Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 0.0e+00 1281.2 702 100.0
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.6e-188 663.7 670 60.1
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.8e-184 650.2 674 57.4
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 1.8e-184 650.2 657 57.4
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 9.9e-183 644.4 658 57.6
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 3.8e-182 642.5 666 58.1
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 3.3e-178 629.4 669 60.5
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 4.8e-177 625.5 685 57.7
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 7.9e-172 608.2 658 56.8
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.3e-171 607.4 658 55.2
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 2.8e-169 599.7 643 56.9
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 4.8e-169 599.0 661 57.0
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 8.2e-169 598.2 658 56.5
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 1.3e-166 590.9 654 55.0
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 1.9e-165 587.0 651 55.5
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 1.2e-164 584.3 661 54.0
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 2.1e-164 583.6 658 56.5
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 1.2e-159 567.8 649 55.5
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 3.4e-159 566.2 683 52.3
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 2.2e-158 563.5 663 50.2
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 4.2e-157 559.3 659 52.8
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 2.7e-156 556.6 666 49.2
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 6.7e-155 552.0 635 57.8
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.5e-154 550.1 669 50.5
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 1.7e-153 547.4 677 50.5
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 6.3e-153 545.4 669 49.2
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 5.3e-152 542.3 667 50.2
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 3.4e-151 539.7 656 51.7
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 1.1e-149 534.6 644 52.3
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 7.2e-149 531.9 665 49.9
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 7.9e-148 528.5 676 48.8
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 1.0e-147 528.1 673 49.8
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 1.8e-147 527.3 668 51.2
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 2.6e-146 523.5 648 49.2
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 2.6e-146 523.5 658 50.5
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 2.2e-145 520.4 642 49.4
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 4.8e-145 519.2 638 54.2
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.4e-144 516.9 664 48.0
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 3.1e-144 516.5 656 49.2
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 3.1e-144 516.5 645 52.4
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 1.5e-143 514.2 644 49.2
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 5.9e-143 512.3 660 48.5
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 1.3e-142 511.1 664 47.9
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 3.8e-142 509.6 638 49.4
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 6.5e-142 508.8 669 46.5
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 9.4e-141 505.0 651 47.5
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.1e-140 503.8 664 46.8
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 3.0e-139 500.0 666 49.1
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 2.0e-138 497.3 663 48.6
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 5.7e-138 495.7 663 49.6
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 7.4e-138 495.4 664 48.2
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 9.7e-138 495.0 646 48.5
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.7e-137 494.2 658 46.0
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 6.3e-137 492.3 670 49.6
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.3e-134 484.6 659 46.3
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 1.5e-133 481.1 639 48.8
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.2e-132 478.0 700 43.7
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 1.6e-132 477.6 591 51.6
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 3.0e-131 473.4 654 47.7
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 1.5e-130 471.1 687 46.1
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 3.3e-130 469.9 622 48.9
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 4.4e-130 469.5 671 45.9
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 5.7e-130 469.2 646 46.9
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 7.5e-130 468.8 650 46.0
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 3.7e-129 466.5 714 44.5
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 4.8e-129 466.1 583 49.4
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 3.1e-128 463.4 641 49.8
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 7.7e-127 458.8 649 43.0
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 2.9e-126 456.8 501 54.1
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.0e-123 448.4 677 46.5
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 2.4e-120 437.2 583 45.6
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 2.0e-119 434.1 631 46.9
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 8.9e-115 418.7 633 44.1
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 1.2e-114 418.3 650 46.9
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 2.0e-114 417.5 505 51.7
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 2.6e-114 417.2 458 59.8
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 2.8e-113 413.7 668 44.5
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 4.9e-113 412.9 645 44.5
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 8.3e-113 412.1 676 45.3
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 1.3e-110 404.8 634 44.3
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 1.1e-109 401.7 669 42.2
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 1.2e-108 398.3 666 45.3
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 8.0e-108 395.6 668 43.1
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 1.0e-107 395.2 665 43.6
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 3.4e-106 390.2 652 44.6
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 2.4e-104 384.0 405 53.1
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 1.6e-103 381.3 670 39.6
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 7.8e-103 379.0 555 44.7
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 3.3e-101 373.6 673 40.7
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 2.0e-98 364.4 677 39.3
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 2.1e-95 354.4 662 39.4
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 3.5e-95 353.6 387 55.0
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 5.1e-94 349.7 646 40.4
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 7.3e-93 345.9 667 39.9
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 1.6e-92 344.7 387 52.5
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 3.6e-92 343.6 572 44.6
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 2.6e-90 337.4 570 42.1
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 7.5e-90 335.9 325 53.2
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.6e-87 328.2 573 39.1
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 7.3e-85 319.3 461 44.7
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 2.4e-83 314.3 276 56.2
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 1.2e-79 302.0 276 54.3
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.4e-75 288.5 298 52.7
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 1.8e-75 288.1 220 63.2
vmacro16170 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 4.4e-74 283.5 413 50.6
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.0e-70 272.3 375 52.5
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 6.6e-70 269.6 720 34.7
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.1e-69 268.9 585 35.2
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 2.5e-69 267.7 241 56.0
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 5.3e-67 260.0 266 54.9
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 3.2e-64 250.8 637 34.1
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 5.6e-61 240.0 313 44.4
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.4e-59 235.3 479 38.0
vmacro16172 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 9.0e-59 232.6 434 44.2
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.1e-56 225.7 258 50.8
Nitab4.5_0000229g0020 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.4e-56 225.3 304 52.6
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.2e-56 223.8 233 54.5
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 1.6e-55 221.9 183 58.5
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 8.7e-54 216.1 698 31.8
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 6.2e-52 209.9 606 30.7
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 5.3e-51 206.8 187 60.4
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 9.0e-51 206.1 282 45.7
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 5.8e-50 203.4 659 27.8
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 1.1e-45 189.1 233 50.2
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 3.3e-45 187.6 182 51.6
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 9.7e-45 186.0 149 61.7
Aqoxy5G03687 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 4.6e-39 167.2 247 43.7
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.7e-37 160.2 397 37.3
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 1.8e-35 155.2 119 63.0
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 1.8e-35 155.2 110 63.6
Hma1.2p1_1533F.1_g289350 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 4.5e-34 150.6 151 54.3
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 5.0e-33 147.1 173 41.0
BolC4t26878H Brassica oleracea HOM05D003570 ORTHO05D004207 3.6e-31 141.0 207 44.9
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 1.5e-29 135.6 160 50.0
AT4G05523 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 2.0e-29 135.2 203 41.9
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.3e-28 132.5 104 65.4
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 1.1e-27 129.4 198 39.9
BcaC05g25085 Brassica carinata HOM05D003570 ORTHO05D004207 2.4e-27 128.3 275 37.1
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 5.3e-27 127.1 212 42.0
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 7.0e-27 126.7 212 38.7
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 1.2e-26 125.9 195 40.0
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 1.2e-26 125.9 195 40.0
CDE06G0651 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 2.6e-26 124.8 272 41.9
EL10As2g23164 Beta vulgaris HOM05D003570 ORTHO05D004207 1.0e-25 122.9 160 46.2
TAR374G0931 Trochodendron aralioides HOM05D003570 ORTHO05D004207 2.2e-25 121.7 504 27.4
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 3.8e-25 120.9 314 29.0
BcaC02g08536 Brassica carinata HOM05D003570 ORTHO05D004207 8.5e-25 119.8 166 43.4
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.6e-23 115.5 140 47.1
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 2.1e-23 115.2 89 57.3
BcaC06g34341 Brassica carinata HOM05D003570 ORTHO05D004207 3.6e-23 114.4 194 35.6
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 2.6e-21 108.2 309 29.1
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.7e-21 107.1 127 48.0
C04p53220 Brassica napus HOM05D003570 ORTHO05D004207 2.6e-18 98.2 154 40.9
PSO063G3896 Papaver somniferum HOM05D003570 ORTHO05D004207 1.0e-17 96.3 250 40.4
PRCOL_00001147 Prasinoderma coloniale HOM05D003570 ORTHO05D004207 1.0e-17 96.3 291 25.8
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 1.7e-17 95.5 87 55.2
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 2.5e-16 91.7 193 32.6
AagrBONN_evm.TU.Sc2ySwM_344.4464 Anthoceros agrestis HOM05D003570 ORTHO05D004207 2.1e-15 88.6 478 29.3
AL2G22730 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 2.1e-15 88.6 115 47.8
Actinidia15112 Actinidia chinensis HOM05D003570 ORTHO05D004207 6.1e-15 87.0 91 50.5
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 6.1e-15 87.0 186 32.8
unitig_22.g6425 Utricularia gibba HOM05D003570 ORTHO05D004207 2.3e-14 85.1 191 37.2
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 3.0e-14 84.7 75 60.0
FAN18G0384 Fragaria x ananassa HOM05D003570 ORTHO05D004207 8.8e-14 83.2 171 38.0
CARHR253470 Cardamine hirsuta HOM05D003570 ORTHO05D004207 2.6e-13 81.6 145 40.0
FvH4_5g15741 Fragaria vesca HOM05D003570 ORTHO05D004207 7.5e-13 80.1 166 38.0
C03p39130 Brassica napus HOM05D003570 ORTHO05D004207 1.7e-12 79.0 104 41.3
MD05G1151500 Malus domestica HOM05D003570 ORTHO05D004207 4.8e-12 77.4 51 74.5
EL10Ac1g01653 Beta vulgaris HOM05D003570 ORTHO05D004207 1.8e-11 75.5 52 67.3
Sp2g10400 Schrenkiella parvula HOM05D003570 ORTHO05D004207 5.3e-11 73.9 109 43.1
C07p30170 Brassica napus HOM05D003570 ORTHO05D004207 9.1e-11 73.2 69 50.7
QL93p0107_0801 Quercus lobata HOM05D003570 ORTHO05D004207 3.8e-09 67.8 151 39.7
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 5.0e-09 67.4 74 48.6
CDE06G1606 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 6.5e-09 67.0 87 46.0
C07p30160 Brassica napus HOM05D003570 ORTHO05D004207 8.5e-09 66.6 76 47.4
Hund04894 Selenicereus undatus HOM05D003570 ORTHO05D004207 4.2e-08 64.3 68 47.1
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 1.2e-07 62.8 122 32.8
C02p46270 Brassica napus HOM05D003570 ORTHO05D027618 1.8e-06 58.9 77 39.0
A02p29200 Brassica napus HOM05D003570 ORTHO05D027618 2.3e-06 58.5 76 39.5
BraA02t07950Z Brassica rapa HOM05D003570 ORTHO05D027618 2.3e-06 58.5 76 39.5
Solyc04g026000.2 Solanum lycopersicum HOM05D003570 ORTHO05D004207 4.0e-06 57.8 130 30.0
CAN.G149.33 Capsicum annuum HOM05D001546 ORTHO05D015824 5.2e-06 57.4 102 42.2


User provided reference genes

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