Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000776001 Vitis vinifera HOM05D000316 ORTHO05D029054 7.2e-33 143.3 70 100.0
GSVIVG01019479001 Vitis vinifera HOM05D000316 ORTHO05D001978 1.5e-09 65.9 43 72.1
vmacro11455 Vaccinium macrocarpon HOM05D000316 ORTHO05D001978 5.5e-09 63.9 43 69.8
Dinv37560 Davidia involucrata HOM05D000316 ORTHO05D001978 9.4e-09 63.2 71 47.9
Manes.14G019528 Manihot esculenta HOM05D000316 ORTHO05D001978 9.4e-09 63.2 68 51.5
QL02p031723 Quercus lobata HOM05D000316 ORTHO05D001978 9.4e-09 63.2 68 50.0
CAN.G532.53 Capsicum annuum HOM05D000316 ORTHO05D001978 1.2e-08 62.8 43 67.4
PGSC0003DMG400012309 Solanum tuberosum HOM05D000316 ORTHO05D001978 1.2e-08 62.8 43 67.4
MBI06_g04287_MAGBIO Magnolia biondii HOM05D000316 ORTHO05D001978 1.6e-08 62.4 43 67.4
Nitab4.5_0004161g0130 Nicotiana tabacum HOM05D000316 ORTHO05D001978 1.6e-08 62.4 43 67.4
Hma1.2p1_0952F.1_g240810 Hydrangea macrophylla HOM05D000316 ORTHO05D001978 2.1e-08 62.0 43 67.4
Solyc08g081920.4 Solanum lycopersicum HOM05D000316 ORTHO05D001978 2.1e-08 62.0 43 65.1
Sopen08g030210 Solanum pennellii HOM05D000316 ORTHO05D001978 2.1e-08 62.0 43 65.1
Actinidia01405 Actinidia chinensis HOM05D000316 ORTHO05D001978 2.7e-08 61.6 74 50.0
CSS0003345 Camellia sinensis var. sinensis HOM05D000316 ORTHO05D001978 2.7e-08 61.6 43 67.4
Glyma.06G124500 Glycine max HOM05D000316 ORTHO05D001978 2.7e-08 61.6 43 67.4
Psat5g080480 Pisum sativum HOM05D000316 ORTHO05D001978 3.6e-08 61.2 72 50.0
DCAR_006860 Daucus carota HOM05D000033 ORTHO05D001999 4.7e-08 60.8 66 45.5
Phvul.009G136600 Phaseolus vulgaris HOM05D000316 ORTHO05D001978 4.7e-08 60.8 43 65.1
SalBow8G1568 Salvia bowleyana HOM05D000316 ORTHO05D001978 4.7e-08 60.8 45 57.8
Cfa016351 Carpinus fangiana HOM05D000316 ORTHO05D001978 6.1e-08 60.5 43 67.4
CiPaw.11G125200 Carya illinoinensis HOM05D000316 ORTHO05D001978 6.1e-08 60.5 43 65.1
Haze_00100 Corylus avellana HOM05D000316 ORTHO05D001978 6.1e-08 60.5 43 67.4
arahy.Tifrunner.gnm1.ann1.GVJC4J Arachis hypogaea HOM05D000316 ORTHO05D001978 8.0e-08 60.1 43 67.4
TPR.G18772 Trifolium pratense HOM05D000316 ORTHO05D001978 8.0e-08 60.1 56 55.4
Atru.chr1.288 Acer truncatum HOM05D000316 ORTHO05D001978 1.0e-07 59.7 72 51.4
ClCG01G000690 Citrullus lanatus HOM05D000316 ORTHO05D001978 1.0e-07 59.7 43 65.1
MELO3C005861.2 Cucumis melo HOM05D000316 ORTHO05D001978 1.0e-07 59.7 43 65.1
Hma1.2p1_0216F.1_g091405 Hydrangea macrophylla HOM05D000316 ORTHO05D001978 1.0e-07 59.7 42 66.7
Sed0006797 Sechium edule HOM05D000316 ORTHO05D001978 1.0e-07 59.7 43 65.1
Migut.E01227 Erythranthe guttata HOM05D000316 ORTHO05D001978 1.4e-07 59.3 68 47.1
Glyma.04G239300 Glycine max HOM05D000316 ORTHO05D001978 1.4e-07 59.3 43 65.1
LjContig00312_ERROPOS870357g0024732 Lotus japonicus HOM05D000316 ORTHO05D001978 1.4e-07 59.3 72 41.7
Lalb_Chr11g0066511 Lupinus albus HOM05D000316 ORTHO05D001978 1.4e-07 59.3 43 65.1
Medtr3g090600 Medicago truncatula HOM05D000316 ORTHO05D001978 1.4e-07 59.3 43 65.1
Prupe.2G305900 Prunus persica HOM05D000316 ORTHO05D001978 1.4e-07 59.3 43 65.1
Hund11411 Selenicereus undatus HOM05D000316 ORTHO05D001978 1.4e-07 59.3 43 65.1
THA.LOC104825127 Tarenaya hassleriana HOM05D000316 ORTHO05D001978 1.4e-07 59.3 69 49.3
VMungo1309G2206 Vigna mungo HOM05D000316 ORTHO05D001978 1.4e-07 59.3 43 65.1
AUR62019794 Chenopodium quinoa HOM05D000316 ORTHO05D001978 1.8e-07 58.9 43 62.8
Gohir.A11G013700 Gossypium hirsutum HOM05D000316 ORTHO05D001978 1.8e-07 58.9 72 47.2
CSS0043798 Camellia sinensis var. sinensis HOM05D000316 ORTHO05D001978 2.3e-07 58.5 64 50.0
Carub.0008s1352 Capsella rubella HOM05D000316 ORTHO05D001978 2.3e-07 58.5 69 50.7
Potri.015G023700 Populus trichocarpa HOM05D000316 ORTHO05D001978 2.3e-07 58.5 43 65.1
TAR333G0004 Trochodendron aralioides HOM05D000316 ORTHO05D001978 2.3e-07 58.5 43 62.8
AL8G28050 Arabidopsis lyrata HOM05D000316 ORTHO05D001978 3.0e-07 58.2 69 50.7
CARHR266400 Cardamine hirsuta HOM05D000316 ORTHO05D001978 3.0e-07 58.2 69 50.7
CDE10G0740 Ceratophyllum demersum HOM05D000316 ORTHO05D001978 3.0e-07 58.2 43 58.1
AUR62010795 Chenopodium quinoa HOM05D000316 ORTHO05D001978 3.0e-07 58.2 43 60.5
Thhalv10014038m.g Eutrema salsugineum HOM05D000316 ORTHO05D001978 3.0e-07 58.2 69 50.7
Gohir.D11G013900 Gossypium hirsutum HOM05D000316 ORTHO05D001978 3.0e-07 58.2 72 45.8
Nitab4.5_0000472g0160 Nicotiana tabacum HOM05D000316 ORTHO05D001978 3.0e-07 58.2 72 47.2
Nitab4.5_0001331g0160 Nicotiana tabacum HOM05D000316 ORTHO05D001978 3.0e-07 58.2 72 47.2
QL09p011216 Quercus lobata HOM05D000316 ORTHO05D001978 3.0e-07 58.2 72 45.8
Sp6g15490 Schrenkiella parvula HOM05D000316 ORTHO05D001978 3.0e-07 58.2 69 50.7
Sed0013647 Sechium edule HOM05D000316 ORTHO05D001978 3.0e-07 58.2 72 47.2
Hund04820 Selenicereus undatus HOM05D000316 ORTHO05D001978 3.0e-07 58.2 43 62.8
TWI39G1269 Tripterygium wilfordii HOM05D000316 ORTHO05D001978 3.0e-07 58.2 43 62.8
EL10Ac5g12868 Beta vulgaris HOM05D000316 ORTHO05D001978 4.0e-07 57.8 43 60.5
CANSAT21G1943 Cannabis sativa HOM05D000316 ORTHO05D001978 4.0e-07 57.8 72 47.2
CiPaw.06G006400 Carya illinoinensis HOM05D000316 ORTHO05D001978 4.0e-07 57.8 72 45.8
MD06G1099700 Malus domestica HOM05D000316 ORTHO05D001978 4.0e-07 57.8 43 65.1
CSS0002690 Camellia sinensis var. sinensis HOM05D000316 ORTHO05D001978 5.2e-07 57.4 43 62.8
Cpa.g.sc3.36 Carica papaya HOM05D000316 ORTHO05D001978 5.2e-07 57.4 69 49.3
Lj1g0005188 Lotus japonicus HOM05D000316 ORTHO05D001978 5.2e-07 57.4 43 62.8
Lalb_Chr09g0320721 Lupinus albus HOM05D000316 ORTHO05D001978 5.2e-07 57.4 64 45.3
Nn1g01779 Nelumbo nucifera HOM05D000316 ORTHO05D001978 5.2e-07 57.4 43 60.5
Thecc.03G191300 Theobroma cacao HOM05D000316 ORTHO05D001978 5.2e-07 57.4 72 48.6
CsaV3_5G000790 Cucumis sativus L. HOM05D000316 ORTHO05D001978 6.7e-07 57.0 43 62.8
Dinv35298 Davidia involucrata HOM05D000316 ORTHO05D001978 6.7e-07 57.0 72 45.8
Gorai.007G014300 Gossypium raimondii HOM05D000316 ORTHO05D001978 6.7e-07 57.0 72 45.8
Hma1.2p1_1891F.1_g306680 Hydrangea macrophylla HOM05D000316 ORTHO05D001978 6.7e-07 57.0 66 45.5
Lj3C913T7 Lonicera japonica HOM05D000316 ORTHO05D001978 6.7e-07 57.0 43 62.8
Os08g0386700 Oryza sativa ssp. japonica HOM05D000316 ORTHO05D001978 6.7e-07 57.0 67 41.8
TAR374G1363 Trochodendron aralioides HOM05D000316 ORTHO05D001978 6.7e-07 57.0 43 65.1
ATR1131G014 Amborella trichopoda HOM05D000316 ORTHO05D001978 8.8e-07 56.6 43 58.1
A10p10850 Brassica napus HOM05D000316 ORTHO05D001978 8.8e-07 56.6 69 47.8
C09p43190 Brassica napus HOM05D000316 ORTHO05D001978 8.8e-07 56.6 69 47.8
BraA10t43169Z Brassica rapa HOM05D000316 ORTHO05D001978 8.8e-07 56.6 69 47.8
CAN.G108.15 Capsicum annuum HOM05D000316 ORTHO05D001978 8.8e-07 56.6 72 45.8
Duzib205G0019 Durio zibethinus HOM05D000316 ORTHO05D001978 8.8e-07 56.6 43 62.8
Aa31LG3G9200 Aethionema arabicum HOM05D000316 ORTHO05D001978 1.2e-06 56.2 69 47.8
FvH4_7g30880 Fragaria vesca HOM05D000316 ORTHO05D001978 1.2e-06 56.2 43 62.8
FAN01G1675 Fragaria x ananassa HOM05D000316 ORTHO05D001978 1.2e-06 56.2 43 62.8
FAN03G2406 Fragaria x ananassa HOM05D000316 ORTHO05D001978 1.2e-06 56.2 43 62.8
FAN06G2491 Fragaria x ananassa HOM05D000316 ORTHO05D001978 1.2e-06 56.2 43 62.8
FAN06G4271 Fragaria x ananassa HOM05D000316 ORTHO05D001978 1.2e-06 56.2 43 62.8
HanXRQChr03g0084991 Helianthus annuus HOM05D000316 ORTHO05D029054 1.2e-06 56.2 74 43.2
Medtr5g009700 Medicago truncatula HOM05D000316 ORTHO05D001978 1.2e-06 56.2 43 60.5
PGR142G1080 Punica granatum HOM05D000316 ORTHO05D001978 1.2e-06 56.2 43 62.8
RcHm_v2.0_Chr7g0195671 Rosa chinensis HOM05D000316 ORTHO05D001978 1.2e-06 56.2 43 60.5
Thecc.03G283500 Theobroma cacao HOM05D000316 ORTHO05D001978 1.5e-06 55.8 43 58.1
HPP92_022897 Vanilla planifolia HOM05D000316 ORTHO05D001978 1.5e-06 55.8 43 55.8
HPP92_026116 Vanilla planifolia HOM05D000316 ORTHO05D001978 1.5e-06 55.8 43 55.8
Aqoxy7G00218 Aquilegia oxysepala HOM05D000316 ORTHO05D001978 2.0e-06 55.5 43 58.1
AT5G53340 Arabidopsis thaliana HOM05D000316 ORTHO05D001978 2.0e-06 55.5 68 45.6
arahy.Tifrunner.gnm1.ann1.DAA76X Arachis hypogaea HOM05D000316 ORTHO05D001978 2.0e-06 55.5 39 69.2
MSTRG.1826 Avicennia marina HOM05D000316 ORTHO05D001978 2.0e-06 55.5 43 58.1
AUR62021056 Chenopodium quinoa HOM05D000316 ORTHO05D001978 2.0e-06 55.5 43 58.1
AUR62031476 Chenopodium quinoa HOM05D000316 ORTHO05D001978 2.0e-06 55.5 43 58.1
Peaxi162Scf00904g00474 Petunia axillaris HOM05D000316 ORTHO05D001978 2.0e-06 55.5 69 46.4
Peaxi162Scf50020g00002 Petunia axillaris HOM05D000316 ORTHO05D029054 2.0e-06 55.5 69 46.4
SEGI_31069 Sequoiadendron giganteum HOM05D000316 ORTHO05D017889 2.0e-06 55.5 43 55.8
Ca_24526_v3 Cicer arietinum L. HOM05D000669 ORTHO05D000679 2.6e-06 55.1 43 55.8
Cc08_g15640 Coffea canephora HOM05D000316 ORTHO05D001978 2.6e-06 55.1 43 60.5
MD07G1283500 Malus domestica HOM05D000316 ORTHO05D001978 2.6e-06 55.1 43 58.1
MD14G1119400 Malus domestica HOM05D000316 ORTHO05D001978 2.6e-06 55.1 43 55.8
Nitab4.5_0000223g0040 Nicotiana tabacum HOM05D000316 ORTHO05D001978 2.6e-06 55.1 38 65.8
PGR142G3103 Punica granatum HOM05D000316 ORTHO05D001978 2.6e-06 55.1 43 60.5
FAN10G3210 Fragaria x ananassa HOM05D000316 ORTHO05D001978 3.3e-06 54.7 43 60.5
PSO135G1021 Papaver somniferum HOM05D000316 ORTHO05D001978 3.3e-06 54.7 43 58.1
PSO384G3814 Papaver somniferum HOM05D000316 ORTHO05D001978 3.3e-06 54.7 43 58.1
Potri.003G136000 Populus trichocarpa HOM05D000316 ORTHO05D001978 3.3e-06 54.7 43 53.5
RcHm_v2.0_Chr1g0379951 Rosa chinensis HOM05D000316 ORTHO05D001978 3.3e-06 54.7 43 60.5
GSVIVG01028724001 Vitis vinifera HOM05D000316 ORTHO05D001978 3.3e-06 54.7 43 58.1
Duzib205G1112 Durio zibethinus HOM05D000316 ORTHO05D001978 4.4e-06 54.3 43 55.8
Actinidia34184 Actinidia chinensis HOM05D000316 ORTHO05D001978 5.7e-06 53.9 43 55.8
Ca_16666_v3 Cicer arietinum L. HOM05D000316 ORTHO05D001978 5.7e-06 53.9 44 59.1
MD01G1213800 Malus domestica HOM05D000316 ORTHO05D001978 5.7e-06 53.9 43 58.1
vmacro06585 Vaccinium macrocarpon HOM05D000316 ORTHO05D001978 5.7e-06 53.9 42 59.5
Actinidia08614 Actinidia chinensis HOM05D000316 ORTHO05D001978 7.5e-06 53.5 43 53.5
BcaC04g20464 Brassica carinata HOM05D000316 ORTHO05D001978 7.5e-06 53.5 69 46.4
BolC9t57192H Brassica oleracea HOM05D000316 ORTHO05D001978 7.5e-06 53.5 69 46.4
Cfa012866 Carpinus fangiana HOM05D000316 ORTHO05D001978 7.5e-06 53.5 43 60.5
Haze_08689 Corylus avellana HOM05D000316 ORTHO05D017889 7.5e-06 53.5 43 60.5
Eucgr.K00317 Eucalyptus grandis HOM05D000316 ORTHO05D001978 7.5e-06 53.5 43 62.8
HanXRQChr14g0462721 Helianthus annuus HOM05D000316 ORTHO05D001978 7.5e-06 53.5 43 60.5
BcaB08g35696 Brassica carinata HOM05D000316 ORTHO05D001978 9.7e-06 53.1 43 58.1
FAN10G2736 Fragaria x ananassa HOM05D000316 ORTHO05D001978 9.7e-06 53.1 43 58.1
TPR.G6697 Trifolium pratense HOM05D000316 ORTHO05D001978 9.7e-06 53.1 43 55.8


User provided reference genes

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