Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 1.4e-256 889.0 440 100.0
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 2.1e-215 752.3 441 83.4
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 4.4e-213 744.6 442 81.7
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 4.1e-211 738.0 442 80.5
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 2.7e-210 735.3 442 81.0
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 1.7e-209 732.6 474 77.4
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 3.9e-209 731.5 439 80.6
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 5.6e-208 727.6 442 79.9
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 7.3e-208 727.2 444 78.8
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 1.6e-207 726.1 442 79.9
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 8.9e-206 720.3 435 80.7
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 1.5e-205 719.5 441 78.9
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 2.6e-205 718.8 442 79.6
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 3.4e-205 718.4 441 80.0
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 4.4e-205 718.0 440 79.3
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 7.5e-205 717.2 440 78.4
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 9.9e-205 716.8 442 78.7
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 9.9e-205 716.8 436 79.8
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 6.4e-204 714.1 437 79.6
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 8.3e-204 713.8 442 78.5
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 1.1e-203 713.4 450 77.3
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 1.4e-203 713.0 441 78.5
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 1.4e-203 713.0 439 78.6
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 2.4e-203 712.2 436 79.8
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 3.2e-203 711.8 442 78.1
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 4.1e-203 711.4 443 77.7
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 1.2e-202 709.9 444 78.2
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 1.2e-202 709.9 445 78.2
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 2.1e-202 709.1 444 77.3
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 4.6e-202 708.0 438 79.9
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 1.3e-201 706.4 442 77.4
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 2.3e-201 705.7 439 78.4
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 3.9e-201 704.9 442 77.1
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 6.6e-201 704.1 439 78.1
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 1.5e-200 703.0 442 78.1
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 4.3e-200 701.4 441 78.0
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 1.2e-199 699.9 444 76.1
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 1.6e-199 699.5 441 76.4
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 2.1e-199 699.1 442 76.5
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 2.8e-199 698.7 442 77.4
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 2.8e-199 698.7 441 77.6
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.4e-198 696.4 439 77.0
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 2.6e-197 692.2 441 74.6
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 3.4e-197 691.8 464 74.4
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 5.8e-197 691.0 415 81.9
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 1.1e-195 686.8 443 74.3
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 7.1e-195 684.1 439 76.3
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 3.5e-194 681.8 439 76.5
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 6.0e-194 681.0 440 76.6
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 2.3e-193 679.1 433 76.7
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 1.1e-192 676.8 430 75.1
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 5.3e-190 667.9 441 72.3
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 1.2e-189 666.8 441 72.6
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 2.0e-189 666.0 446 73.8
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 2.6e-189 665.6 438 73.7
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 2.6e-189 665.6 441 74.4
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 4.4e-189 664.8 436 74.1
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 3.8e-188 661.8 442 72.4
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 4.9e-188 661.4 441 71.9
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 6.4e-188 661.0 434 74.4
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 1.1e-187 660.2 441 72.3
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 2.5e-184 649.0 462 67.7
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 3.3e-184 648.7 438 71.2
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 4.3e-184 648.3 462 71.9
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 4.8e-183 644.8 440 69.8
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 1.4e-182 643.3 401 77.3
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 1.8e-182 642.9 416 76.9
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 2.0e-181 639.4 442 69.9
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 9.9e-181 637.1 451 68.3
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 1.3e-180 636.7 444 70.5
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 2.5e-176 622.5 419 72.6
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 1.1e-174 617.1 440 71.1
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 1.2e-170 603.6 411 70.3
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 1.0e-169 600.5 437 67.7
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 1.5e-168 596.7 361 77.8
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 4.3e-168 595.1 439 69.0
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 5.6e-168 594.7 387 74.9
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 7.4e-168 594.3 387 74.7
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 3.1e-166 589.0 344 80.8
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 1.2e-165 587.0 444 66.0
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 8.4e-164 580.9 350 79.4
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 4.6e-162 575.1 654 49.7
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 1.6e-159 566.6 385 72.5
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 1.5e-157 560.1 347 76.9
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 7.2e-155 551.2 432 66.7
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 3.0e-145 519.2 387 68.5
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 7.4e-144 514.6 438 60.0
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 9.7e-144 514.2 437 58.1
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 3.7e-143 512.3 423 63.1
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 5.3e-142 508.4 498 56.0
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 1.7e-140 503.4 336 74.1
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 2.0e-136 490.0 434 59.4
QL11p056319 Quercus lobata HOM05D005203 ORTHO05D006383 6.3e-135 485.0 281 84.7
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 2.6e-133 479.6 444 57.2
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 3.5e-133 479.2 439 59.5
Lj5A171G136 Lonicera japonica HOM05D005203 ORTHO05D006383 6.5e-132 474.9 289 79.9
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 3.2e-131 472.6 436 57.6
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 5.5e-131 471.9 429 57.3
VMungo1309G0298 Vigna mungo HOM05D005203 ORTHO05D006383 1.6e-130 470.3 286 80.1
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 3.4e-128 462.6 390 64.4
Sopen01g054300 Solanum pennellii HOM05D005203 ORTHO05D006383 4.8e-127 458.8 287 78.4
Medtr3g118520 Medicago truncatula HOM05D005203 ORTHO05D006383 1.7e-124 450.3 286 75.9
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 1.0e-121 441.0 444 53.8
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 1.1e-118 431.0 363 57.6
ATR0807G194 Amborella trichopoda HOM05D005203 ORTHO05D006383 7.7e-117 424.9 290 71.7
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 1.5e-112 410.6 439 54.2
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 5.7e-112 408.7 438 53.7
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 1.7e-108 397.1 445 44.9
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 1.2e-106 391.0 404 53.7
CDE07G0143 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 2.0e-104 383.6 288 64.6
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 6.4e-103 378.6 416 52.6
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 2.7e-101 373.2 439 47.6
PGSC0003DMG402014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 2.1e-98 363.6 217 80.2
CAN.G1725.2 Capsicum annuum HOM05D005203 ORTHO05D006383 3.1e-97 359.8 217 79.3
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 4.0e-81 306.2 341 47.5
CSS0033501 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 8.1e-74 282.0 172 79.1
CSS0046634 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 8.1e-74 282.0 172 79.1
CSS0007702 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.6e-72 276.9 163 80.4
Eucgr.L00583 Eucalyptus grandis HOM05D005203 ORTHO05D006383 3.2e-70 270.0 152 82.9
ATR0807G110 Amborella trichopoda HOM05D005203 ORTHO05D006383 1.2e-64 251.5 150 76.7
Ah.01g009970 Amaranthus hybridus HOM05D005203 ORTHO05D006383 1.5e-64 251.1 185 66.5
QL11p056323 Quercus lobata HOM05D005203 ORTHO05D006383 2.5e-54 217.2 123 81.3
VMungo1309G1049 Vigna mungo HOM05D005203 ORTHO05D006383 1.0e-52 211.8 127 75.6
Eucgr.H04987 Eucalyptus grandis HOM05D005203 ORTHO05D006383 3.7e-50 203.4 126 72.2
Medtr3g118525 Medicago truncatula HOM05D005203 ORTHO05D006383 3.7e-50 203.4 128 74.2
GSVIVG01002907001 Vitis vinifera HOM05D005203 ORTHO05D006383 1.0e-47 195.3 95 96.8
Lj5A171G135 Lonicera japonica HOM05D005203 ORTHO05D006383 1.3e-47 194.9 127 74.8
CDE07G2075 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 1.1e-46 191.8 122 68.9
Nitab4.5_0010601g0030 Nicotiana tabacum HOM05D005203 ORTHO05D006383 4.8e-42 176.4 174 54.6
MCO01G683 Micromonas commoda HOM05D005203 ORTHO05D006383 2.5e-38 164.1 268 34.7
CANSAT78G0806 Cannabis sativa HOM05D005203 ORTHO05D006383 1.4e-36 158.3 105 74.3
Sc18g0005790 Simmondsia chinensis HOM05D005203 ORTHO05D006383 8.2e-34 149.1 98 69.4
AL7G13060 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 1.8e-33 147.9 112 67.0
PGSC0003DMG403014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 2.6e-32 144.1 80 80.0
Sed0000358 Sechium edule HOM05D005203 ORTHO05D006383 1.8e-28 131.3 107 60.7
GSVIVG01002825001 Vitis vinifera HOM05D005203 ORTHO05D006383 4.8e-26 123.2 69 98.6
SEGI_16108 Sequoiadendron giganteum HOM05D005203 ORTHO05D006383 6.3e-18 96.3 64 70.3
PGSC0003DMG401014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 1.1e-17 95.5 67 74.6
CAN.G1725.1 Capsicum annuum HOM05D005203 ORTHO05D006383 5.9e-16 89.7 68 69.1
AL6G14740 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 4.2e-14 83.6 45 84.4
CAN.G533.11 Capsicum annuum HOM05D005203 ORTHO05D006383 1.4e-12 78.6 48 68.8
Eucgr.L00581 Eucalyptus grandis HOM05D005203 ORTHO05D192196 5.5e-06 56.6 43 67.4


User provided reference genes

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