Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 9.1e-74 280.4 170 100.0
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 2.0e-49 199.5 170 61.8
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 2.0e-49 199.5 139 72.7
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 5.0e-48 194.9 170 63.5
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 6.6e-48 194.5 171 69.0
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 8.6e-48 194.1 128 78.9
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 2.5e-47 192.6 170 61.8
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 7.3e-47 191.0 128 78.1
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 7.3e-47 191.0 172 59.3
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 1.6e-46 189.9 175 58.3
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 1.6e-46 189.9 134 74.6
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 2.8e-46 189.1 180 63.9
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 2.8e-46 189.1 174 63.2
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 6.2e-46 188.0 168 73.8
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 1.0e-45 187.2 173 63.6
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 1.4e-45 186.8 138 69.6
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 2.3e-45 186.0 130 72.3
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 4.0e-45 185.3 128 72.7
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 5.2e-45 184.9 175 59.4
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 6.8e-45 184.5 131 72.5
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 8.9e-45 184.1 167 65.3
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 8.9e-45 184.1 170 69.4
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 1.2e-44 183.7 127 74.8
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 1.5e-44 183.3 167 67.7
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 1.5e-44 183.3 130 75.4
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 2.0e-44 183.0 169 68.0
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 3.4e-44 182.2 131 74.8
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 3.4e-44 182.2 167 62.3
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 3.4e-44 182.2 128 72.7
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 5.8e-44 181.4 174 57.5
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 7.5e-44 181.0 126 73.0
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 9.8e-44 180.6 132 68.9
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 9.8e-44 180.6 173 55.5
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 9.8e-44 180.6 181 64.6
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 2.9e-43 179.1 172 59.3
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 2.9e-43 179.1 130 72.3
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 3.7e-43 178.7 179 60.9
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 4.9e-43 178.3 171 57.3
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 1.9e-42 176.4 129 72.1
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 1.9e-42 176.4 131 67.9
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 3.2e-42 175.6 175 57.1
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 5.4e-42 174.9 171 59.1
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 1.2e-41 173.7 181 59.7
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 1.6e-41 173.3 119 74.8
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 2.7e-41 172.6 171 62.0
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 1.3e-40 170.2 170 56.5
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 1.7e-40 169.9 177 54.8
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 2.3e-40 169.5 127 69.3
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 3.3e-39 165.6 181 52.5
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 9.5e-39 164.1 131 65.6
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 2.1e-38 162.9 113 73.5
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 3.6e-38 162.2 171 54.4
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 2.3e-37 159.5 176 51.7
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 2.6e-36 156.0 131 67.2
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 9.8e-36 154.1 184 51.1
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 3.7e-35 152.1 127 63.0
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 8.3e-35 151.0 123 67.5
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 8.3e-35 151.0 124 62.1
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 1.4e-34 150.2 131 64.9
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 1.9e-34 149.8 138 60.1
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 1.2e-33 147.1 141 58.2
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 2.1e-33 146.4 125 60.8
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 2.1e-33 146.4 173 61.8
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 3.5e-33 145.6 124 59.7
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 3.5e-33 145.6 124 60.5
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 4.6e-33 145.2 124 60.5
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 4.6e-33 145.2 124 60.5
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 6.0e-33 144.8 124 60.5
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 6.0e-33 144.8 124 60.5
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 6.0e-33 144.8 124 60.5
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 1.0e-32 144.1 125 61.6
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 1.3e-32 143.7 125 60.8
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 1.7e-32 143.3 128 60.2
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 1.7e-32 143.3 126 62.7
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 1.7e-32 143.3 120 67.5
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 1.7e-32 143.3 134 56.0
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 1.1e-31 140.6 139 57.6
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 9.5e-31 137.5 138 60.9
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.4e-29 133.7 176 43.8
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 4.0e-29 132.1 131 58.0
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 5.2e-29 131.7 189 48.7
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 5.2e-29 131.7 179 45.3
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 8.9e-29 131.0 177 49.2
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 2.6e-28 129.4 179 41.9
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 1.1e-26 124.0 130 52.3
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 1.9e-26 123.2 179 43.0
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.5e-25 119.0 128 57.0
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 6.0e-25 118.2 130 50.8
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 6.6e-24 114.8 145 49.7
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 2.5e-23 112.8 149 48.3
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 9.6e-23 110.9 125 49.6
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 4.7e-22 108.6 185 43.2
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.8e-21 106.7 181 44.8
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 8.9e-21 104.4 143 46.2
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 4.9e-19 98.6 183 39.3
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 9.3e-18 94.4 130 49.2
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 4.6e-17 92.0 74 71.6
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 6.0e-17 91.7 101 59.4
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 3.0e-16 89.4 143 42.7
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 8.7e-16 87.8 171 38.6
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 1.6e-14 83.6 171 38.6
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 6.2e-14 81.6 132 43.9
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 1.4e-13 80.5 136 38.2
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 2.4e-13 79.7 130 40.8
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 3.1e-13 79.3 147 38.1
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 1.3e-11 73.9 78 48.7
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 1.8e-08 63.5 131 38.2
SGA_v2.0_scaffold90G27801 Striga asiatica HOM05D000069 ORTHO05D399115 6.7e-08 61.6 83 47.0
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 1.5e-07 60.5 81 50.6


User provided reference genes

Program Settings