Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000124001 Vitis vinifera HOM05D000726 ORTHO05D007554 0.0e+00 1650.6 849 100.0
Dinv26921 Davidia involucrata HOM05D000726 ORTHO05D007554 2.6e-270 935.6 1013 54.8
CSS0015479 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.3e-264 916.8 1049 52.0
CSS0022432 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.1e-263 913.7 1049 51.9
Haze_15292 Corylus avellana HOM05D000726 ORTHO05D007554 1.1e-257 893.6 1010 52.5
TAR376G0399 Trochodendron aralioides HOM05D000726 ORTHO05D007554 7.4e-257 891.0 1050 51.2
Actinidia36435 Actinidia chinensis HOM05D000726 ORTHO05D007554 6.9e-255 884.4 1048 50.7
QL06p039670 Quercus lobata HOM05D000726 ORTHO05D007554 9.0e-255 884.0 1044 50.3
Cfa004123 Carpinus fangiana HOM05D000726 ORTHO05D007554 9.9e-254 880.6 1010 51.7
Atru.chr3.177 Acer truncatum HOM05D000726 ORTHO05D007554 3.9e-250 868.6 975 51.6
Manes.13G112300 Manihot esculenta HOM05D000726 ORTHO05D007554 6.2e-248 861.3 1041 49.2
Atru.BG.105.p Acer truncatum HOM05D000726 ORTHO05D007554 8.2e-248 860.9 936 53.0
Nn4g25316 Nelumbo nucifera HOM05D000726 ORTHO05D007554 8.4e-245 850.9 986 49.8
Potri.007G055400 Populus trichocarpa HOM05D000726 ORTHO05D007554 2.3e-242 842.8 981 51.5
vmacro05404 Vaccinium macrocarpon HOM05D000726 ORTHO05D007554 3.7e-240 835.5 1051 47.9
CANSAT01G3261 Cannabis sativa HOM05D000726 ORTHO05D007554 1.0e-237 827.4 1006 50.0
Duzib147G0272 Durio zibethinus HOM05D000726 ORTHO05D007554 5.0e-237 825.1 1007 50.4
TWI09G1290 Tripterygium wilfordii HOM05D000726 ORTHO05D007554 3.6e-235 818.9 1003 49.2
MD02G1184600 Malus domestica HOM05D000726 ORTHO05D007554 1.8e-234 816.6 1043 47.6
Gohir.D11G207900 Gossypium hirsutum HOM05D000726 ORTHO05D007554 8.8e-234 814.3 1001 48.6
RcHm_v2.0_Chr2g0138631 Rosa chinensis HOM05D000726 ORTHO05D007554 1.1e-233 813.9 1036 46.9
Gohir.A11G215400 Gossypium hirsutum HOM05D000726 ORTHO05D007554 3.3e-233 812.4 1001 48.5
Gorai.007G222900 Gossypium raimondii HOM05D000726 ORTHO05D007554 7.4e-233 811.2 1001 48.4
Ciclev10024730m.g Citrus clementina HOM05D000726 ORTHO05D007554 1.3e-232 810.4 1012 48.0
FAN05G3645 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.8e-231 806.6 999 48.1
FAN14G0573 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.2e-230 803.9 1000 48.0
FvH4_6g31560 Fragaria vesca HOM05D000726 ORTHO05D007554 2.9e-229 799.3 999 47.8
Eucgr.H02305 Eucalyptus grandis HOM05D000726 ORTHO05D007554 1.4e-228 797.0 985 49.6
HanXRQChr12g0373111 Helianthus annuus HOM05D000726 ORTHO05D007554 2.2e-224 783.1 949 48.5
Lalb_Chr09g0323571 Lupinus albus HOM05D000726 ORTHO05D007554 1.1e-223 780.8 1007 47.1
Aqoxy6G02647 Aquilegia oxysepala HOM05D000726 ORTHO05D007554 2.4e-223 779.6 984 47.2
Nitab4.5_0006813g0010 Nicotiana tabacum HOM05D000726 ORTHO05D007554 4.1e-223 778.9 1006 46.3
Nitab4.5_0001417g0030 Nicotiana tabacum HOM05D000726 ORTHO05D007554 7.0e-223 778.1 992 46.8
Glyma.01G193500 Glycine max HOM05D000726 ORTHO05D007554 9.4e-220 767.7 1016 46.4
Lj7A95G20 Lonicera japonica HOM05D000726 ORTHO05D007554 9.4e-220 767.7 975 48.7
MSTRG.23676 Avicennia marina HOM05D000726 ORTHO05D007554 8.0e-219 764.6 988 47.1
arahy.Tifrunner.gnm1.ann1.1ZHU8Z Arachis hypogaea HOM05D000726 ORTHO05D007554 1.0e-218 764.2 1005 46.3
Lj2g0006912 Lotus japonicus HOM05D000726 ORTHO05D007554 3.0e-218 762.7 1011 46.7
THA.LOC104819266 Tarenaya hassleriana HOM05D000726 ORTHO05D007554 3.9e-218 762.3 1008 45.5
arahy.Tifrunner.gnm1.ann1.6361M0 Arachis hypogaea HOM05D000726 ORTHO05D007554 3.3e-217 759.2 962 47.3
VMungo1215G2083 Vigna mungo HOM05D000726 ORTHO05D007554 4.4e-217 758.8 994 45.6
Hund16395 Selenicereus undatus HOM05D000726 ORTHO05D007554 9.7e-217 757.7 1001 47.2
PGR102G1358 Punica granatum HOM05D000726 ORTHO05D007554 2.2e-216 756.5 1006 46.0
Phvul.002G011500 Phaseolus vulgaris HOM05D000726 ORTHO05D007554 8.2e-216 754.6 1011 45.4
Migut.H00354 Erythranthe guttata HOM05D000726 ORTHO05D007554 9.1e-215 751.1 976 46.8
Sed0012994 Sechium edule HOM05D000726 ORTHO05D007554 9.1e-215 751.1 1008 46.6
Cc07_g07020 Coffea canephora HOM05D000726 ORTHO05D007554 1.0e-213 747.7 966 47.4
CsaV3_6G044070 Cucumis sativus L. HOM05D000726 ORTHO05D007554 1.7e-213 746.9 1008 46.2
Medtr5g015600 Medicago truncatula HOM05D000726 ORTHO05D007554 2.2e-213 746.5 1041 43.8
EL10Ac6g15628 Beta vulgaris HOM05D000726 ORTHO05D007554 2.9e-213 746.1 1000 45.8
ClCG01G017520 Citrullus lanatus HOM05D000726 ORTHO05D007554 3.8e-213 745.7 1001 46.7
Solyc03g044020.4 Solanum lycopersicum HOM05D000726 ORTHO05D007554 3.8e-213 745.7 982 45.1
Ca_24700_v3 Cicer arietinum L. HOM05D000726 ORTHO05D007554 6.5e-213 745.0 1009 45.9
PSO675G6338 Papaver somniferum HOM05D000726 ORTHO05D007554 8.5e-213 744.6 1000 46.2
Sc03g0002340 Simmondsia chinensis HOM05D000726 ORTHO05D007554 1.5e-212 743.8 1009 45.9
PGSC0003DMG400009094 Solanum tuberosum HOM05D000726 ORTHO05D007554 1.5e-212 743.8 982 45.0
TPR.G34847 Trifolium pratense HOM05D000726 ORTHO05D007554 5.5e-212 741.9 1006 45.5
Sopen03g007820 Solanum pennellii HOM05D000726 ORTHO05D007554 7.2e-212 741.5 982 44.9
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 1.6e-211 740.3 952 49.2
FAN02G1686 Fragaria x ananassa HOM05D000726 ORTHO05D007554 2.1e-211 740.0 927 48.3
Lsat_1_v5_gn_4_160781 Lactuca sativa HOM05D000726 ORTHO05D007554 8.0e-211 738.0 937 46.4
Peaxi162Scf00118g01929 Petunia axillaris HOM05D000726 ORTHO05D007554 1.4e-210 737.3 983 45.0
PSO541G0636 Papaver somniferum HOM05D000726 ORTHO05D007554 2.0e-209 733.4 1000 46.0
MELO3C007629.2 Cucumis melo HOM05D000726 ORTHO05D007554 4.4e-209 732.3 1012 46.0
CAN.G278.12 Capsicum annuum HOM05D000726 ORTHO05D007554 1.7e-208 730.3 983 44.4
Sp5g19220 Schrenkiella parvula HOM05D000726 ORTHO05D007554 1.1e-207 727.6 1005 44.2
Aa31LG2G2150 Aethionema arabicum HOM05D000726 ORTHO05D007554 1.4e-207 727.2 982 44.2
COL.COLO4_11566 Corchorus olitorius HOM05D000726 ORTHO05D007554 1.8e-207 726.9 1007 46.4
Thhalv10000018m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 3.5e-206 722.6 962 44.5
CARHR056360 Cardamine hirsuta HOM05D000726 ORTHO05D007554 5.9e-206 721.8 996 45.0
AL2G19510 Arabidopsis lyrata HOM05D000726 ORTHO05D007554 7.7e-206 721.5 1003 44.3
AT1G64960 Arabidopsis thaliana HOM05D000726 ORTHO05D007554 1.3e-205 720.7 970 45.1
AUR62003999 Chenopodium quinoa HOM05D000726 ORTHO05D007554 1.7e-205 720.3 970 45.6
Thhalv10023223m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 1.9e-204 716.8 985 43.9
Carub.0002s1010 Capsella rubella HOM05D000726 ORTHO05D007554 2.5e-204 716.5 1003 43.9
Ah.03g140460 Amaranthus hybridus HOM05D000726 ORTHO05D007554 2.7e-203 713.0 984 44.1
Thhalv10001287m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 5.2e-202 708.8 944 44.4
FAN09G4729 Fragaria x ananassa HOM05D000726 ORTHO05D007554 2.6e-201 706.4 913 46.8
AUR62040247 Chenopodium quinoa HOM05D000726 ORTHO05D007554 8.3e-200 701.4 980 45.7
Psat2g171280 Pisum sativum HOM05D000726 ORTHO05D007554 3.1e-199 699.5 976 45.4
C06p38860 Brassica napus HOM05D000726 ORTHO05D007554 4.1e-199 699.1 994 44.2
BolC6t38979H Brassica oleracea HOM05D000726 ORTHO05D007554 2.0e-198 696.8 995 44.3
ECA232G2303 Erigeron canadensis HOM05D000726 ORTHO05D007554 1.7e-197 693.7 945 46.0
BraA07t30892Z Brassica rapa HOM05D000726 ORTHO05D007554 2.3e-197 693.3 993 44.2
Sabra07G0047700 Salix brachista HOM05D000726 ORTHO05D007554 2.3e-197 693.3 909 47.9
SHI31766 Sapria himalayana HOM05D000726 ORTHO05D007554 4.2e-196 689.1 974 44.3
SGA_v2.0_scaffold15G07449 Striga asiatica HOM05D000726 ORTHO05D007554 9.8e-193 677.9 1039 41.5
DCAR_010826 Daucus carota HOM05D000726 ORTHO05D007554 1.2e-187 661.0 988 43.2
BcaB03g15339 Brassica carinata HOM05D000726 ORTHO05D007554 6.1e-187 658.7 1002 42.1
unitig_0.g505 Utricularia gibba HOM05D000726 ORTHO05D007554 3.4e-177 626.3 883 42.6
Prupe.6G221900 Prunus persica HOM05D000726 ORTHO05D007554 1.9e-172 610.5 404 76.2
Cpa.g.sc6.26 Carica papaya HOM05D000726 ORTHO05D007554 3.7e-168 596.3 403 74.7
Thhalv10006613m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 2.4e-167 593.6 995 39.2
CDE04G3158 Ceratophyllum demersum HOM05D000726 ORTHO05D007554 3.2e-167 593.2 834 45.1
Thecc.01G071800 Theobroma cacao HOM05D000726 ORTHO05D007554 7.3e-164 582.0 494 63.0
Zm00001eb051460 Zea mays HOM05D000726 ORTHO05D007554 1.2e-161 574.7 962 38.0
SalBow3G2688 Salvia bowleyana HOM05D000726 ORTHO05D007554 5.8e-161 572.4 892 41.4
A07p32680 Brassica napus HOM05D000726 ORTHO05D007554 5.4e-143 512.7 501 57.1
ATR0208G028 Amborella trichopoda HOM05D000726 ORTHO05D007554 6.0e-142 509.2 404 63.6
Os03g0616500 Oryza sativa ssp. japonica HOM05D000726 ORTHO05D007554 6.5e-120 436.0 406 55.4
HPP92_014039 Vanilla planifolia HOM05D000726 ORTHO05D007554 6.9e-114 416.0 309 67.0
SMO364G0657 Selaginella moellendorffii HOM05D000726 ORTHO05D007554 1.0e-109 402.1 405 52.6
SEGI_06920 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 3.0e-109 400.6 401 52.1
Mapoly0045s0033 Marchantia polymorpha HOM05D000726 ORTHO05D007554 1.1e-108 398.7 397 51.6
AagrBONN_evm.TU.Sc2ySwM_117.495 Anthoceros agrestis HOM05D000726 ORTHO05D007554 2.2e-107 394.4 405 51.6
SEGI_38739 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 4.8e-99 366.7 344 54.9
Glyma.11G048432 Glycine max HOM05D000726 ORTHO05D007554 9.1e-98 362.5 236 77.1
HPP92_028352 Vanilla planifolia HOM05D000726 ORTHO05D007554 3.2e-95 354.0 368 52.2
CiPaw.01G005300 Carya illinoinensis HOM05D000726 ORTHO05D007554 2.9e-88 330.9 425 45.9
Cpa.g.sc6.25 Carica papaya HOM05D000726 ORTHO05D007554 3.7e-75 287.3 419 40.3
CiPaw.01G005400 Carya illinoinensis HOM05D000726 ORTHO05D007554 1.5e-68 265.4 167 79.0
CBR_g29418 Chara braunii HOM05D000019 ORTHO05D000002 7.5e-60 236.5 340 35.9
PRCOL_00006071 Prasinoderma coloniale HOM05D000726 ORTHO05D007554 1.2e-57 229.2 339 36.0
Glyma.11G048366 Glycine max HOM05D000726 ORTHO05D007554 1.1e-55 222.6 368 38.6
HPP92_014040 Vanilla planifolia HOM05D000726 ORTHO05D007554 3.6e-54 217.6 316 37.7
Cre06.g262800 Chlamydomonas reinhardtii HOM05D000726 ORTHO05D007554 3.6e-46 191.0 329 35.0
Nn1g04578 Nelumbo nucifera HOM05D000726 ORTHO05D007554 7.3e-39 166.8 186 46.2
ATR0208G027 Amborella trichopoda HOM05D000726 ORTHO05D007554 3.1e-37 161.4 321 37.4
Oeu003558.1 Olea europaea HOM05D000726 ORTHO05D007554 3.1e-37 161.4 111 72.1
RcHm_v2.0_Chr2g0138441 Rosa chinensis HOM05D000726 ORTHO05D007554 2.0e-36 158.7 182 52.2
Sabra16G0084600 Salix brachista HOM05D000726 ORTHO05D007554 5.1e-32 144.1 111 64.9
Sabra11G0026400 Salix brachista HOM05D000726 ORTHO05D007554 4.3e-31 141.0 100 69.0
Sabra11G0056500 Salix brachista HOM05D000726 ORTHO05D007554 1.4e-29 136.0 100 68.0
Nn1g04577 Nelumbo nucifera HOM05D000726 ORTHO05D007554 1.2e-28 132.9 132 48.5
SEGI_23696 Sequoiadendron giganteum HOM05D000726 ORTHO05D000001 3.2e-26 124.8 338 31.4
Lj7C94G0 Lonicera japonica HOM05D000726 ORTHO05D007554 7.4e-15 87.0 77 63.6
Lsat_1_v5_gn_2_113660 Lactuca sativa HOM05D000726 ORTHO05D007554 6.3e-14 84.0 61 67.2
Zm00001eb060820 Zea mays HOM05D000726 ORTHO05D007554 5.5e-10 70.9 143 30.1


User provided reference genes

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