Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001397001 Vitis vinifera HOM05D000009 ORTHO05D000008 9.8e-106 386.7 184 100.0
GSVIVG01004013001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.3e-25 120.6 82 70.7
GSVIVG01022832001 Vitis vinifera HOM05D000009 ORTHO05D000008 5.0e-25 118.6 97 61.9
GSVIVG01022829001 Vitis vinifera HOM05D000009 ORTHO05D000008 7.2e-24 114.8 76 72.4
GSVIVG01031998001 Vitis vinifera HOM05D000009 ORTHO05D000008 7.2e-24 114.8 82 67.1
GSVIVG01022835001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.2e-23 114.0 79 69.6
GSVIVG01022864001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.1e-19 100.9 85 60.0
GSVIVG01001381001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.8e-19 100.1 89 61.8
GSVIVG01022892001 Vitis vinifera HOM05D000009 ORTHO05D000008 7.7e-18 94.7 78 59.0
GSVIVG01023011001 Vitis vinifera HOM05D000009 ORTHO05D000008 4.2e-16 89.0 133 39.8
GSVIVG01023015001 Vitis vinifera HOM05D000009 ORTHO05D000008 7.2e-16 88.2 126 40.5
GSVIVG01013310001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.2e-15 87.4 82 51.2
GSVIVG01031992001 Vitis vinifera HOM05D000009 ORTHO05D000008 6.1e-15 85.1 89 53.9
GSVIVG01031991001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.4e-14 84.0 83 53.0
GSVIVG01023312001 Vitis vinifera HOM05D000009 ORTHO05D000008 2.3e-14 83.2 82 50.0
GSVIVG01001378001 Vitis vinifera HOM05D000009 ORTHO05D000008 2.4e-11 73.2 52 63.5
Ca_26424_v3 Cicer arietinum L. HOM05D000009 ORTHO05D021477 1.2e-10 70.9 135 34.8
GSVIVG01022962001 Vitis vinifera HOM05D000009 ORTHO05D000008 5.9e-10 68.6 65 53.8
Haze_06085 Corylus avellana HOM05D000009 ORTHO05D000008 3.8e-09 65.9 87 46.0
Cc02_g30020 Coffea canephora HOM05D000009 ORTHO05D000008 5.0e-09 65.5 89 46.1
Duzib106G1549 Durio zibethinus HOM05D000009 ORTHO05D000008 5.0e-09 65.5 134 37.3
Manes.10G074374 Manihot esculenta HOM05D000009 ORTHO05D000008 6.5e-09 65.1 89 41.6
QL04p013916 Quercus lobata HOM05D000009 ORTHO05D000008 3.2e-08 62.8 88 44.3
QL04p014669 Quercus lobata HOM05D000009 ORTHO05D000008 3.2e-08 62.8 85 45.9
Haze_06046 Corylus avellana HOM05D000009 ORTHO05D000008 7.2e-08 61.6 69 44.9
Medtr3g022790 Medicago truncatula HOM05D000009 ORTHO05D000008 1.2e-07 60.8 81 45.7
Cc02_g29890 Coffea canephora HOM05D000009 ORTHO05D000008 1.6e-07 60.5 89 40.4
FAN11G2944 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.6e-07 60.5 89 46.1
Thecc.10G172600 Theobroma cacao HOM05D000009 ORTHO05D000008 2.1e-07 60.1 88 42.0
Medtr7g021000 Medicago truncatula HOM05D000009 ORTHO05D000008 2.7e-07 59.7 100 40.0
Cc00_g24910 Coffea canephora HOM05D000009 ORTHO05D000008 3.6e-07 59.3 89 39.3
FAN12G0008 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.6e-07 59.3 87 47.1
CSS0030205 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 4.7e-07 58.9 95 43.2
CSS0042663 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 4.7e-07 58.9 95 43.2
Haze_03194 Corylus avellana HOM05D000009 ORTHO05D000008 4.7e-07 58.9 97 37.1
Medtr3g022730 Medicago truncatula HOM05D000009 ORTHO05D000008 4.7e-07 58.9 81 45.7
QL04p011320 Quercus lobata HOM05D000009 ORTHO05D000008 4.7e-07 58.9 87 44.8
FAN25G3180 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.1e-07 58.5 89 44.9
FAN25G3286 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.1e-07 58.5 89 44.9
Haze_01766 Corylus avellana HOM05D000009 ORTHO05D000008 1.4e-06 57.4 69 46.4
Haze_11107 Corylus avellana HOM05D000009 ORTHO05D000008 1.4e-06 57.4 71 39.4
Medtr0005s0210 Medicago truncatula HOM05D000009 ORTHO05D000008 1.8e-06 57.0 97 41.2
Medtr3g023030 Medicago truncatula HOM05D000009 ORTHO05D000008 1.8e-06 57.0 81 44.4
Medtr3g070650 Medicago truncatula HOM05D000009 ORTHO05D000008 1.8e-06 57.0 100 37.0
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 1.8e-06 57.0 95 43.2
Haze_10756 Corylus avellana HOM05D000009 ORTHO05D000008 2.3e-06 56.6 69 43.5
Medtr3g071010 Medicago truncatula HOM05D000009 ORTHO05D000008 2.3e-06 56.6 100 37.0
Medtr3g071040 Medicago truncatula HOM05D000009 ORTHO05D000008 2.3e-06 56.6 100 37.0
Medtr3g071080 Medicago truncatula HOM05D000009 ORTHO05D000008 2.3e-06 56.6 100 37.0
TPR.G3859 Trifolium pratense HOM05D000009 ORTHO05D000008 2.3e-06 56.6 75 46.7
Haze_03119 Corylus avellana HOM05D000009 ORTHO05D000008 3.0e-06 56.2 69 37.7
Medtr3g018930 Medicago truncatula HOM05D000009 ORTHO05D000008 3.0e-06 56.2 81 40.7
vmacro11084 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 3.0e-06 56.2 89 44.9
CiPaw.14G107400 Carya illinoinensis HOM05D000009 ORTHO05D000008 4.0e-06 55.8 87 40.2
GSVIVG01022828001 Vitis vinifera HOM05D002945 ORTHO05D003314 4.0e-06 55.8 85 38.8
Haze_10701 Corylus avellana HOM05D000009 ORTHO05D000008 5.2e-06 55.5 68 42.6
Lj5g0013774 Lotus japonicus HOM05D000009 ORTHO05D000008 5.2e-06 55.5 50 52.0
RhsimUnG0246300 Rhododendron simsii HOM05D000009 ORTHO05D000008 5.2e-06 55.5 88 43.2
arahy.Tifrunner.gnm1.ann1.EHT0BW Arachis hypogaea HOM05D000009 ORTHO05D000008 6.7e-06 55.1 127 29.1
CARHR089300 Cardamine hirsuta HOM05D000009 ORTHO05D000008 6.7e-06 55.1 103 36.9
Haze_03487 Corylus avellana HOM05D000009 ORTHO05D000008 6.7e-06 55.1 68 44.1
Psat5g213640 Pisum sativum HOM05D000009 ORTHO05D000008 6.7e-06 55.1 139 33.1
Haze_03193 Corylus avellana HOM05D000309 ORTHO05D000008 8.8e-06 54.7 68 42.6
Hma1.2p1_0116F.1_g056120 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 8.8e-06 54.7 92 41.3
TPR.G569 Trifolium pratense HOM05D000009 ORTHO05D000008 8.8e-06 54.7 81 43.2


User provided reference genes

Program Settings