Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01002907001 Vitis vinifera HOM05D005203 ORTHO05D006383 2.7e-51 204.9 96 100.0
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 7.5e-49 196.8 95 96.8
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 1.0e-45 186.4 95 89.5
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 1.7e-45 185.7 95 89.5
VMungo1309G0298 Vigna mungo HOM05D005203 ORTHO05D006383 1.7e-45 185.7 95 90.5
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 2.3e-45 185.3 95 90.5
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 2.3e-45 185.3 95 90.5
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 2.9e-45 184.9 95 88.4
QL11p056319 Quercus lobata HOM05D005203 ORTHO05D006383 2.9e-45 184.9 95 89.5
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 6.6e-45 183.7 95 89.5
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 8.6e-45 183.3 95 89.5
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 8.6e-45 183.3 95 90.5
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 1.1e-44 183.0 95 89.5
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 1.5e-44 182.6 95 88.4
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 1.5e-44 182.6 95 89.5
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 2.5e-44 181.8 95 88.4
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 2.5e-44 181.8 95 87.4
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 4.2e-44 181.0 95 87.4
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 4.2e-44 181.0 95 89.5
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 5.5e-44 180.6 95 86.3
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 7.2e-44 180.3 95 87.4
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 7.2e-44 180.3 95 87.4
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 7.2e-44 180.3 95 87.4
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 7.2e-44 180.3 95 89.5
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 9.5e-44 179.9 95 88.4
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 1.2e-43 179.5 95 85.3
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 1.6e-43 179.1 95 89.5
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 1.6e-43 179.1 95 87.4
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 2.1e-43 178.7 94 87.2
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 2.1e-43 178.7 95 88.4
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 2.1e-43 178.7 95 86.3
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 2.1e-43 178.7 95 85.3
CSS0007702 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.8e-43 178.3 93 87.1
CSS0033501 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.8e-43 178.3 93 87.1
CSS0046634 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.8e-43 178.3 93 87.1
CDE07G0143 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 2.8e-43 178.3 95 85.3
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 2.8e-43 178.3 94 88.3
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 3.6e-43 177.9 95 88.4
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 3.6e-43 177.9 95 87.4
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 4.7e-43 177.6 95 86.3
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 4.7e-43 177.6 92 88.0
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 6.1e-43 177.2 95 86.3
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 6.1e-43 177.2 95 86.3
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 6.1e-43 177.2 95 85.3
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 8.0e-43 176.8 95 85.3
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 8.0e-43 176.8 95 86.3
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 8.0e-43 176.8 95 86.3
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 8.0e-43 176.8 95 86.3
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 1.0e-42 176.4 95 85.3
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 1.0e-42 176.4 95 85.3
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 1.0e-42 176.4 95 84.2
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 1.4e-42 176.0 95 85.3
Lj5A171G136 Lonicera japonica HOM05D005203 ORTHO05D006383 1.4e-42 176.0 95 84.2
Medtr3g118520 Medicago truncatula HOM05D005203 ORTHO05D006383 1.4e-42 176.0 95 86.3
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 1.4e-42 176.0 95 84.2
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 1.4e-42 176.0 90 87.8
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 1.8e-42 175.6 95 85.3
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.8e-42 175.6 91 86.8
Eucgr.L00583 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.8e-42 175.6 91 86.8
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 1.8e-42 175.6 94 86.2
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 2.3e-42 175.3 91 90.1
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 2.3e-42 175.3 95 86.3
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 2.3e-42 175.3 95 85.3
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.0e-42 174.9 95 84.2
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 3.0e-42 174.9 91 87.9
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 3.0e-42 174.9 95 84.2
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 4.0e-42 174.5 95 85.3
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 4.0e-42 174.5 95 85.3
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 4.0e-42 174.5 95 86.3
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 4.0e-42 174.5 95 86.3
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 4.0e-42 174.5 95 85.3
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 5.2e-42 174.1 95 85.3
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 5.2e-42 174.1 95 86.3
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 5.2e-42 174.1 95 84.2
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 5.2e-42 174.1 95 86.3
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 8.9e-42 173.3 95 84.2
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 1.2e-41 172.9 95 84.2
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 1.2e-41 172.9 95 84.2
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 1.2e-41 172.9 95 85.3
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.5e-41 172.6 95 83.2
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 1.5e-41 172.6 95 85.3
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 1.5e-41 172.6 95 85.3
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 1.5e-41 172.6 95 83.2
Sopen01g054300 Solanum pennellii HOM05D005203 ORTHO05D006383 1.5e-41 172.6 95 83.2
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 2.0e-41 172.2 95 84.2
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 2.0e-41 172.2 95 83.2
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 2.0e-41 172.2 94 83.0
PGSC0003DMG402014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 2.0e-41 172.2 95 83.2
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 2.6e-41 171.8 90 87.8
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 2.6e-41 171.8 95 83.2
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 4.4e-41 171.0 95 85.3
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 9.8e-41 169.9 95 84.2
CAN.G1725.2 Capsicum annuum HOM05D005203 ORTHO05D006383 9.8e-41 169.9 95 84.2
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 1.3e-40 169.5 95 83.2
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 1.7e-40 169.1 95 83.2
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 4.9e-40 167.5 95 82.1
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 8.3e-40 166.8 95 81.1
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 1.1e-39 166.4 128 66.4
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 5.4e-39 164.1 105 77.1
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 5.9e-38 160.6 95 74.7
ATR0807G194 Amborella trichopoda HOM05D005203 ORTHO05D006383 6.6e-37 157.1 95 75.8
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 1.8e-34 149.1 95 68.4
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 9.8e-33 143.3 95 68.4
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 3.7e-32 141.4 90 72.2
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 1.2e-30 136.3 91 70.3
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 1.6e-30 136.0 81 79.0
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 4.6e-30 134.4 75 81.3
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 2.3e-29 132.1 73 83.6
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 8.6e-29 130.2 75 80.0
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 2.5e-28 128.6 71 84.5
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 2.5e-28 128.6 71 84.5
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 9.5e-28 126.7 94 69.1
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 4.7e-27 124.4 95 65.3
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 4.7e-27 124.4 94 67.0
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 1.5e-25 119.4 95 56.8
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 1.4e-23 112.8 97 53.6
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 3.1e-18 95.1 57 77.2
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 2.0e-17 92.4 54 75.9
AL6G14740 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 9.2e-15 83.6 45 84.4
MCO01G683 Micromonas commoda HOM05D005203 ORTHO05D006383 9.2e-15 83.6 73 47.9
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 1.3e-08 63.2 64 54.7
AL7G13060 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 4.6e-06 54.7 28 89.3


User provided reference genes

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