Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 3.2e-75 285.0 145 100.0
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 2.4e-67 258.8 145 89.0
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 7.0e-67 257.3 145 86.9
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 2.0e-66 255.8 144 87.5
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.7e-66 255.4 145 86.2
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 2.7e-66 255.4 145 87.6
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 3.5e-66 255.0 144 86.8
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 4.6e-66 254.6 145 86.2
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 6.0e-66 254.2 145 85.5
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 6.0e-66 254.2 145 85.5
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 7.8e-66 253.8 145 85.5
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 7.8e-66 253.8 145 84.1
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 1.0e-65 253.4 144 88.9
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 1.3e-65 253.1 145 86.2
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 1.7e-65 252.7 145 84.1
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.7e-65 252.7 145 86.9
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 3.9e-65 251.5 145 85.5
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 3.9e-65 251.5 145 84.8
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 6.6e-65 250.8 145 84.1
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 8.6e-65 250.4 144 85.4
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 8.6e-65 250.4 145 84.8
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 1.9e-64 249.2 145 84.8
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 1.9e-64 249.2 144 82.6
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 3.3e-64 248.4 143 84.6
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 4.3e-64 248.1 145 84.1
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 7.3e-64 247.3 144 82.6
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 9.5e-64 246.9 145 83.4
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 9.5e-64 246.9 144 82.6
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 1.2e-63 246.5 144 83.3
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 1.2e-63 246.5 145 82.1
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 1.6e-63 246.1 145 84.1
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 1.6e-63 246.1 144 84.0
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 2.1e-63 245.7 145 84.8
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 4.7e-63 244.6 144 81.2
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 4.7e-63 244.6 144 83.3
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 6.2e-63 244.2 144 84.0
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 6.2e-63 244.2 145 82.1
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 8.1e-63 243.8 145 82.8
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 1.1e-62 243.4 144 83.3
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 1.8e-62 242.7 144 82.6
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 1.8e-62 242.7 144 82.6
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.3e-62 242.3 145 82.1
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 2.3e-62 242.3 145 82.1
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 8.9e-62 240.4 137 86.1
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 1.2e-61 240.0 144 80.6
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 1.2e-61 240.0 144 81.2
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 2.0e-61 239.2 144 80.6
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 2.6e-61 238.8 145 79.3
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.4e-61 238.4 145 78.6
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 4.4e-61 238.0 144 79.9
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 5.8e-61 237.7 145 80.0
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 5.8e-61 237.7 146 80.8
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 7.5e-61 237.3 145 78.6
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 7.5e-61 237.3 145 80.0
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 7.5e-61 237.3 142 81.0
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 9.9e-61 236.9 137 85.4
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 1.7e-60 236.1 144 79.2
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 2.2e-60 235.7 144 79.2
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 6.4e-60 234.2 144 79.2
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 8.3e-60 233.8 143 79.0
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 3.2e-59 231.9 144 77.8
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 3.2e-59 231.9 144 79.2
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 3.2e-59 231.9 145 77.9
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 5.4e-59 231.1 131 84.0
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 5.4e-59 231.1 144 79.2
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 9.2e-59 230.3 144 77.8
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 1.2e-58 229.9 142 78.2
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 2.1e-58 229.2 144 77.1
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 2.1e-58 229.2 144 77.1
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 2.1e-58 229.2 143 79.7
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.7e-58 228.8 161 70.8
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 2.7e-58 228.8 144 77.8
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 7.8e-58 227.3 145 76.6
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 7.8e-58 227.3 145 76.6
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 1.3e-57 226.5 145 73.8
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 2.3e-57 225.7 144 75.7
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 3.9e-57 224.9 143 77.6
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 2.5e-56 222.2 145 75.2
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 3.3e-56 221.9 145 75.2
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 7.3e-56 220.7 145 75.2
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 7.3e-56 220.7 145 75.9
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 9.5e-56 220.3 154 71.4
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 3.6e-55 218.4 154 72.7
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 3.6e-55 218.4 154 72.7
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 8.1e-55 217.2 144 73.6
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 8.1e-55 217.2 144 73.6
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 8.1e-55 217.2 143 69.9
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 1.1e-54 216.9 144 75.0
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 1.8e-54 216.1 152 73.0
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 1.8e-54 216.1 145 74.5
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 4.0e-54 214.9 144 74.3
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.0e-54 214.9 186 61.3
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 7.6e-53 210.7 144 72.9
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.2e-50 203.4 148 70.3
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 1.2e-50 203.4 145 67.6
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 1.0e-49 200.3 145 64.1
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 1.7e-49 199.5 134 73.1
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 2.3e-49 199.1 145 65.5
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 5.1e-49 198.0 152 66.4
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 9.6e-48 193.7 114 81.6
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 1.8e-46 189.5 114 78.9
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 8.4e-44 180.6 172 58.7
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 7.1e-43 177.6 131 70.2
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 7.3e-40 167.5 95 84.2
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 2.1e-39 166.0 100 82.0
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 1.6e-34 149.8 143 51.7
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 3.7e-31 138.7 143 50.3
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 1.8e-30 136.3 137 48.9
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 5.3e-30 134.8 146 49.3
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 9.9e-29 130.6 90 68.9
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 4.9e-28 128.3 96 66.7
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 3.5e-26 122.1 69 87.0
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.9e-25 118.6 133 51.1
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 3.5e-18 95.5 51 88.2
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 3.5e-18 95.5 51 92.2
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 2.3e-17 92.8 58 75.9
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 4.8e-15 85.1 53 73.6
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 1.1e-11 73.9 129 31.0
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 1.6e-10 70.1 132 33.3
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 5.7e-08 61.6 142 28.2
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.7e-08 61.6 31 87.1
PRCOL_00002748 Prasinoderma coloniale HOM05D006710 ORTHO05D008353 7.4e-08 61.2 139 30.2
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 9.7e-08 60.8 62 50.0


User provided reference genes

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