Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000676001 Vitis vinifera HOM05D017567 ORTHO05D006676 1.2e-45 186.0 90 100.0
GSVIVG01026690001 Vitis vinifera HOM05D017567 ORTHO05D006676 2.3e-28 128.6 73 89.0
GSVIVG01001583001 Vitis vinifera HOM05D017567 ORTHO05D006676 4.4e-27 124.4 80 77.5
GSVIVG01035242001 Vitis vinifera HOM05D000290 ORTHO05D006676 7.3e-22 107.1 62 83.9
GSVIVG01003894001 Vitis vinifera HOM05D017567 ORTHO05D006676 9.5e-22 106.7 81 69.1
GSVIVG01001888001 Vitis vinifera HOM05D017567 ORTHO05D006676 2.8e-21 105.1 81 67.9
GSVIVG01029100001 Vitis vinifera HOM05D017567 ORTHO05D006676 2.6e-19 98.6 57 86.0
GSVIVG01001767001 Vitis vinifera HOM05D017567 ORTHO05D006676 1.2e-16 89.7 47 89.4
CSS0016026 Camellia sinensis var. sinensis HOM05D004515 ORTHO05D006676 4.7e-13 77.8 62 61.3
vmacro20482 Vaccinium macrocarpon HOM05D000290 ORTHO05D006676 6.2e-13 77.4 62 61.3
MD17G1270600 Malus domestica HOM05D000290 ORTHO05D006676 8.1e-13 77.0 61 63.9
Rhsim10G0183800 Rhododendron simsii HOM05D000290 ORTHO05D006676 1.4e-12 76.3 62 59.7
Cfa007761 Carpinus fangiana HOM05D000290 ORTHO05D006676 2.4e-12 75.5 74 56.8
Haze_14311 Corylus avellana HOM05D000290 ORTHO05D006676 2.4e-12 75.5 62 62.9
Manes.01G122600 Manihot esculenta HOM05D000290 ORTHO05D006676 3.1e-12 75.1 62 59.7
Dinv28236 Davidia involucrata HOM05D000290 ORTHO05D006676 4.0e-12 74.7 61 62.3
Prupe.3G015600 Prunus persica HOM05D000290 ORTHO05D006676 4.0e-12 74.7 62 61.3
QL02p060375 Quercus lobata HOM05D000290 ORTHO05D006676 5.3e-12 74.3 62 59.7
TWI74G0971 Tripterygium wilfordii HOM05D000290 ORTHO05D006676 1.5e-11 72.8 62 59.7
TAR629G2667 Trochodendron aralioides HOM05D000290 ORTHO05D006676 1.5e-11 72.8 62 58.1
FAN26G0295 Fragaria x ananassa HOM05D000290 ORTHO05D006676 2.0e-11 72.4 66 54.5
RcHm_v2.0_Chr3g0490181 Rosa chinensis HOM05D000290 ORTHO05D006676 2.0e-11 72.4 62 59.7
Atru.chr12.1226 Acer truncatum HOM05D000290 ORTHO05D006676 7.6e-11 70.5 62 56.5
CiPaw.04G048800 Carya illinoinensis HOM05D000290 ORTHO05D006676 7.6e-11 70.5 74 52.7
FvH4_1g30310 Fragaria vesca HOM05D000290 ORTHO05D006676 9.9e-11 70.1 62 56.5
FAN19G0545 Fragaria x ananassa HOM05D000290 ORTHO05D006676 9.9e-11 70.1 62 56.5
FAN28G0448 Fragaria x ananassa HOM05D000290 ORTHO05D006676 2.2e-10 68.9 61 57.4
Ciclev10019576m.g Citrus clementina HOM05D000290 ORTHO05D006676 3.8e-10 68.2 86 47.7
Sabra04G0049700 Salix brachista HOM05D000290 ORTHO05D006676 3.8e-10 68.2 68 52.9
Aqoxy3G04138_Aqoxy3G04139 Aquilegia oxysepala HOM05D000290 ORTHO05D006676 8.4e-10 67.0 63 52.4
Aqoxy514s002 Aquilegia oxysepala HOM05D004515 ORTHO05D006676 8.4e-10 67.0 63 52.4
Actinidia17170 Actinidia chinensis HOM05D000290 ORTHO05D006676 1.4e-09 66.2 62 58.1
Potri.004G075100 Populus trichocarpa HOM05D000290 ORTHO05D006676 1.4e-09 66.2 61 57.4
CANSAT01G1953 Cannabis sativa HOM05D000290 ORTHO05D006676 3.2e-09 65.1 70 51.4
MELO3C023760.2 Cucumis melo HOM05D000290 ORTHO05D006676 9.3e-09 63.5 61 50.8
FAN23G1057 Fragaria x ananassa HOM05D004515 ORTHO05D006676 9.3e-09 63.5 56 55.4
Nn4g24663 Nelumbo nucifera HOM05D000290 ORTHO05D006676 9.3e-09 63.5 61 55.7
Nitab4.5_0002351g0020 Nicotiana tabacum HOM05D000290 ORTHO05D006676 9.3e-09 63.5 60 58.3
Nitab4.5_0005469g0010 Nicotiana tabacum HOM05D000290 ORTHO05D006676 9.3e-09 63.5 60 58.3
ClCG05G012110 Citrullus lanatus HOM05D000290 ORTHO05D006676 3.5e-08 61.6 62 50.0
CsaV3_3G020320 Cucumis sativus L. HOM05D000290 ORTHO05D006676 7.8e-08 60.5 61 49.2
PSO063G2011 Papaver somniferum HOM05D000290 ORTHO05D006676 2.3e-07 58.9 62 46.8
Sed0027292 Sechium edule HOM05D000290 ORTHO05D006676 3.0e-07 58.5 61 49.2
MSTRG.3678 Avicennia marina HOM05D000290 ORTHO05D006676 8.7e-07 57.0 62 50.0
Solyc04g008300.1 Solanum lycopersicum HOM05D000290 ORTHO05D006676 1.1e-06 56.6 60 53.3
Sopen04g003420 Solanum pennellii HOM05D000290 ORTHO05D006676 1.1e-06 56.6 60 53.3
DCAR_003415 Daucus carota HOM05D000238 ORTHO05D001156 1.5e-06 56.2 60 46.7
Oeu009443.1 Olea europaea HOM05D000290 ORTHO05D006676 2.5e-06 55.5 62 46.8
PGSC0003DMG400045947 Solanum tuberosum HOM05D000290 ORTHO05D006676 2.5e-06 55.5 60 51.7
PGSC0003DMG404029448 Solanum tuberosum HOM05D000290 ORTHO05D006676 2.5e-06 55.5 60 51.7
Cpa.g.sc178.14 Carica papaya HOM05D000290 ORTHO05D006676 3.3e-06 55.1 61 54.1
Thecc.04G000900 Theobroma cacao HOM05D000290 ORTHO05D006676 4.3e-06 54.7 60 48.3
SGA_v2.0_scaffold45G17125 Striga asiatica HOM05D000290 ORTHO05D006676 5.6e-06 54.3 62 50.0
Duzib138G1691 Durio zibethinus HOM05D000290 ORTHO05D006676 9.6e-06 53.5 44 61.4
Migut.K01085 Erythranthe guttata HOM05D000290 ORTHO05D006676 9.6e-06 53.5 62 46.8


User provided reference genes

Program Settings