Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 2.0e-92 342.4 170 100.0
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 3.6e-62 241.9 170 70.6
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 4.9e-59 231.5 170 68.8
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.8e-58 229.6 170 67.6
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 7.0e-58 227.6 162 67.9
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 1.3e-56 223.4 170 67.6
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 3.8e-56 221.9 161 68.9
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 1.9e-55 219.5 165 66.1
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 1.4e-53 213.4 171 63.7
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 6.8e-53 211.1 170 62.9
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 8.9e-53 210.7 170 64.7
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 1.2e-52 210.3 170 63.5
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 7.5e-52 207.6 171 63.7
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 1.3e-51 206.8 155 67.7
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 1.3e-51 206.8 173 63.6
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 2.9e-51 205.7 178 62.4
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 3.7e-51 205.3 170 65.9
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 8.3e-51 204.1 167 59.9
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 1.1e-50 203.8 164 66.5
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 1.4e-50 203.4 141 68.8
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 4.1e-50 201.8 159 66.0
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 9.2e-50 200.7 175 62.3
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 7.8e-49 197.6 169 63.3
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 3.9e-48 195.3 163 61.3
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.5e-47 193.4 171 58.5
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 2.5e-47 192.6 179 57.5
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 2.5e-47 192.6 150 63.3
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 3.3e-47 192.2 170 62.9
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 7.3e-47 191.0 175 58.9
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 9.5e-47 190.7 168 59.5
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 9.5e-47 190.7 158 60.8
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 1.2e-46 190.3 172 57.6
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 1.6e-46 189.9 106 84.0
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 2.8e-46 189.1 149 63.8
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 4.7e-46 188.3 175 58.9
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 1.0e-45 187.2 169 60.4
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 1.8e-45 186.4 121 74.4
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 1.8e-45 186.4 121 74.4
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 4.0e-45 185.3 154 62.3
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 1.2e-44 183.7 148 58.8
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 1.2e-44 183.7 175 57.7
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 1.2e-44 183.7 155 61.9
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 1.5e-44 183.3 169 59.8
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 2.0e-44 183.0 171 62.0
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 4.4e-44 181.8 169 59.2
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 4.4e-44 181.8 171 59.1
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 7.5e-44 181.0 156 62.8
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 9.8e-44 180.6 156 55.8
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 9.8e-44 180.6 156 56.4
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 1.7e-43 179.9 194 52.1
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 2.2e-43 179.5 158 57.0
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 2.9e-43 179.1 153 55.6
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 2.9e-43 179.1 162 61.7
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 6.4e-43 177.9 148 59.5
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 6.4e-43 177.9 111 71.2
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 6.4e-43 177.9 168 56.5
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 8.3e-43 177.6 165 54.5
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 1.9e-42 176.4 106 76.4
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 1.9e-42 176.4 158 57.6
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 2.4e-42 176.0 107 76.6
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 2.4e-42 176.0 164 56.1
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 5.4e-42 174.9 156 54.5
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 7.0e-42 174.5 156 54.5
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 9.2e-42 174.1 138 61.6
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 9.2e-42 174.1 159 57.2
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 3.5e-41 172.2 154 54.5
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 3.5e-41 172.2 156 53.8
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 4.6e-41 171.8 130 60.0
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 4.6e-41 171.8 109 70.6
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 1.3e-40 170.2 156 51.9
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 3.9e-40 168.7 173 52.6
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 6.6e-40 167.9 153 52.3
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 6.6e-40 167.9 153 52.3
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 6.6e-40 167.9 153 52.3
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 1.5e-39 166.8 153 52.3
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 1.5e-39 166.8 153 52.3
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 2.8e-38 162.5 184 53.8
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 4.7e-38 161.8 144 62.5
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 6.2e-38 161.4 100 76.0
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 1.4e-37 160.2 94 78.7
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 5.2e-37 158.3 180 46.7
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 6.8e-37 157.9 194 48.5
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 1.2e-36 157.1 89 82.0
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 2.0e-36 156.4 153 51.6
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 2.6e-36 156.0 174 52.3
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 9.8e-36 154.1 135 58.5
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 1.3e-32 143.7 95 70.5
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 2.3e-32 142.9 104 65.4
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 3.3e-31 139.0 127 55.1
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 3.3e-31 139.0 138 53.6
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 1.6e-30 136.7 94 70.2
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 2.1e-30 136.3 95 65.3
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 1.8e-29 133.3 136 51.5
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 3.1e-29 132.5 105 57.1
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 5.2e-29 131.7 133 53.4
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 2.6e-28 129.4 136 51.5
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 5.8e-28 128.3 120 46.7
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 2.1e-22 109.8 102 59.8
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 1.2e-20 104.0 75 62.7
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 1.5e-20 103.6 76 59.2
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 2.6e-20 102.8 73 64.4
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 9.9e-20 100.9 104 53.8
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 7.1e-18 94.7 170 38.8
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 8.7e-16 87.8 157 40.1
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 2.8e-14 82.8 60 63.3
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 3.1e-13 79.3 66 65.2
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 1.2e-12 77.4 83 51.8


User provided reference genes

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