Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 4.3e-70 268.1 157 100.0
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 1.2e-56 223.4 125 84.0
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 4.6e-56 221.5 138 84.1
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 1.8e-55 219.5 138 77.5
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 3.3e-54 215.3 121 83.5
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 4.3e-54 214.9 123 82.9
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 5.7e-54 214.5 123 81.3
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 6.3e-53 211.1 123 78.9
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 1.1e-52 210.3 121 81.8
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 1.4e-52 209.9 125 80.8
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.4e-52 209.9 125 80.0
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 1.8e-52 209.5 121 81.0
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 1.8e-52 209.5 125 80.8
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 2.4e-52 209.1 121 81.0
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 2.6e-51 205.7 121 78.5
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 3.4e-51 205.3 138 76.8
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 7.7e-51 204.1 123 80.5
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.7e-50 203.0 121 81.8
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 1.7e-50 203.0 135 72.6
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 2.2e-50 202.6 137 78.1
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 2.9e-50 202.2 119 78.2
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.2e-49 198.7 122 73.0
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 4.2e-49 198.4 120 80.0
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 4.2e-49 198.4 122 77.0
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 5.5e-49 198.0 138 69.6
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 5.5e-49 198.0 125 76.8
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 7.2e-49 197.6 125 76.8
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 9.4e-49 197.2 120 78.3
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 9.4e-49 197.2 122 72.1
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 9.4e-49 197.2 137 74.5
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.1e-48 196.1 121 77.7
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 4.6e-48 194.9 122 76.2
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 7.9e-48 194.1 140 76.4
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 1.4e-47 193.4 135 67.4
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 2.3e-47 192.6 139 74.8
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 2.3e-47 192.6 125 75.2
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 2.3e-47 192.6 112 81.2
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 3.0e-47 192.2 138 73.2
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 6.7e-47 191.0 119 74.8
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 8.8e-47 190.7 121 74.4
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.0e-46 189.5 121 73.6
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.6e-46 189.1 120 73.3
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.6e-46 189.1 138 68.1
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 5.7e-46 188.0 119 73.9
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 7.4e-46 187.6 121 73.6
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 7.4e-46 187.6 121 74.4
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 9.7e-46 187.2 119 76.5
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 1.7e-45 186.4 134 68.7
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 2.2e-45 186.0 115 78.3
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 2.2e-45 186.0 112 77.7
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 2.8e-45 185.7 121 72.7
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 3.7e-45 185.3 138 71.0
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 4.8e-45 184.9 121 73.6
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 8.2e-45 184.1 116 75.0
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.1e-44 183.7 139 69.1
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 1.4e-44 183.3 122 74.6
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 1.4e-44 183.3 111 74.8
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 2.4e-44 182.6 135 69.6
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 3.1e-44 182.2 138 71.0
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 5.3e-44 181.4 138 68.8
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 5.3e-44 181.4 112 77.7
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 9.1e-44 180.6 124 71.8
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 3.4e-43 178.7 125 75.2
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 1.7e-42 176.4 121 71.1
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 3.8e-42 175.3 136 66.9
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 8.5e-42 174.1 120 70.8
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 8.5e-42 174.1 124 69.4
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.4e-41 173.3 120 71.7
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 1.4e-41 173.3 138 66.7
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.4e-41 173.3 120 69.2
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.9e-41 172.9 173 53.2
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 1.9e-41 172.9 138 70.3
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 1.9e-41 172.9 138 69.6
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 2.5e-41 172.6 120 68.3
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 2.5e-41 172.6 120 70.0
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 9.4e-41 170.6 125 65.6
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 1.2e-40 170.2 125 66.4
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 2.7e-40 169.1 138 63.0
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 2.7e-40 169.1 126 66.7
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 2.7e-40 169.1 122 67.2
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 6.1e-40 167.9 94 83.0
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 7.9e-40 167.5 125 64.8
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 7.9e-40 167.5 125 64.8
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 7.9e-40 167.5 111 73.9
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 7.9e-40 167.5 98 80.6
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 7.9e-40 167.5 98 80.6
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 1.4e-39 166.8 125 64.8
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 1.4e-39 166.8 125 64.8
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 1.4e-39 166.8 125 64.8
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 1.4e-39 166.8 125 64.8
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 1.4e-39 166.8 106 71.7
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 2.3e-39 166.0 125 64.8
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 2.3e-39 166.0 125 64.8
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 5.2e-39 164.9 125 60.8
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 6.7e-39 164.5 125 64.8
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 8.8e-39 164.1 126 64.3
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.1e-38 163.7 125 65.6
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 1.5e-38 163.3 126 64.3
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 2.0e-38 162.9 125 64.0
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 2.6e-38 162.5 121 65.3
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 4.4e-38 161.8 116 65.5
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 5.7e-38 161.4 125 66.4
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 7.4e-38 161.0 126 62.7
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 3.7e-37 158.7 120 65.8
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 6.3e-37 157.9 165 52.7
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 6.3e-37 157.9 116 62.9
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 3.1e-36 155.6 93 75.3
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 1.2e-35 153.7 119 65.5
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 2.0e-35 152.9 125 59.2
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 5.9e-35 151.4 124 61.3
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 2.2e-34 149.4 126 61.1
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 2.2e-34 149.4 119 62.2
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 8.5e-34 147.5 117 65.0
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 4.7e-32 141.7 106 62.3
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 6.7e-31 137.9 78 83.3
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.7e-27 125.9 78 70.5
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 9.4e-25 117.5 91 64.8
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 2.1e-24 116.3 95 52.6
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 3.0e-23 112.5 95 52.6
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 4.0e-23 112.1 68 73.5
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 1.7e-21 106.7 94 50.0
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 6.3e-21 104.8 67 70.1
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 8.3e-21 104.4 95 49.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 1.4e-20 103.6 55 89.1
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 5.4e-20 101.7 67 70.1
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 1.6e-19 100.1 83 66.3
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 2.0e-19 99.8 117 45.3
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 7.2e-17 91.3 55 74.5
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 3.6e-16 89.0 55 76.4
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.5e-14 83.6 55 72.7
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 1.4e-12 77.0 79 46.8
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 4.1e-12 75.5 50 70.0
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.9e-10 69.3 48 62.5
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.1e-09 67.4 65 53.8
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 2.5e-09 66.2 57 59.6
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 1.6e-08 63.5 43 67.4
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 3.0e-07 59.3 92 31.5
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 3.4e-06 55.8 90 32.2


User provided reference genes

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