61.3
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 2.9e-68 262.7 254 61.4
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 3.7e-68 262.3 138 97.8
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 1.1e-67 260.8 251 62.5
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 1.4e-67 260.4 249 63.5
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 1.4e-67 260.4 255 61.2
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 5.4e-67 258.5 254 62.2
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 5.4e-67 258.5 257 59.5
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 9.2e-67 257.7 256 59.8
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 9.2e-67 257.7 255 60.4
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 1.2e-66 257.3 249 63.5
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 2.7e-66 256.1 258 59.7
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 3.5e-66 255.8 256 59.8
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 4.6e-66 255.4 254 59.4
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 4.6e-66 255.4 255 59.6
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 4.6e-66 255.4 255 59.6
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 4.6e-66 255.4 255 61.6
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 6.0e-66 255.0 259 58.7
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 7.8e-66 254.6 253 60.5
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.3e-65 253.1 205 67.8
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 3.9e-65 252.3 250 60.8
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 6.6e-65 251.5 250 62.0
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 8.6e-65 251.1 276 56.5
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 1.9e-64 250.0 252 57.9
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 4.3e-64 248.8 254 57.9
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 5.6e-64 248.4 273 57.5
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 7.3e-64 248.1 256 58.2
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 1.2e-63 247.3 252 58.7
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 2.1e-63 246.5 249 56.6
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 6.2e-63 245.0 254 59.8
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 6.2e-63 245.0 257 56.0
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 1.4e-62 243.8 253 57.3
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 1.4e-62 243.8 293 54.9
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 1.8e-62 243.4 252 59.5
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 1.8e-62 243.4 259 57.9
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 2.3e-62 243.0 253 58.1
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 5.2e-62 241.9 277 56.3
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 1.5e-61 240.4 256 56.2
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 1.5e-61 240.4 252 57.1
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 1.5e-61 240.4 256 55.5
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 2.0e-61 240.0 258 57.8
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 5.8e-61 238.4 261 56.3
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 9.8e-61 237.7 250 57.2
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 1.3e-60 237.3 220 64.1
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 1.7e-60 236.9 253 58.9
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 3.7e-60 235.7 253 54.9
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 4.9e-60 235.3 254 55.1
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 8.3e-60 234.6 249 58.6
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 8.3e-60 234.6 247 58.3
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 1.1e-59 234.2 250 58.4
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 5.4e-59 231.9 251 58.6
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 7.1e-59 231.5 121 97.5
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 2.1e-58 229.9 250 57.6
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 2.1e-58 229.9 279 53.4
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 6.0e-58 228.4 253 55.3
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 6.0e-58 228.4 183 68.3
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 8.6e-57 224.6 249 55.4
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 8.6e-57 224.6 256 55.1
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 8.6e-57 224.6 253 55.7
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 1.1e-56 224.2 254 55.5
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 1.5e-56 223.8 254 53.1
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 3.3e-56 222.6 250 55.6
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 7.3e-56 221.5 254 54.3
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 9.5e-56 221.1 250 55.6
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 1.6e-55 220.3 193 64.2
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 3.6e-55 219.2 255 54.5
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 1.8e-54 216.9 254 53.9
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 2.3e-54 216.5 208 62.5
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 3.1e-54 216.1 253 53.8
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 6.8e-54 214.9 250 52.8
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 6.8e-54 214.9 250 54.8
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 2.0e-53 213.4 256 54.7
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 2.6e-53 213.0 250 54.0
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 3.4e-53 212.6 250 54.0
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 5.8e-53 211.8 251 53.8
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 9.9e-53 211.1 252 53.2
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 1.7e-52 210.3 265 52.1
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 4.9e-52 208.8 253 54.2
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 3.2e-51 206.1 235 52.3
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 2.7e-50 203.0 239 53.6
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 2.7e-50 203.0 238 53.8
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 3.5e-50 202.6 240 53.3
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 7.8e-50 201.4 257 52.1
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 1.3e-49 200.7 251 51.0
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 3.9e-49 199.1 136 73.5
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 1.9e-48 196.8 237 52.3
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 3.3e-48 196.1 269 48.0
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 9.6e-48 194.5 251 51.0
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 2.1e-47 193.4 237 51.5
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 3.6e-47 192.6 237 51.5
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 8.1e-47 191.4 237 52.3
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 1.1e-46 191.0 289 48.4
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 4.0e-46 189.1 265 47.9
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 5.8e-45 185.3 234 50.0
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 7.6e-45 184.9 195 54.4
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 1.7e-44 183.7 139 74.1
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 2.9e-44 183.0 250 48.8
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 4.9e-44 182.2 264 46.2
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 7.1e-43 178.3 141 68.8
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 9.9e-37 157.9 265 42.6
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 3.5e-34 149.4 253 40.7
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 1.6e-31 140.6 139 58.3
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 2.8e-31 139.8 260 44.2
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 4.8e-31 139.0 255 41.2
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 3.1e-30 136.3 192 47.4
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 2.9e-28 129.8 247 41.3
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 3.2e-27 126.3 180 45.6
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 5.5e-27 125.6 181 48.1
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 4.3e-24 115.9 181 44.8
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 1.4e-22 110.9 74 74.3
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 3.8e-20 102.8 158 48.7
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 9.3e-19 98.2 75 69.3
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 1.2e-18 97.8 223 35.9
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 8.7e-17 91.7 134 47.0
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 8.2e-15 85.1 127 44.9
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 2.2e-12 77.0 103 47.6
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 2.5e-11 73.6 237 31.6
arahy.Tifrunner.gnm1.ann1.H2YG1F Arachis hypogaea HOM05D005104 ORTHO05D006614 2.8e-07 60.1 84 45.2
BolC6t38485H Brassica oleracea HOM05D005104 ORTHO05D006614 3.7e-07 59.7 122 36.9
C07p45690 Brassica napus HOM05D005104 ORTHO05D021970 6.3e-07 58.9 127 37.0
C03p52730 Brassica napus HOM05D005104 ORTHO05D021970 3.1e-06 56.6 130 36.2
FAN15G2545 Fragaria x ananassa HOM05D005104 ORTHO05D006614 4.1e-06 56.2 116 40.5
Potri.001G206032 Populus trichocarpa HOM05D005104 ORTHO05D006614 4.1e-06 56.2 198 34.3
C09p03790 Brassica napus HOM05D005104 ORTHO05D006614 6.9e-06 55.5 116 37.9
C05p26840 Brassica napus HOM05D005104 ORTHO05D006614 9.0e-06 55.1 114 36.8


User provided reference genes

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