Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 6.5e-70 267.3 139 100.0
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 4.3e-53 211.5 139 80.6
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 4.3e-53 211.5 137 81.0
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 4.3e-53 211.5 137 81.0
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 9.5e-53 210.3 137 78.1
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 2.8e-52 208.8 136 81.6
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 4.7e-52 208.0 137 80.3
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 6.1e-52 207.6 138 75.4
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 8.0e-52 207.2 131 81.7
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 1.0e-51 206.8 136 80.9
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.4e-51 206.5 134 81.3
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 1.8e-51 206.1 134 80.6
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 1.8e-51 206.1 138 78.3
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 2.3e-51 205.7 136 80.1
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 3.0e-51 205.3 139 74.8
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 4.0e-51 204.9 134 78.4
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 4.0e-51 204.9 134 79.1
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 4.0e-51 204.9 134 79.1
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 5.2e-51 204.5 139 74.1
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 6.8e-51 204.1 134 77.6
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 8.9e-51 203.8 134 79.1
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 4.4e-50 201.4 138 75.4
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 9.8e-50 200.3 137 79.6
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 2.2e-49 199.1 138 76.1
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 2.2e-49 199.1 136 78.7
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 2.2e-49 199.1 134 78.4
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 2.9e-49 198.7 136 75.0
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 3.7e-49 198.4 133 76.7
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 4.9e-49 198.0 134 77.6
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 1.1e-48 196.8 138 74.6
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 1.1e-48 196.8 137 75.2
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 1.4e-48 196.4 137 74.5
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 1.4e-48 196.4 138 74.6
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 1.4e-48 196.4 139 73.4
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 1.8e-48 196.1 134 76.9
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 1.8e-48 196.1 138 73.9
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 2.4e-48 195.7 134 75.4
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 3.2e-48 195.3 138 71.7
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 4.1e-48 194.9 138 76.8
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 5.4e-48 194.5 136 75.7
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 7.0e-48 194.1 139 71.9
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 1.6e-47 193.0 136 75.0
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 2.0e-47 192.6 138 76.1
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 2.0e-47 192.6 135 75.6
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 3.5e-47 191.8 137 75.9
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 4.6e-47 191.4 139 71.2
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 4.6e-47 191.4 138 76.8
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 5.9e-47 191.0 134 73.1
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 1.0e-46 190.3 139 71.9
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 1.3e-46 189.9 133 76.7
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 2.3e-46 189.1 139 71.9
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 3.9e-46 188.3 139 69.8
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 5.0e-46 188.0 138 70.3
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 6.6e-46 187.6 139 71.2
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 6.6e-46 187.6 135 74.8
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 2.5e-45 185.7 138 70.3
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 4.3e-45 184.9 138 71.7
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 5.6e-45 184.5 138 71.7
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 7.3e-45 184.1 138 65.2
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 7.3e-45 184.1 137 67.9
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 9.5e-45 183.7 136 71.3
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 1.2e-44 183.3 139 70.5
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 3.6e-44 181.8 136 69.9
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 3.6e-44 181.8 134 74.6
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 8.0e-44 180.6 136 71.3
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 2.3e-43 179.1 133 69.2
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 5.2e-43 177.9 133 67.7
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 6.8e-43 177.6 133 67.7
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 6.8e-43 177.6 131 71.0
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 1.5e-42 176.4 133 67.7
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 1.5e-42 176.4 135 70.4
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 1.5e-42 176.4 126 73.8
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 2.6e-42 175.6 131 74.0
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.6e-42 175.6 139 66.9
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 3.4e-42 175.3 131 71.0
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 3.4e-42 175.3 138 67.4
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 4.4e-42 174.9 139 66.9
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 4.4e-42 174.9 139 66.9
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 5.8e-42 174.5 137 67.2
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 7.5e-42 174.1 133 66.9
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 7.5e-42 174.1 133 66.9
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 9.8e-42 173.7 133 66.2
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 9.8e-42 173.7 136 67.6
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.3e-41 173.3 139 66.2
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 1.3e-41 173.3 138 67.4
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 1.7e-41 172.9 133 65.4
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 1.7e-41 172.9 133 66.2
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 2.2e-41 172.6 133 66.9
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 2.2e-41 172.6 133 66.9
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 2.2e-41 172.6 133 66.9
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 2.2e-41 172.6 133 66.9
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 2.2e-41 172.6 133 66.9
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 2.2e-41 172.6 132 67.4
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 3.7e-41 171.8 133 66.2
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 4.9e-41 171.4 139 65.5
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 4.9e-41 171.4 137 65.0
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 1.1e-40 170.2 138 65.9
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 1.1e-40 170.2 138 65.9
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 2.4e-40 169.1 130 70.0
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 5.4e-40 167.9 130 66.2
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 5.4e-40 167.9 133 64.7
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 1.6e-39 166.4 131 65.6
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 5.0e-38 161.4 131 64.9
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.5e-37 159.1 139 63.3
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-36 156.8 129 65.9
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 2.1e-36 156.0 114 72.8
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.2e-34 150.2 138 57.2
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 7.5e-34 147.5 141 58.9
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 9.8e-34 147.1 138 58.7
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.3e-33 146.7 138 60.1
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 1.3e-33 146.7 131 59.5
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 1.7e-33 146.4 140 57.9
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 1.7e-33 146.4 141 58.9
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 1.7e-33 146.4 140 57.9
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 1.7e-33 146.4 140 57.9
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 1.7e-33 146.4 141 58.9
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.7e-33 146.4 134 59.7
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 2.2e-33 146.0 141 58.2
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.2e-33 146.0 104 73.1
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 3.7e-33 145.2 141 58.2
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 1.1e-32 143.7 140 57.1
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 1.1e-32 143.7 140 57.1
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 2.1e-31 139.4 141 57.4
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 6.0e-31 137.9 140 55.0
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 5.1e-30 134.8 139 55.4
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 8.6e-30 134.0 133 54.9
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 1.1e-29 133.7 131 55.0
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 4.7e-28 128.3 102 66.7
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 2.0e-26 122.9 137 53.3
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 1.3e-25 120.2 135 52.6
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 1.1e-24 117.1 141 53.9
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 1.1e-24 117.1 141 53.9
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.2e-23 113.6 132 50.8
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 2.7e-23 112.5 114 57.0
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 1.8e-19 99.8 70 75.7
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 8.9e-19 97.4 137 48.9
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 1.9e-16 89.7 67 70.1
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 1.9e-08 63.2 133 36.1
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 5.4e-08 61.6 60 58.3
AagrBONN_evm.TU.Sc2ySwM_117.2481 Anthoceros agrestis HOM05D005256 ORTHO05D006491 3.0e-06 55.8 98 33.7


User provided reference genes

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