Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000305001 Vitis vinifera HOM05D000747 ORTHO05D018232 1.9e-50 202.2 104 100.0
GSVIVG01030347001 Vitis vinifera HOM05D000747 ORTHO05D018232 1.3e-43 179.5 104 91.3
GSVIVG01030902001 Vitis vinifera HOM05D000747 ORTHO05D018232 2.8e-41 171.8 98 88.8
GSVIVG01009206001 Vitis vinifera HOM05D000747 ORTHO05D001683 1.7e-14 82.8 64 67.2
Thecc.08G073800 Theobroma cacao HOM05D000747 ORTHO05D001683 7.4e-10 67.4 73 54.8
Cfa013814 Carpinus fangiana HOM05D000747 ORTHO05D001683 2.8e-09 65.5 61 55.7
Haze_22488 Corylus avellana HOM05D000747 ORTHO05D001683 2.8e-09 65.5 61 55.7
CiPaw.07G163100 Carya illinoinensis HOM05D000747 ORTHO05D001683 4.8e-09 64.7 76 50.0
Cpa.g.sc21.42 Carica papaya HOM05D000747 ORTHO05D001683 6.3e-09 64.3 80 47.5
Duzib041G0164 Durio zibethinus HOM05D000747 ORTHO05D001683 6.3e-09 64.3 68 55.9
Lj4C86T7 Lonicera japonica HOM05D000747 ORTHO05D001683 8.2e-09 63.9 76 47.4
Sabra02G0087000 Salix brachista HOM05D000747 ORTHO05D001683 8.2e-09 63.9 74 52.7
Gohir.A05G264300 Gossypium hirsutum HOM05D000747 ORTHO05D001683 1.1e-08 63.5 66 57.6
MD15G1388600 Malus domestica HOM05D000747 ORTHO05D001683 1.1e-08 63.5 61 59.0
Potri.002G110500 Populus trichocarpa HOM05D000747 ORTHO05D001683 1.1e-08 63.5 53 62.3
Duzib116G0124 Durio zibethinus HOM05D000747 ORTHO05D001683 1.4e-08 63.2 68 55.9
Manes.18G057015 Manihot esculenta HOM05D000747 ORTHO05D001683 1.4e-08 63.2 64 53.1
CSS0007399 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D001683 1.8e-08 62.8 64 50.0
CiPaw.08G057100 Carya illinoinensis HOM05D000747 ORTHO05D001683 2.4e-08 62.4 76 47.4
Dinv44877 Davidia involucrata HOM05D000747 ORTHO05D001683 3.1e-08 62.0 51 62.7
Gohir.D05G266800 Gossypium hirsutum HOM05D000747 ORTHO05D001683 3.1e-08 62.0 66 56.1
Gorai.009G278900 Gossypium raimondii HOM05D000747 ORTHO05D001683 3.1e-08 62.0 66 56.1
Prupe.1G535000 Prunus persica HOM05D000747 ORTHO05D001683 4.1e-08 61.6 61 57.4
Dinv42593 Davidia involucrata HOM05D000747 ORTHO05D001683 5.3e-08 61.2 61 52.5
Duzib093G1788 Durio zibethinus HOM05D000747 ORTHO05D001683 5.3e-08 61.2 66 54.5
CSS0014613 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D018232 6.9e-08 60.8 64 48.4
COL.COLO4_35278 Corchorus olitorius HOM05D000747 ORTHO05D001683 6.9e-08 60.8 65 56.9
Manes.05G189200 Manihot esculenta HOM05D000747 ORTHO05D001683 9.1e-08 60.5 64 51.6
Actinidia21218 Actinidia chinensis HOM05D000747 ORTHO05D015226 1.5e-07 59.7 64 51.6
Actinidia29657 Actinidia chinensis HOM05D000747 ORTHO05D001683 2.0e-07 59.3 79 44.3
CsaV3_2G030130 Cucumis sativus L. HOM05D000747 ORTHO05D001683 2.0e-07 59.3 75 50.7
Hma1.2p1_0125F.1_g058695 Hydrangea macrophylla HOM05D000747 ORTHO05D001683 2.0e-07 59.3 61 50.8
TWI12G0371 Tripterygium wilfordii HOM05D000747 ORTHO05D001683 2.0e-07 59.3 80 45.0
Cc10_g08380 Coffea canephora HOM05D000747 ORTHO05D001683 2.6e-07 58.9 61 52.5
Gohir.D06G030100 Gossypium hirsutum HOM05D000747 ORTHO05D001683 2.6e-07 58.9 47 63.8
Gorai.010G033100 Gossypium raimondii HOM05D000747 ORTHO05D001683 2.6e-07 58.9 47 63.8
Rhsim07G0213300 Rhododendron simsii HOM05D000747 ORTHO05D001683 2.6e-07 58.9 82 45.1
Sed0015542 Sechium edule HOM05D000747 ORTHO05D001683 2.6e-07 58.9 51 64.7
HanXRQChr05g0163491 Helianthus annuus HOM05D000747 ORTHO05D001683 3.4e-07 58.5 55 54.5
MD08G1203000 Malus domestica HOM05D000747 ORTHO05D001683 3.4e-07 58.5 61 55.7
TWI56G1479 Tripterygium wilfordii HOM05D000747 ORTHO05D001683 3.4e-07 58.5 61 49.2
MELO3C011072.2 Cucumis melo HOM05D000747 ORTHO05D001683 4.5e-07 58.2 75 49.3
Oeu040883.2 Olea europaea HOM05D000747 ORTHO05D001683 4.5e-07 58.2 61 54.1
Actinidia19252 Actinidia chinensis HOM05D000747 ORTHO05D001683 5.9e-07 57.8 64 50.0
Atru.chr13.978 Acer truncatum HOM05D000747 ORTHO05D001683 7.7e-07 57.4 52 57.7
Actinidia10269 Actinidia chinensis HOM05D000747 ORTHO05D001683 7.7e-07 57.4 64 50.0
Gohir.A05G218400 Gossypium hirsutum HOM05D000747 ORTHO05D001683 7.7e-07 57.4 73 50.7
QL09p018620 Quercus lobata HOM05D000747 ORTHO05D001683 1.0e-06 57.0 61 47.5
Oeu038170.1 Olea europaea HOM05D000747 ORTHO05D001683 1.3e-06 56.6 58 56.9
Sed0006720 Sechium edule HOM05D000747 ORTHO05D001683 1.3e-06 56.6 59 57.6
THA.LOC104799856 Tarenaya hassleriana HOM05D000747 ORTHO05D001683 1.3e-06 56.6 52 53.8
FAN08G2863 Fragaria x ananassa HOM05D000747 ORTHO05D001683 1.7e-06 56.2 67 53.7
Gohir.A06G030900 Gossypium hirsutum HOM05D000747 ORTHO05D001683 1.7e-06 56.2 47 61.7
ClCG08G011550 Citrullus lanatus HOM05D000747 ORTHO05D001683 2.2e-06 55.8 68 52.9
Sc15g0003080 Simmondsia chinensis HOM05D000747 ORTHO05D001683 2.2e-06 55.8 54 55.6
Glyma.04G096900 Glycine max HOM05D000747 ORTHO05D001683 2.9e-06 55.5 46 65.2
Gohir.D05G221100 Gossypium hirsutum HOM05D000747 ORTHO05D001683 2.9e-06 55.5 73 47.9
Gorai.009G228200 Gossypium raimondii HOM05D000747 ORTHO05D001683 2.9e-06 55.5 73 47.9
Medtr3g099777 Medicago truncatula HOM05D000747 ORTHO05D001683 2.9e-06 55.5 35 80.0
Psat5g049800 Pisum sativum HOM05D000747 ORTHO05D001683 2.9e-06 55.5 47 63.8
arahy.Tifrunner.gnm1.ann1.I0605Y Arachis hypogaea HOM05D000747 ORTHO05D001683 5.0e-06 54.7 57 52.6
arahy.Tifrunner.gnm1.ann1.PS3G0C Arachis hypogaea HOM05D000747 ORTHO05D001683 5.0e-06 54.7 57 52.6
FvH4_5g34290 Fragaria vesca HOM05D000747 ORTHO05D001683 5.0e-06 54.7 67 52.2
FAN18G0248 Fragaria x ananassa HOM05D000747 ORTHO05D001683 5.0e-06 54.7 67 52.2
Lsat_1_v5_gn_6_107380 Lactuca sativa HOM05D000747 ORTHO05D001683 5.0e-06 54.7 40 72.5
DCAR_009555 Daucus carota HOM05D000747 ORTHO05D001683 6.5e-06 54.3 61 50.8
FAN04G1446 Fragaria x ananassa HOM05D000747 ORTHO05D001683 6.5e-06 54.3 67 52.2
MBI16_g27902_MAGBIO Magnolia biondii HOM05D000747 ORTHO05D001683 6.5e-06 54.3 61 47.5
Phvul.009G034900 Phaseolus vulgaris HOM05D000747 ORTHO05D001683 6.5e-06 54.3 46 63.0
Actinidia21210 Actinidia chinensis HOM05D000747 ORTHO05D018232 8.5e-06 53.9 88 39.8
AL8G23550 Arabidopsis lyrata HOM05D000747 ORTHO05D001683 8.5e-06 53.9 57 49.1
arahy.Tifrunner.gnm1.ann1.3KGV08 Arachis hypogaea HOM05D000747 ORTHO05D001683 8.5e-06 53.9 56 58.9
arahy.Tifrunner.gnm1.ann1.CI62AJ Arachis hypogaea HOM05D000747 ORTHO05D001683 8.5e-06 53.9 56 58.9
DCAR_020028 Daucus carota HOM05D000747 ORTHO05D001683 8.5e-06 53.9 48 60.4


User provided reference genes

Program Settings