Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 1.0e-109 400.2 217 100.0
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 3.0e-98 362.1 208 95.7
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 2.2e-64 249.6 207 67.6
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 4.3e-60 235.3 210 65.7
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 1.6e-59 233.4 225 62.2
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 3.1e-58 229.2 215 60.0
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 4.0e-58 228.8 227 61.2
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.2e-57 227.3 197 61.9
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 1.5e-57 226.9 216 61.6
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 9.9e-57 224.2 212 58.0
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 9.9e-57 224.2 211 59.7
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 1.3e-56 223.8 227 60.4
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 1.7e-56 223.4 210 58.1
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.1e-55 220.7 214 57.5
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.1e-55 220.7 214 57.5
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 1.9e-55 219.9 209 60.8
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 2.4e-55 219.5 233 57.5
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 2.4e-55 219.5 209 60.3
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 9.3e-55 217.6 215 59.1
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 1.6e-54 216.9 205 61.5
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 4.6e-54 215.3 237 56.5
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 6.0e-54 214.9 220 58.6
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 1.7e-53 213.4 217 59.0
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 2.3e-53 213.0 215 57.2
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 2.3e-53 213.0 211 57.8
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 2.3e-53 213.0 212 59.9
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 1.1e-52 210.7 210 54.3
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 1.5e-52 210.3 225 57.8
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 1.5e-52 210.3 218 57.3
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 1.9e-52 209.9 213 61.5
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 2.5e-52 209.5 212 58.5
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 3.3e-52 209.1 205 58.5
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 4.3e-52 208.8 225 53.8
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 4.3e-52 208.8 211 56.9
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 7.3e-52 208.0 213 61.0
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 7.3e-52 208.0 217 59.0
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 9.6e-52 207.6 208 56.7
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 9.6e-52 207.6 214 59.3
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 1.6e-51 206.8 216 56.0
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 2.1e-51 206.5 141 77.3
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 6.2e-51 204.9 209 55.0
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 1.1e-50 204.1 217 55.3
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 1.4e-50 203.8 214 56.5
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 1.8e-50 203.4 223 54.7
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 2.4e-50 203.0 219 54.3
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 3.1e-50 202.6 215 55.3
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 5.3e-50 201.8 172 65.1
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 9.0e-50 201.1 216 60.2
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 1.5e-49 200.3 208 54.3
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 2.0e-49 199.9 215 54.0
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 3.4e-49 199.1 215 53.0
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 4.5e-49 198.7 208 56.7
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 7.6e-49 198.0 203 59.1
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 1.7e-48 196.8 206 54.9
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 2.9e-48 196.1 196 59.7
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 6.4e-48 194.9 216 52.8
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 6.4e-48 194.9 217 55.8
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 1.9e-47 193.4 205 55.6
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 1.2e-46 190.7 311 44.7
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.6e-46 190.3 204 57.8
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 6.0e-46 188.3 206 54.9
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 6.0e-46 188.3 156 67.9
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.0e-45 187.6 204 57.4
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.8e-45 186.8 203 57.1
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 2.3e-45 186.4 204 56.9
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 6.7e-45 184.9 216 53.2
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 2.5e-44 183.0 167 60.5
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 5.6e-44 181.8 212 52.8
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 1.1e-42 177.6 208 52.9
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 4.0e-42 175.6 213 53.1
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 2.0e-41 173.3 198 54.0
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 1.3e-40 170.6 211 48.8
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 2.9e-40 169.5 157 58.6
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 3.8e-40 169.1 200 50.5
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 1.4e-39 167.2 203 50.7
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 1.3e-37 160.6 245 44.9
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 1.8e-37 160.2 118 69.5
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 4.3e-36 155.6 211 51.7
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 4.3e-36 155.6 211 45.5
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 9.6e-36 154.5 211 45.5
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 6.9e-34 148.3 206 42.7
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 1.2e-33 147.5 199 47.2
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 2.0e-33 146.7 157 51.0
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 5.8e-33 145.2 206 43.2
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 7.6e-33 144.8 206 42.2
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 4.2e-31 139.0 193 43.5
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 4.6e-30 135.6 201 43.3
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 1.8e-29 133.7 204 42.6
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 2.3e-29 133.3 205 41.0
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 3.9e-29 132.5 154 45.5
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 3.9e-29 132.5 154 45.5
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 8.7e-29 131.3 143 57.3
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.9e-28 130.2 89 77.5
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 6.9e-26 121.7 195 44.1
SHI12778 Sapria himalayana HOM05D006223 ORTHO05D009080 1.0e-21 107.8 193 44.6
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 1.3e-21 107.5 165 44.8
COL.COLO4_11574 Corchorus olitorius HOM05D006223 ORTHO05D009080 1.4e-18 97.4 140 45.0
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 1.3e-16 90.9 206 39.3
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 8.5e-16 88.2 187 40.1
BolC8t50110H Brassica oleracea HOM05D006223 ORTHO05D009080 2.5e-15 86.7 166 37.3
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 4.2e-15 85.9 124 45.2
C08p24920 Brassica napus HOM05D006223 ORTHO05D009080 9.4e-15 84.7 164 36.0
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 1.3e-11 74.3 227 32.2
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 8.2e-11 71.6 202 33.2
CSS0023916 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 9.1e-10 68.2 69 52.2
BcaB05g23172 Brassica carinata HOM05D006223 ORTHO05D009080 3.8e-08 62.8 134 33.6


User provided reference genes

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