Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 6.7e-284 979.9 475 100.0
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 2.8e-189 665.6 462 69.3
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 7.7e-187 657.5 436 73.9
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 2.9e-186 655.6 416 76.7
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 1.1e-185 653.7 414 76.1
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 1.4e-185 653.3 421 75.3
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 1.4e-185 653.3 417 75.3
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 3.2e-185 652.1 462 68.6
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 7.2e-185 651.0 400 77.8
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 5.7e-182 641.3 446 69.3
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 9.7e-182 640.6 418 72.0
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 2.6e-179 632.5 427 72.6
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 1.0e-178 630.6 406 75.6
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 1.3e-178 630.2 436 71.8
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 2.2e-178 629.4 421 72.2
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 2.2e-178 629.4 417 72.4
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 3.8e-178 628.6 436 70.4
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 5.0e-178 628.2 409 74.8
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 9.4e-177 624.0 417 71.9
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 2.7e-176 622.5 425 71.3
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 1.4e-175 620.2 417 71.7
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 5.2e-175 618.2 409 72.4
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 7.4e-174 614.4 404 70.8
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 4.1e-172 608.6 410 70.2
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 2.0e-171 606.3 427 70.5
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 4.5e-171 605.1 449 67.3
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 1.0e-170 604.0 424 71.5
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 1.3e-170 603.6 369 77.8
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 2.9e-170 602.4 426 71.8
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 5.0e-170 601.7 427 68.9
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 1.9e-169 599.7 437 65.7
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 1.9e-169 599.7 407 70.8
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 1.9e-169 599.7 416 70.4
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 3.2e-169 599.0 413 70.9
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 1.0e-167 594.0 406 69.7
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 1.4e-167 593.6 450 66.0
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 2.3e-167 592.8 422 68.0
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 2.0e-166 589.7 408 70.1
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 2.6e-166 589.3 424 69.1
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 2.2e-165 586.3 402 68.4
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 2.2e-165 586.3 408 69.1
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 3.7e-165 585.5 425 67.8
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 5.3e-164 581.6 408 67.6
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 1.0e-162 577.4 407 67.6
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 2.9e-162 575.9 408 66.9
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 8.5e-162 574.3 405 67.9
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 3.2e-161 572.4 425 65.6
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 4.7e-160 568.5 443 64.8
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 1.0e-159 567.4 417 65.7
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 1.8e-159 566.6 426 63.8
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.5e-158 563.5 402 65.9
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 3.4e-158 562.4 421 63.7
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 4.4e-158 562.0 420 64.3
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 5.7e-158 561.6 422 63.0
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 9.8e-158 560.8 406 66.3
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 8.3e-157 557.8 419 63.5
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 1.1e-156 557.4 412 63.1
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 1.1e-156 557.4 458 60.5
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 2.4e-156 556.2 419 63.2
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 3.1e-156 555.8 405 64.2
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 4.1e-156 555.4 449 61.7
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 7.0e-156 554.7 441 59.9
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 9.1e-156 554.3 412 64.6
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 9.1e-156 554.3 414 64.0
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 1.2e-155 553.9 436 61.9
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 3.5e-155 552.4 408 65.7
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 5.9e-155 551.6 404 64.4
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 5.9e-155 551.6 404 64.4
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 6.5e-154 548.1 427 63.5
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 8.5e-154 547.7 425 64.5
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 1.1e-153 547.4 415 62.9
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 1.6e-152 543.5 442 58.1
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 6.8e-151 538.1 407 63.1
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 2.6e-150 536.2 422 61.1
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 5.7e-150 535.0 413 62.2
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 3.7e-149 532.3 406 64.3
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 8.3e-149 531.2 382 66.2
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 7.8e-147 524.6 425 61.9
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 3.0e-143 512.7 405 60.2
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 1.0e-138 497.7 437 56.1
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 2.5e-137 493.0 295 78.0
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 4.3e-137 492.3 356 65.4
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 1.4e-135 487.3 412 57.8
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 4.0e-135 485.7 380 62.1
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 5.2e-135 485.3 401 58.4
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 5.2e-135 485.3 357 66.7
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 3.4e-134 482.6 403 59.3
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 2.2e-133 479.9 401 58.9
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 1.6e-128 463.8 428 54.4
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 3.1e-127 459.5 439 53.8
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 1.6e-123 447.2 286 73.4
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 2.5e-121 439.9 293 71.0
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 8.1e-120 434.9 399 53.4
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 4.6e-115 419.1 367 55.0
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 1.2e-107 394.4 300 62.7
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 2.9e-101 373.2 417 45.8
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 6.2e-96 355.5 417 47.0
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 4.4e-65 253.1 337 39.5
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 1.4e-63 248.1 281 47.0
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 7.7e-54 215.7 404 35.9
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 2.6e-49 200.7 123 75.6
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 1.0e-42 178.7 546 27.1
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 2.3e-42 177.6 198 44.9
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 2.0e-33 147.9 111 62.2
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 2.2e-32 144.4 518 25.9
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 2.0e-22 111.3 265 29.8
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 5.6e-20 103.2 101 52.5
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 1.6e-19 101.7 91 56.0
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 7.0e-15 86.3 58 67.2
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 4.7e-11 73.6 44 72.7
FAN07G0026 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.1e-07 60.5 41 63.4


User provided reference genes

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