Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 1.4e-159 566.2 296 100.0
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 4.9e-131 471.5 296 84.8
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 2.7e-129 465.7 297 82.2
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 1.1e-127 460.3 297 82.8
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 4.3e-127 458.4 297 82.2
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 9.5e-127 457.2 297 81.1
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 3.6e-126 455.3 297 81.5
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 2.3e-125 452.6 297 79.5
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 1.2e-124 450.3 297 81.1
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 2.6e-124 449.1 298 80.2
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 7.5e-124 447.6 297 80.8
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.3e-123 446.8 297 79.5
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 1.7e-123 446.4 299 81.6
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 2.9e-123 445.7 298 81.9
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 3.7e-123 445.3 299 80.6
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 6.4e-123 444.5 298 78.9
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 6.4e-123 444.5 297 78.8
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 8.3e-123 444.1 297 79.1
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 1.4e-122 443.4 297 80.1
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 1.8e-122 443.0 297 78.1
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 4.1e-122 441.8 299 79.3
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 4.1e-122 441.8 297 79.5
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 1.6e-121 439.9 297 79.1
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 4.6e-121 438.3 297 77.8
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 5.9e-121 438.0 298 78.9
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 1.7e-120 436.4 308 76.6
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 2.3e-120 436.0 297 78.8
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 3.0e-120 435.6 305 77.4
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 3.9e-120 435.3 294 79.3
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 3.9e-120 435.3 300 79.0
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 3.9e-120 435.3 297 78.5
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 5.0e-120 434.9 297 78.8
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 5.0e-120 434.9 297 79.8
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 5.0e-120 434.9 297 77.1
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 8.6e-120 434.1 298 77.9
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 8.6e-120 434.1 297 79.1
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 8.6e-120 434.1 296 77.7
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 1.1e-119 433.7 296 77.4
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 1.1e-119 433.7 296 77.0
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 1.5e-119 433.3 297 77.4
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 3.3e-119 432.2 297 78.5
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 4.3e-119 431.8 300 77.0
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 1.2e-118 430.3 296 76.4
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 1.6e-118 429.9 297 78.1
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 1.6e-118 429.9 297 77.4
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 8.0e-118 427.6 297 78.5
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 5.2e-117 424.9 298 76.2
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 6.8e-117 424.5 298 75.8
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 1.2e-116 423.7 314 72.9
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.2e-116 423.7 298 75.8
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.5e-116 423.3 298 75.8
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.5e-116 423.3 298 75.8
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 2.6e-116 422.5 299 75.9
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 3.4e-116 422.2 298 75.8
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.7e-115 419.9 298 75.5
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 4.9e-115 418.3 299 75.3
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 4.9e-115 418.3 304 76.0
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 6.4e-115 417.9 298 76.2
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 1.4e-114 416.8 300 75.7
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 1.9e-114 416.4 299 74.9
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 2.4e-114 416.0 300 76.3
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 3.2e-114 415.6 300 76.0
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 3.2e-114 415.6 297 74.1
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 3.2e-114 415.6 297 75.4
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 4.1e-114 415.2 300 75.3
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 5.4e-114 414.8 299 72.6
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 1.2e-113 413.7 296 75.0
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 6.0e-113 411.4 299 74.2
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 1.0e-112 410.6 297 74.4
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 1.9e-111 406.4 299 73.6
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 1.9e-111 406.4 295 73.6
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 3.3e-111 405.6 298 72.8
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 7.3e-111 404.4 299 73.9
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 1.6e-110 403.3 227 90.3
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 1.6e-110 403.3 300 73.7
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 2.1e-110 402.9 300 73.3
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 4.7e-110 401.7 300 73.7
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 6.2e-110 401.4 297 74.1
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 1.4e-109 400.2 300 73.3
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 1.8e-109 399.8 298 71.8
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 2.6e-108 396.0 300 72.3
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 1.4e-106 390.2 239 84.9
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 1.9e-106 389.8 301 73.1
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 3.2e-106 389.0 298 71.5
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 3.2e-106 389.0 297 72.1
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 3.2e-106 389.0 297 72.1
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 5.4e-106 388.3 298 71.8
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 5.4e-106 388.3 297 72.1
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 5.4e-106 388.3 297 72.1
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 5.4e-106 388.3 297 72.1
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 9.2e-106 387.5 297 72.1
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 1.2e-105 387.1 298 72.5
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 2.1e-105 386.3 297 71.0
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 2.1e-105 386.3 299 71.6
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 2.1e-105 386.3 252 77.4
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 2.1e-105 386.3 298 71.8
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 3.5e-105 385.6 298 72.8
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 1.0e-104 384.0 299 71.2
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 1.0e-104 384.0 298 71.8
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 2.5e-103 379.4 269 74.7
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 2.8e-102 375.9 299 69.6
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 5.8e-100 368.2 285 70.2
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 2.2e-99 366.3 301 69.8
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 7.1e-98 361.3 229 81.2
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 1.6e-97 360.1 234 78.6
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 1.1e-90 337.4 226 75.2
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.1e-90 334.7 252 70.6
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 3.5e-89 332.4 226 74.8
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 6.0e-89 331.6 205 82.4
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 2.1e-86 323.2 228 73.7
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.3e-80 303.9 221 68.3
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 1.9e-79 300.1 229 69.0
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 3.4e-76 289.3 214 75.7
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 3.2e-74 282.7 226 64.6
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 2.8e-70 269.6 203 65.5
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 3.9e-64 249.2 145 84.8
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 1.7e-59 233.8 137 81.0
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 2.3e-48 196.8 222 46.4
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 3.7e-46 189.5 205 46.8
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 6.3e-38 162.2 218 40.4
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 2.9e-35 153.3 86 88.4
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 2.9e-35 153.3 89 88.8
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 3.0e-32 143.3 83 85.5
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 3.2e-26 123.2 64 92.2
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 3.0e-08 63.5 89 53.9


User provided reference genes

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