Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 1.2e-302 1042.3 519 100.0
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 3.7e-203 711.8 514 69.6
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 1.4e-202 709.9 520 70.8
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 2.4e-202 709.1 514 69.8
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 2.1e-190 669.5 517 66.3
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 3.6e-190 668.7 517 66.2
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 2.0e-188 662.9 520 65.8
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 7.6e-188 661.0 514 65.0
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 4.9e-187 658.3 517 65.8
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 4.9e-187 658.3 517 65.8
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 3.2e-186 655.6 525 65.5
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 5.1e-184 648.3 522 62.5
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 7.3e-183 644.4 520 63.3
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 1.6e-182 643.3 520 63.1
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 3.6e-182 642.1 522 65.3
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 4.8e-182 641.7 504 65.5
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 1.2e-180 637.1 514 62.3
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 3.4e-180 635.6 496 67.1
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 3.8e-179 632.1 517 64.0
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 3.8e-179 632.1 515 62.1
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 6.4e-179 631.3 516 61.2
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 7.9e-177 624.4 510 63.3
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 2.3e-176 622.9 521 62.4
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 4.3e-175 618.6 512 60.2
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 3.1e-173 612.5 516 58.5
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.5e-172 610.1 512 60.9
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 2.6e-172 609.4 456 68.0
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 5.8e-172 608.2 515 60.8
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 5.8e-172 608.2 524 61.3
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 4.9e-171 605.1 512 60.5
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 7.1e-170 601.3 513 57.9
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.2e-169 600.5 512 60.0
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.8e-168 596.7 511 60.3
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.5e-167 593.6 511 60.1
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.5e-167 593.6 541 57.5
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 3.7e-166 589.0 533 60.2
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 4.0e-165 585.5 514 58.6
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.2e-164 583.9 522 58.2
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 1.5e-164 583.6 496 61.5
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 2.6e-164 582.8 495 61.0
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 5.8e-164 581.6 523 56.6
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 5.8e-164 581.6 515 57.9
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 1.0e-163 580.9 521 57.6
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 1.7e-163 580.1 495 60.8
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 1.7e-163 580.1 525 59.0
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 4.2e-162 575.5 515 57.5
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 8.7e-160 567.8 513 55.6
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 1.1e-159 567.4 495 59.2
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 4.3e-159 565.5 513 57.9
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 6.3e-158 561.6 512 55.3
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 1.2e-156 557.4 515 56.9
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 2.0e-156 556.6 498 58.4
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 5.9e-156 555.1 515 56.9
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 2.2e-155 553.1 521 55.3
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 2.9e-155 552.7 515 56.7
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 2.5e-154 549.7 493 57.2
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 1.6e-153 547.0 494 57.9
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.0e-152 544.3 512 53.7
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 3.0e-152 542.7 493 57.4
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 1.5e-151 540.4 495 57.2
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 4.3e-151 538.9 518 53.5
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 9.7e-151 537.7 519 55.5
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 6.3e-150 535.0 495 54.3
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 1.8e-149 533.5 516 53.5
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 6.5e-147 525.0 516 53.7
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 8.5e-147 524.6 518 53.9
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 1.1e-146 524.2 494 56.1
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 1.9e-146 523.5 496 56.7
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 2.5e-146 523.1 518 52.5
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 2.5e-146 523.1 515 52.0
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 7.2e-146 521.5 517 52.6
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.2e-145 520.8 518 53.3
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.6e-145 520.4 504 54.4
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 2.1e-145 520.0 514 52.9
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 4.6e-145 518.8 519 52.4
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 1.0e-144 517.7 515 54.2
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 1.0e-144 517.7 512 53.5
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 3.0e-144 516.2 493 54.2
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 3.9e-144 515.8 496 56.7
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 8.8e-144 514.6 505 56.2
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 1.1e-143 514.2 519 52.6
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.1e-143 514.2 399 66.2
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 2.5e-143 513.1 534 53.0
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 4.3e-143 512.3 514 53.7
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 2.8e-142 509.6 518 52.7
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 3.7e-142 509.2 518 52.5
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 2.0e-140 503.4 511 51.3
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 2.5e-138 496.5 495 53.5
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 1.0e-136 491.1 512 49.2
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 3.9e-136 489.2 497 52.9
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 3.1e-133 479.6 511 51.5
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 2.6e-132 476.5 521 48.8
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 6.7e-128 461.8 473 54.1
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 6.3e-126 455.3 489 49.5
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 3.5e-124 449.5 403 57.6
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 1.3e-123 447.6 357 62.5
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 2.2e-123 446.8 513 47.2
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 4.7e-113 412.5 392 55.6
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 1.0e-107 394.8 526 43.2
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 1.0e-104 384.8 327 63.3
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 3.0e-104 383.3 270 69.6
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 3.3e-98 363.2 335 52.8
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 7.5e-95 352.1 347 54.2
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 7.8e-76 288.9 198 69.2
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 7.8e-76 288.9 198 69.2
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 6.0e-68 262.7 219 58.4
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 1.3e-67 261.5 522 31.6
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 3.6e-65 253.4 531 32.8
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 1.1e-61 241.9 508 34.1
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 9.3e-61 238.8 196 66.3
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 4.3e-58 229.9 160 66.9
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 1.9e-53 214.5 529 29.1
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-49 201.8 175 65.1
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 2.2e-38 164.5 500 27.8
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 1.3e-30 138.7 172 40.1
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 4.2e-29 133.7 116 57.8
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 5.5e-29 133.3 115 56.5
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 1.4e-27 128.6 142 47.9
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 2.6e-26 124.4 142 47.2
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 1.5e-23 115.2 115 48.7
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 2.5e-21 107.8 122 44.3
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 1.0e-19 102.4 119 48.7
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 2.6e-15 87.8 214 28.5
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 3.7e-09 67.4 37 78.4


User provided reference genes

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