Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01002014001 Vitis vinifera HOM05D004979 ORTHO05D006190 5.7e-152 540.8 257 100.0
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 5.9e-149 530.8 257 98.1
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 5.7e-144 514.2 283 88.0
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 3.6e-138 495.0 255 88.2
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 7.4e-136 487.3 256 85.9
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 3.4e-133 478.4 252 87.7
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 9.4e-131 470.3 253 84.2
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 1.6e-130 469.5 252 85.3
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 2.1e-130 469.2 253 84.2
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 4.7e-130 468.0 252 83.7
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 4.7e-130 468.0 254 82.7
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 6.1e-130 467.6 252 86.1
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 7.9e-130 467.2 254 85.4
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 7.9e-130 467.2 254 83.1
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 3.0e-129 465.3 252 85.7
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 5.2e-129 464.5 251 83.7
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 6.7e-129 464.2 253 82.2
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 1.5e-128 463.0 252 83.7
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 4.4e-128 461.5 254 80.7
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.3e-127 459.9 254 81.1
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.3e-127 459.9 254 81.1
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 2.2e-127 459.1 251 82.1
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 2.2e-127 459.1 253 82.2
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 3.7e-127 458.4 251 82.1
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 4.8e-127 458.0 254 80.3
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 6.3e-127 457.6 252 81.7
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 1.1e-126 456.8 251 81.3
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 1.4e-126 456.4 252 80.6
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 1.8e-126 456.1 252 83.3
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 3.1e-126 455.3 254 81.1
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 4.1e-126 454.9 252 80.2
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 5.3e-126 454.5 255 81.6
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 9.1e-126 453.8 252 81.3
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 1.2e-125 453.4 251 81.3
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 3.5e-125 451.8 255 80.8
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 1.0e-124 450.3 255 80.4
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 1.3e-124 449.9 252 81.0
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 2.2e-124 449.1 254 79.1
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 2.2e-124 449.1 253 79.4
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 2.9e-124 448.7 252 79.4
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 8.5e-124 447.2 253 79.8
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 1.1e-123 446.8 254 78.3
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 2.5e-123 445.7 254 79.9
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 3.2e-123 445.3 252 79.0
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 3.2e-123 445.3 252 80.6
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 4.2e-123 444.9 252 79.8
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 7.2e-123 444.1 250 80.8
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 1.2e-122 443.4 252 79.4
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 1.2e-122 443.4 252 79.8
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 1.6e-122 443.0 252 79.4
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 2.7e-122 442.2 252 79.0
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 4.7e-122 441.4 252 79.8
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 2.3e-121 439.1 252 78.2
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 6.7e-121 437.6 253 78.7
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 6.7e-121 437.6 251 79.3
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 3.3e-120 435.3 254 74.4
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 3.3e-120 435.3 252 77.8
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 4.4e-120 434.9 252 78.2
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 4.4e-120 434.9 243 81.5
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 7.5e-120 434.1 252 77.8
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 1.3e-119 433.3 252 76.6
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 3.7e-119 431.8 250 77.6
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 3.7e-119 431.8 250 77.6
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 4.8e-119 431.4 283 71.7
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 6.3e-119 431.0 254 74.4
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 1.8e-118 429.5 254 74.4
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 5.3e-118 427.9 252 76.6
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 9.1e-118 427.2 251 76.5
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 1.2e-117 426.8 254 72.8
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 1.2e-117 426.8 228 86.4
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 1.2e-117 426.8 228 86.4
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 2.0e-117 426.0 251 77.3
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 2.0e-117 426.0 251 77.3
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 3.5e-117 425.2 251 76.9
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 4.5e-117 424.9 254 74.4
Sopen04g025050 Solanum pennellii HOM05D004979 ORTHO05D006190 2.2e-116 422.5 233 83.3
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 5.0e-116 421.4 254 73.2
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 8.5e-116 420.6 251 75.3
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 1.5e-115 419.9 255 72.9
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 1.5e-115 419.9 255 72.9
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 3.2e-115 418.7 254 72.4
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 3.2e-115 418.7 254 72.4
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 3.2e-115 418.7 254 72.4
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 4.2e-115 418.3 248 75.4
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 1.6e-114 416.4 254 72.0
Ca_17455_v3 Cicer arietinum L. HOM05D004979 ORTHO05D006190 3.0e-113 412.1 230 80.9
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 1.2e-112 410.2 253 70.8
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 3.4e-112 408.7 252 72.6
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.3e-111 406.8 251 74.9
Nitab4.5_0002303g0020 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.3e-111 406.8 250 76.4
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 1.7e-111 406.4 279 66.7
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 1.1e-110 403.7 284 69.4
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 1.4e-110 403.3 279 65.9
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 2.4e-110 402.5 270 71.1
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 1.2e-109 400.2 253 71.5
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 7.7e-109 397.5 252 74.2
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 2.7e-106 389.0 251 68.5
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 3.4e-104 382.1 199 87.4
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.7e-103 379.8 250 73.6
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 7.0e-102 374.4 252 65.1
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 7.7e-101 370.9 255 63.5
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 5.0e-100 368.2 251 67.7
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 1.5e-99 366.7 265 67.5
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 1.1e-94 350.5 259 66.0
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 1.4e-94 350.1 235 70.2
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 4.0e-89 332.0 228 70.2
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 2.9e-87 325.9 173 83.8
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 1.4e-86 323.6 254 57.1
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 9.2e-86 320.9 175 81.1
Cpa.g.sc46.4 Carica papaya HOM05D004979 ORTHO05D006190 1.7e-84 316.6 166 87.3
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 3.0e-84 315.8 277 52.7
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 5.0e-84 315.1 169 81.7
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 6.6e-84 314.7 253 55.7
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 4.0e-81 305.4 229 60.7
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 8.9e-81 304.3 172 76.7
CBR_g16989 Chara braunii HOM05D004979 ORTHO05D006190 1.6e-77 293.5 237 54.9
Dinv22420 Davidia involucrata HOM05D004979 ORTHO05D006190 5.2e-73 278.5 193 68.9
CAN.G1164.35 Capsicum annuum HOM05D004979 ORTHO05D006190 1.5e-72 276.9 169 77.5
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.9e-60 235.7 178 63.5
PRCOL_00000039 Prasinoderma coloniale HOM05D004979 ORTHO05D006190 6.7e-52 208.4 213 51.6
HanXRQChr14g0439781 Helianthus annuus HOM05D004979 ORTHO05D006190 8.1e-50 201.4 122 73.0
Cre14.g617150 Chlamydomonas reinhardtii HOM05D004979 ORTHO05D006190 1.8e-49 200.3 255 42.4
SHI20228 Sapria himalayana HOM05D004979 ORTHO05D006190 3.4e-48 196.1 164 58.5
MCO11G558 Micromonas commoda HOM05D004979 ORTHO05D006190 1.4e-46 190.7 205 42.9
Cfa022844 Carpinus fangiana HOM05D004979 ORTHO05D006190 5.1e-44 182.2 265 37.4
Actinidia01657 Actinidia chinensis HOM05D004979 ORTHO05D006190 4.3e-43 179.1 271 44.6
Lsat_1_v5_gn_8_74721 Lactuca sativa HOM05D004979 ORTHO05D006190 2.3e-36 156.8 85 76.5
QL03p011256 Quercus lobata HOM05D004979 ORTHO05D006190 4.1e-33 146.0 82 81.7
Actinidia27722 Actinidia chinensis HOM05D004979 ORTHO05D006190 1.3e-31 141.0 196 44.4
SHI32754 Sapria himalayana HOM05D001374 ORTHO05D004296 1.6e-29 134.0 120 55.8
Rhsim04G0165200 Rhododendron simsii HOM05D004979 ORTHO05D006190 6.1e-29 132.1 69 87.0
DCAR_032148 Daucus carota HOM05D004979 ORTHO05D006190 1.3e-18 97.8 70 62.9
Lsat_1_v5_gn_8_74741 Lactuca sativa HOM05D004979 ORTHO05D006190 1.0e-15 88.2 60 66.7
Aqoxy2G02599 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 5.5e-14 82.4 41 80.5
Sc05g0003730 Simmondsia chinensis HOM05D004979 ORTHO05D006190 7.4e-11 72.0 82 46.3
CBR_g72775 Chara braunii HOM05D004979 ORTHO05D132771 2.9e-07 60.1 141 30.5
Rhsim05G0125000 Rhododendron simsii HOM05D004979 ORTHO05D006190 1.9e-06 57.4 117 35.9


User provided reference genes

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