Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001302001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.1e-40 169.5 82 100.0
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 2.6e-10 68.6 56 64.3
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 3.4e-10 68.2 57 61.4
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 3.4e-10 68.2 57 61.4
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 3.4e-10 68.2 57 61.4
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 3.4e-10 68.2 57 61.4
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 3.4e-10 68.2 56 64.3
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.4e-10 68.2 52 71.2
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.4e-10 68.2 52 71.2
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.4e-10 68.2 52 71.2
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.4e-10 68.2 52 71.2
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.4e-10 68.2 52 71.2
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 4.5e-10 67.8 52 69.2
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 5.8e-10 67.4 67 55.2
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.0e-09 66.6 52 69.2
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 1.7e-09 65.9 52 67.3
Nn020s41490 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.7e-09 65.9 50 70.0
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 2.2e-09 65.5 54 63.0
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-09 65.5 52 67.3
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-09 65.5 52 67.3
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 2.9e-09 65.1 53 66.0
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 3.8e-09 64.7 52 67.3
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 3.8e-09 64.7 52 67.3
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 3.8e-09 64.7 88 47.7
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 3.8e-09 64.7 52 67.3
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 3.8e-09 64.7 52 61.5
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 5.0e-09 64.3 53 62.3
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.0e-09 64.3 52 65.4
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 6.5e-09 63.9 56 64.3
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 6.5e-09 63.9 67 53.7
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.5e-09 63.9 49 71.4
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 8.4e-09 63.5 67 53.7
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 67.3
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 67.3
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 67.3
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 67.3
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 67.3
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 67.3
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 67.3
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 8.4e-09 63.5 63 57.1
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 8.4e-09 63.5 53 64.2
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 8.4e-09 63.5 57 57.9
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 8.4e-09 63.5 53 64.2
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 8.4e-09 63.5 53 64.2
Nn8g40470 Nelumbo nucifera HOM05D004473 ORTHO05D005652 8.4e-09 63.5 50 68.0
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 8.4e-09 63.5 54 61.1
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 65.4
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 65.4
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 65.4
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 65.4
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 65.4
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 8.4e-09 63.5 52 65.4
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 1.1e-08 63.2 52 65.4
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 1.4e-08 62.8 52 65.4
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 1.9e-08 62.4 52 65.4
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 1.9e-08 62.4 54 63.0
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 2.5e-08 62.0 53 64.2
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 2.5e-08 62.0 51 64.7
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 3.2e-08 61.6 52 65.4
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 1.2e-07 59.7 56 55.4
MELO3C027413.2 Cucumis melo HOM05D004473 ORTHO05D005652 1.2e-07 59.7 58 56.9
Medtr2g089590 Medicago truncatula HOM05D004473 ORTHO05D005652 1.6e-07 59.3 51 62.7
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 2.1e-07 58.9 56 58.9
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 2.1e-07 58.9 56 58.9
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 2.7e-07 58.5 46 69.6
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 3.5e-07 58.2 47 68.1
HanXRQChr16g0503951 Helianthus annuus HOM05D004473 ORTHO05D005652 1.8e-06 55.8 51 60.8
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.9e-06 54.7 52 63.5
Nitab4.5_0007979g0030 Nicotiana tabacum HOM05D001387 ORTHO05D001250 6.7e-06 53.9 43 72.1
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 8.7e-06 53.5 54 53.7
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 8.7e-06 53.5 54 53.7


User provided reference genes

Program Settings