Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01002902001 Vitis vinifera HOM05D003435 ORTHO05D004032 5.9e-62 240.7 126 100.0
Haze_15428 Corylus avellana HOM05D003435 ORTHO05D004032 1.2e-43 179.9 117 81.2
Sc03g0001420 Simmondsia chinensis HOM05D003435 ORTHO05D004032 3.6e-43 178.3 115 80.9
TAR376G0307 Trochodendron aralioides HOM05D003435 ORTHO05D004032 1.1e-42 176.8 117 81.2
MD15G1280900 Malus domestica HOM05D003435 ORTHO05D004032 1.8e-42 176.0 112 81.2
MD02G1168900 Malus domestica HOM05D003435 ORTHO05D004032 3.1e-42 175.3 112 82.1
PGR119G1381 Punica granatum HOM05D003435 ORTHO05D004032 3.1e-42 175.3 114 82.5
Cfa003996 Carpinus fangiana HOM05D003435 ORTHO05D004032 4.0e-42 174.9 117 79.5
Prupe.7G136400 Prunus persica HOM05D003435 ORTHO05D004032 5.2e-42 174.5 115 80.0
Manes.13G126200 Manihot esculenta HOM05D003435 ORTHO05D004032 1.5e-41 172.9 117 77.8
Nn5g30194 Nelumbo nucifera HOM05D003435 ORTHO05D004032 1.5e-41 172.9 117 80.3
Aa31LG4G18760 Aethionema arabicum HOM05D003435 ORTHO05D004032 2.0e-41 172.6 108 82.4
CiPaw.01G021600 Carya illinoinensis HOM05D003435 ORTHO05D004032 2.0e-41 172.6 110 82.7
QL06p042284 Quercus lobata HOM05D003435 ORTHO05D004032 2.0e-41 172.6 117 78.6
Carub.0005s1691 Capsella rubella HOM05D003435 ORTHO05D004032 2.6e-41 172.2 106 83.0
AL5G30740 Arabidopsis lyrata HOM05D003435 ORTHO05D004032 3.4e-41 171.8 106 84.0
AT3G50590 Arabidopsis thaliana HOM05D003435 ORTHO05D004032 3.4e-41 171.8 106 84.0
RcHm_v2.0_Chr2g0105001 Rosa chinensis HOM05D003435 ORTHO05D004032 4.4e-41 171.4 119 74.8
TAR381G0144 Trochodendron aralioides HOM05D003435 ORTHO05D004032 5.8e-41 171.0 117 80.3
FvH4_1g15690 Fragaria vesca HOM05D003435 ORTHO05D004032 7.5e-41 170.6 117 75.2
CARHR160100 Cardamine hirsuta HOM05D003435 ORTHO05D004032 9.8e-41 170.2 105 83.8
Atru.chr3.398 Acer truncatum HOM05D003435 ORTHO05D004032 1.3e-40 169.9 112 81.2
FAN19G0078 Fragaria x ananassa HOM05D003435 ORTHO05D004032 1.3e-40 169.9 117 75.2
Thhalv10010058m.g Eutrema salsugineum HOM05D003435 ORTHO05D004032 1.7e-40 169.5 113 79.6
Ciclev10024690m.g Citrus clementina HOM05D003435 ORTHO05D004032 4.9e-40 167.9 106 83.0
TWI53G0909 Tripterygium wilfordii HOM05D003435 ORTHO05D004032 4.9e-40 167.9 117 81.2
CSS0011380 Camellia sinensis var. sinensis HOM05D003435 ORTHO05D004032 6.4e-40 167.5 115 80.0
CSS0024619 Camellia sinensis var. sinensis HOM05D003435 ORTHO05D004032 6.4e-40 167.5 115 80.0
Migut.H00454 Erythranthe guttata HOM05D003435 ORTHO05D004032 8.3e-40 167.2 119 78.2
MSTRG.23766 Avicennia marina HOM05D003435 ORTHO05D004032 1.9e-39 166.0 119 75.6
FAN23G2700 Fragaria x ananassa HOM05D003435 ORTHO05D004032 1.9e-39 166.0 117 76.1
FAN26G2684 Fragaria x ananassa HOM05D003435 ORTHO05D004032 1.9e-39 166.0 117 75.2
Nn1g05856 Nelumbo nucifera HOM05D003435 ORTHO05D004032 1.9e-39 166.0 115 76.5
Hund13566 Selenicereus undatus HOM05D003435 ORTHO05D004032 1.9e-39 166.0 125 73.6
Eucgr.F01659 Eucalyptus grandis HOM05D003435 ORTHO05D004032 3.2e-39 165.2 106 83.0
Eucgr.F02662 Eucalyptus grandis HOM05D003435 ORTHO05D004032 3.2e-39 165.2 106 83.0
Lj4C140G3 Lonicera japonica HOM05D003435 ORTHO05D004032 5.4e-39 164.5 117 78.6
CANSAT01G2969 Cannabis sativa HOM05D003435 ORTHO05D004032 7.1e-39 164.1 114 78.1
THA.LOC104819223 Tarenaya hassleriana HOM05D003435 ORTHO05D004032 7.1e-39 164.1 124 72.6
Duzib147G1293 Durio zibethinus HOM05D003435 ORTHO05D004032 9.2e-39 163.7 117 76.9
Peaxi162Scf00916g00135 Petunia axillaris HOM05D003435 ORTHO05D004032 9.2e-39 163.7 112 77.7
Actinidia02768 Actinidia chinensis HOM05D003435 ORTHO05D004032 1.2e-38 163.3 116 76.7
SalBow5G2384 Salvia bowleyana HOM05D003435 ORTHO05D004032 2.7e-38 162.2 116 76.7
BcaB01g00607 Brassica carinata HOM05D003435 ORTHO05D004032 3.5e-38 161.8 100 85.0
SGA_v2.0_scaffold15G07262 Striga asiatica HOM05D003435 ORTHO05D004032 3.5e-38 161.8 122 73.8
vmacro17935 Vaccinium macrocarpon HOM05D003435 ORTHO05D004032 4.6e-38 161.4 115 75.7
Gorai.008G074500 Gossypium raimondii HOM05D003435 ORTHO05D004032 7.8e-38 160.6 117 76.1
Oeu049304.1 Olea europaea HOM05D003435 ORTHO05D004032 7.8e-38 160.6 120 77.5
arahy.Tifrunner.gnm1.ann1.IHL9QQ Arachis hypogaea HOM05D003435 ORTHO05D004032 1.0e-37 160.2 126 72.2
Nitab4.5_0000310g0180 Nicotiana tabacum HOM05D003435 ORTHO05D004032 1.0e-37 160.2 108 79.6
Sp5g11620 Schrenkiella parvula HOM05D003435 ORTHO05D004032 1.0e-37 160.2 113 77.0
BcaC07g39520 Brassica carinata HOM05D003435 ORTHO05D004032 1.3e-37 159.8 102 82.4
C08p25650 Brassica napus HOM05D003435 ORTHO05D004032 1.3e-37 159.8 102 82.4
BolC8t50184H Brassica oleracea HOM05D003435 ORTHO05D004032 1.3e-37 159.8 102 82.4
COL.COLO4_11380 Corchorus olitorius HOM05D003435 ORTHO05D004032 1.3e-37 159.8 116 77.6
Nitab4.5_0000961g0120 Nicotiana tabacum HOM05D003435 ORTHO05D004032 1.3e-37 159.8 108 79.6
Rhsim08G0102200 Rhododendron simsii HOM05D003435 ORTHO05D004032 1.3e-37 159.8 115 75.7
A09p43620 Brassica napus HOM05D003435 ORTHO05D004032 1.7e-37 159.5 102 82.4
BraA09t39823Z Brassica rapa HOM05D003435 ORTHO05D004032 1.7e-37 159.5 102 82.4
Cc07_g05840 Coffea canephora HOM05D003435 ORTHO05D004032 1.7e-37 159.5 116 77.6
Potri.005G136300 Populus trichocarpa HOM05D003435 ORTHO05D004032 1.7e-37 159.5 117 76.9
Glyma.05G090500 Glycine max HOM05D003435 ORTHO05D004032 2.3e-37 159.1 117 76.1
Gohir.A12G070200 Gossypium hirsutum HOM05D003435 ORTHO05D004032 2.3e-37 159.1 117 75.2
Potri.007G041000 Populus trichocarpa HOM05D003435 ORTHO05D004032 2.3e-37 159.1 117 76.9
Actinidia16507 Actinidia chinensis HOM05D003435 ORTHO05D004032 3.0e-37 158.7 117 76.1
Cpa.g.sc6.378 Carica papaya HOM05D003435 ORTHO05D004032 3.0e-37 158.7 105 81.9
CAN.G836.66 Capsicum annuum HOM05D003435 ORTHO05D004032 3.9e-37 158.3 112 77.7
Gohir.D12G088600 Gossypium hirsutum HOM05D003435 ORTHO05D004032 3.9e-37 158.3 117 75.2
Thecc.01G052400 Theobroma cacao HOM05D003435 ORTHO05D004032 5.1e-37 157.9 117 75.2
Sopen02g035220 Solanum pennellii HOM05D003435 ORTHO05D004032 6.6e-37 157.5 108 78.7
Aqoxy6G01408_Aqoxy6G01409 Aquilegia oxysepala HOM05D003435 ORTHO05D004032 8.6e-37 157.1 112 74.1
EL10Ac2g02707 Beta vulgaris HOM05D003435 ORTHO05D004032 8.6e-37 157.1 116 74.1
FAN28G0748 Fragaria x ananassa HOM05D003435 ORTHO05D004032 8.6e-37 157.1 102 81.4
AUR62031680 Chenopodium quinoa HOM05D003435 ORTHO05D004032 1.1e-36 156.8 116 75.0
AUR62032563 Chenopodium quinoa HOM05D003435 ORTHO05D004032 1.1e-36 156.8 116 75.0
Gohir.D11G197100 Gossypium hirsutum HOM05D003435 ORTHO05D004032 1.9e-36 156.0 117 73.5
ECA232G3039 Erigeron canadensis HOM05D003435 ORTHO05D004032 2.5e-36 155.6 115 73.0
Lalb_Chr16g0388361 Lupinus albus HOM05D003435 ORTHO05D004032 2.5e-36 155.6 139 66.2
DCAR_011292 Daucus carota HOM05D003435 ORTHO05D004032 4.3e-36 154.8 103 81.6
HanXRQChr14g0430631 Helianthus annuus HOM05D003435 ORTHO05D004032 4.3e-36 154.8 119 73.1
Lj2g0013536 Lotus japonicus HOM05D003435 ORTHO05D004032 4.3e-36 154.8 126 69.8
Lj4g0022564 Lotus japonicus HOM05D003435 ORTHO05D004032 4.3e-36 154.8 117 72.6
VMungo1215G2578 Vigna mungo HOM05D003435 ORTHO05D004032 4.3e-36 154.8 117 75.2
Ca_22188_v3 Cicer arietinum L. HOM05D003435 ORTHO05D004032 5.6e-36 154.5 119 73.1
Psat2g165400 Pisum sativum HOM05D003435 ORTHO05D004032 7.3e-36 154.1 126 69.8
Solyc02g090570.4 Solanum lycopersicum HOM05D003435 ORTHO05D004032 7.3e-36 154.1 108 77.8
Gorai.007G211000 Gossypium raimondii HOM05D003435 ORTHO05D004032 1.6e-35 152.9 117 72.6
PSO675G6314 Papaver somniferum HOM05D003435 ORTHO05D004032 2.1e-35 152.5 117 71.8
TPR.G19005 Trifolium pratense HOM05D003435 ORTHO05D004032 2.1e-35 152.5 119 72.3
Sabra07G0036700 Salix brachista HOM05D003435 ORTHO05D004032 4.7e-35 151.4 116 75.0
Medtr8g079820 Medicago truncatula HOM05D003435 ORTHO05D004032 8.1e-35 150.6 119 71.4
Glyma.17G176300 Glycine max HOM05D003435 ORTHO05D004032 1.1e-34 150.2 117 72.6
PSO541G5504 Papaver somniferum HOM05D003435 ORTHO05D004032 1.4e-34 149.8 108 73.1
Psat4g087800 Pisum sativum HOM05D003435 ORTHO05D004032 1.4e-34 149.8 119 70.6
Lalb_Chr09g0323051 Lupinus albus HOM05D003435 ORTHO05D004032 1.8e-34 149.4 117 71.8
ClCG02G012690 Citrullus lanatus HOM05D003435 ORTHO05D004032 4.0e-34 148.3 110 75.5
CsaV3_2G016800 Cucumis sativus L. HOM05D003435 ORTHO05D004032 4.0e-34 148.3 112 74.1
Medtr5g017800 Medicago truncatula HOM05D003435 ORTHO05D004032 8.9e-34 147.1 124 69.4
Sed0012547 Sechium edule HOM05D003435 ORTHO05D004032 8.9e-34 147.1 117 71.8
MELO3C020891.2 Cucumis melo HOM05D003435 ORTHO05D004032 2.6e-33 145.6 100 80.0
TPR.G31102 Trifolium pratense HOM05D003435 ORTHO05D004032 3.4e-33 145.2 127 67.7
Glyma.01G184500 Glycine max HOM05D003435 ORTHO05D004032 3.7e-32 141.7 126 65.9
Lsat_1_v5_gn_4_167420 Lactuca sativa HOM05D003435 ORTHO05D004032 6.4e-32 141.0 99 76.8
VMungo0251G2411 Vigna mungo HOM05D003435 ORTHO05D004032 1.1e-31 140.2 115 70.4
Aa31LG1G15390 Aethionema arabicum HOM05D003435 ORTHO05D004032 2.4e-31 139.0 115 67.8
ATR0021G056 Amborella trichopoda HOM05D003435 ORTHO05D004032 3.2e-31 138.7 111 70.3
Manes.12G101600 Manihot esculenta HOM05D003435 ORTHO05D004032 4.1e-31 138.3 108 68.5
Phvul.003G245800 Phaseolus vulgaris HOM05D003435 ORTHO05D004032 4.1e-31 138.3 117 69.2
CDE05G0341 Ceratophyllum demersum HOM05D003435 ORTHO05D004032 7.8e-30 134.0 115 67.8
unitig_27.g25323 Utricularia gibba HOM05D003435 ORTHO05D004032 1.3e-29 133.3 95 74.7
CDE05G1509 Ceratophyllum demersum HOM05D003435 ORTHO05D004032 1.7e-29 132.9 114 66.7
Ca_24784_v3 Cicer arietinum L. HOM05D003435 ORTHO05D004032 2.5e-28 129.0 169 50.9
Os09g0408000 Oryza sativa ssp. japonica HOM05D003435 ORTHO05D004032 9.6e-28 127.1 104 70.2
Zm00001eb051800 Zea mays HOM05D003435 ORTHO05D004032 2.1e-27 125.9 105 67.6
SHI23026 Sapria himalayana HOM05D003435 ORTHO05D004032 4.7e-27 124.8 117 65.8
SEGI_22339 Sequoiadendron giganteum HOM05D003435 ORTHO05D004032 1.4e-26 123.2 113 64.6
HPP92_006173 Vanilla planifolia HOM05D003435 ORTHO05D004032 6.8e-26 120.9 97 72.2
HPP92_006187 Vanilla planifolia HOM05D003435 ORTHO05D004032 6.8e-26 120.9 97 72.2
HPP92_008982 Vanilla planifolia HOM05D003435 ORTHO05D004032 1.7e-24 116.3 119 58.0
Ah.10g029830 Amaranthus hybridus HOM05D003435 ORTHO05D004032 1.1e-23 113.6 65 89.2
Mapoly0038s0024 Marchantia polymorpha HOM05D003435 ORTHO05D004032 7.8e-22 107.5 115 55.7
AagrBONN_evm.TU.Sc2ySwM_117.2914 Anthoceros agrestis HOM05D003435 ORTHO05D004032 3.0e-21 105.5 90 62.2
SMO304G0064 Selaginella moellendorffii HOM05D003435 ORTHO05D004032 3.0e-21 105.5 102 57.8
CBR_g11121 Chara braunii HOM05D003435 ORTHO05D004032 3.4e-17 92.0 91 56.0
Pp3c3_22080 Physcomitrium patens HOM05D003435 ORTHO05D004032 4.4e-17 91.7 83 59.0
CBR_g239 Chara braunii HOM05D003435 ORTHO05D004032 3.2e-15 85.5 102 49.0
Psat3g193680 Pisum sativum HOM05D003463 ORTHO05D030491 3.9e-13 78.6 61 70.5
COL.COLO4_11232 Corchorus olitorius HOM05D001978 ORTHO05D018189 6.2e-11 71.2 59 67.8
Glyma.11G057700 Glycine max HOM05D003435 ORTHO05D004032 1.5e-09 66.6 78 55.1
EL10Ac2g02709 Beta vulgaris HOM05D003435 ORTHO05D004032 2.0e-09 66.2 113 47.8
Psat4g191000 Pisum sativum HOM05D003435 ORTHO05D004032 4.6e-06 55.1 36 75.0


User provided reference genes

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