Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 0.0e+00 1256.1 737 100.0
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 5.4e-288 994.2 793 71.0
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 2.8e-284 981.9 832 67.7
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 1.5e-282 976.1 790 67.7
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 4.5e-279 964.5 781 69.0
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 3.6e-276 954.9 811 69.4
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 4.0e-275 951.4 739 70.4
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 1.2e-271 939.9 798 64.4
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 1.6e-268 929.5 807 64.3
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 3.6e-268 928.3 793 66.5
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 4.7e-268 927.9 793 65.7
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 4.0e-267 924.9 809 65.6
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.5e-266 922.9 798 65.4
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 1.5e-266 922.9 792 66.7
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 2.0e-266 922.5 784 70.8
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 2.6e-266 922.2 783 69.3
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.3e-265 919.8 792 66.4
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 8.3e-265 917.1 799 67.7
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.9e-264 916.0 786 66.9
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 5.4e-264 914.4 754 69.0
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 2.7e-263 912.1 788 66.1
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 4.6e-263 911.4 807 65.9
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 6.0e-263 911.0 786 66.8
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 7.8e-263 910.6 740 69.1
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 1.3e-262 909.8 793 66.2
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 3.0e-262 908.7 796 65.7
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 6.6e-262 907.5 786 66.0
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 2.5e-261 905.6 771 67.7
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 2.8e-260 902.1 812 66.7
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 6.2e-260 901.0 819 61.9
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 8.1e-260 900.6 809 63.3
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.1e-259 900.2 805 65.1
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 1.8e-259 899.4 801 65.2
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 1.3e-257 893.3 812 63.3
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 9.2e-256 887.1 802 66.6
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.2e-255 886.7 756 71.3
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 5.1e-254 881.3 793 63.8
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 6.6e-254 880.9 785 64.1
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 4.3e-253 878.2 791 64.2
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 1.2e-252 876.7 765 65.5
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 2.1e-252 875.9 801 63.8
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 4.7e-252 874.8 805 64.2
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 8.1e-252 874.0 781 62.1
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 8.1e-252 874.0 782 61.5
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 6.8e-251 870.9 768 65.6
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 8.9e-251 870.5 761 65.3
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 1.2e-250 870.2 774 62.8
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 1.2e-250 870.2 741 65.3
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 3.4e-250 868.6 780 65.3
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.3e-249 866.7 766 65.3
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.3e-249 866.7 754 66.2
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 6.4e-249 864.4 746 65.8
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 8.4e-249 864.0 781 65.2
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 1.9e-248 862.8 795 61.9
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 3.2e-248 862.1 762 68.0
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 3.2e-248 862.1 758 65.8
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 3.2e-248 862.1 783 63.9
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 2.1e-247 859.4 801 59.9
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 4.6e-247 858.2 779 62.3
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 4.6e-247 858.2 797 60.4
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 1.7e-246 856.3 790 60.9
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 2.3e-246 855.9 760 66.4
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 3.0e-246 855.5 797 62.6
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 8.7e-246 854.0 774 63.2
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 2.5e-245 852.4 796 63.2
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 7.3e-245 850.9 781 62.6
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 1.8e-243 846.3 800 62.9
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 2.4e-243 845.9 803 59.2
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 2.4e-243 845.9 796 60.7
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 4.0e-243 845.1 782 63.7
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 2.6e-242 842.4 811 62.0
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 5.8e-242 841.3 798 63.9
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 1.2e-239 833.6 798 60.5
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 2.5e-237 825.9 799 61.3
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 5.6e-237 824.7 741 65.7
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 3.4e-234 815.5 772 62.6
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 2.4e-232 809.3 764 61.4
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 1.0e-230 803.9 790 60.3
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 1.5e-226 790.0 724 62.3
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.6e-226 789.3 853 56.0
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 4.5e-226 788.5 800 58.5
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 4.2e-224 781.9 690 65.4
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 8.7e-222 774.2 786 57.6
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.3e-221 771.9 797 56.7
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 2.9e-217 759.2 653 70.9
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 1.3e-209 733.8 662 64.5
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 4.2e-208 728.8 772 56.1
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 2.2e-204 716.5 791 57.9
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 8.5e-201 704.5 773 52.8
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 9.4e-200 701.0 791 56.3
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 2.7e-199 699.5 795 55.8
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 3.6e-199 699.1 744 57.5
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 7.9e-199 698.0 798 57.5
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 3.9e-198 695.7 798 57.4
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 1.5e-197 693.7 796 55.7
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 2.0e-197 693.3 782 54.7
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 7.2e-192 674.9 791 55.8
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 3.7e-188 662.5 797 54.2
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 5.0e-185 652.1 784 52.9
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 2.5e-184 649.8 790 52.2
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.2e-183 647.5 736 51.6
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 2.1e-183 646.7 736 51.4
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.0e-182 644.4 789 53.7
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 6.8e-182 641.7 736 51.1
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 1.2e-181 641.0 772 50.6
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 5.5e-176 622.1 893 45.4
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 9.4e-176 621.3 794 48.4
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 4.0e-174 615.9 769 51.1
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 2.0e-173 613.6 576 66.1
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 5.0e-169 599.0 784 46.9
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 5.2e-166 589.0 735 51.7
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 5.6e-160 568.9 645 56.4
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.7e-156 557.4 414 69.6
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 2.3e-153 547.0 467 71.5
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 6.6e-153 545.4 691 49.2
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 7.5e-149 531.9 613 53.7
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 3.3e-144 516.5 534 64.4
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 6.0e-138 495.7 714 47.3
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.3e-137 494.6 440 66.4
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 1.9e-131 474.2 518 57.3
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 2.5e-128 463.8 866 39.8
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 4.8e-127 459.5 838 40.8
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 3.4e-125 453.4 525 60.2
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 8.7e-121 438.7 422 63.3
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 4.2e-107 393.3 298 69.8
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 4.6e-106 389.8 323 64.1
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 2.0e-101 374.4 812 38.1
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 9.4e-91 339.0 885 34.4
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 2.1e-90 337.8 498 43.6
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 7.4e-88 329.3 736 37.8
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 3.7e-87 327.0 435 45.1
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.4e-86 324.3 494 46.4
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 7.7e-85 319.3 488 41.0
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.7e-84 318.2 252 63.9
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 3.8e-76 290.4 424 43.6
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 9.8e-64 249.2 355 53.8
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.4e-62 245.4 389 48.8
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.5e-59 235.3 176 72.7
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 5.5e-59 233.4 178 72.5
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.6e-56 224.6 371 42.3
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 4.2e-51 207.2 757 27.1
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.3e-39 169.1 328 37.2
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.7e-39 168.7 307 39.7
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 1.7e-39 168.7 137 67.2
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.7e-29 134.8 142 55.6
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.6e-28 130.2 253 37.9
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 4.3e-27 127.5 135 52.6
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 1.2e-26 125.9 113 56.6
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.0e-24 118.6 309 35.6
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.7e-23 114.4 249 35.7
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.4e-23 113.2 75 74.7
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 4.1e-22 110.9 102 61.8
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.7e-20 105.5 209 36.4
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 5.1e-20 104.0 104 55.8
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.6e-20 103.6 122 49.2
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.5e-19 101.7 75 68.0
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.6e-18 99.0 82 65.9
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.2e-18 97.1 80 61.2
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.6e-16 90.1 305 30.8
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.9e-15 88.2 69 60.9
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.9e-15 88.2 69 60.9
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.2e-14 84.3 80 55.0
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 7.1e-14 83.6 135 45.2
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 1.2e-13 82.8 71 66.2
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 2.1e-13 82.0 67 58.2
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.7e-13 81.6 164 42.1
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 7.8e-13 80.1 69 56.5
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 2.3e-12 78.6 66 57.6
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 3.3e-11 74.7 42 81.0
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 2.1e-10 72.0 90 53.3
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.1e-09 69.7 63 55.6
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 3.1e-09 68.2 45 66.7
HPP92_028492 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.3e-09 67.4 138 37.0
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 9.0e-09 66.6 51 70.6
HPP92_006873 Vanilla planifolia HOM05D000450 ORTHO05D002608 1.5e-08 65.9 161 37.9
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.5e-08 65.9 55 61.8
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 4.4e-08 64.3 43 65.1
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 1.3e-07 62.8 41 73.2
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 1.7e-07 62.4 55 56.4
HPP92_006544 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.4e-07 60.1 159 33.3
HPP92_028374 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.4e-06 58.5 103 38.8
HPP92_028506 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.4e-06 58.5 36 80.6
BcaB08g34419 Brassica carinata HOM05D003551 ORTHO05D004869 7.1e-06 57.0 51 62.7


User provided reference genes

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