Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000001001 Vitis vinifera HOM05D004613 ORTHO05D006095 3.8e-63 244.6 117 100.0
Rhsim07G0179300 Rhododendron simsii HOM05D004613 ORTHO05D006095 1.3e-18 96.7 114 47.4
QL03p004304 Quercus lobata HOM05D004613 ORTHO05D006095 1.7e-18 96.3 114 49.1
TWI56G1338 Tripterygium wilfordii HOM05D004613 ORTHO05D006095 4.9e-18 94.7 94 52.1
RcHm_v2.0_Chr3g0454031 Rosa chinensis HOM05D004613 ORTHO05D006095 1.2e-16 90.1 114 46.5
FAN14G4578 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.6e-16 89.7 113 45.1
Prupe.6G330700 Prunus persica HOM05D004613 ORTHO05D006095 1.3e-15 86.7 97 51.5
Cfa006537 Carpinus fangiana HOM05D004613 ORTHO05D006095 3.9e-15 85.1 98 51.0
FvH4_6g05290 Fragaria vesca HOM05D004613 ORTHO05D006095 3.9e-15 85.1 113 44.2
MD04G1209800 Malus domestica HOM05D004613 ORTHO05D006095 3.9e-15 85.1 99 50.5
Thecc.05G300000 Theobroma cacao HOM05D004613 ORTHO05D006095 3.9e-15 85.1 112 46.4
FAN02G3501 Fragaria x ananassa HOM05D004613 ORTHO05D006095 5.1e-15 84.7 113 44.2
MD12G1224400 Malus domestica HOM05D004613 ORTHO05D006095 5.1e-15 84.7 99 51.5
FAN14G3061 Fragaria x ananassa HOM05D004613 ORTHO05D006095 8.6e-15 84.0 115 44.3
CANSAT54G0471 Cannabis sativa HOM05D004613 ORTHO05D006095 3.3e-14 82.0 100 50.0
Potri.013G026700 Populus trichocarpa HOM05D004613 ORTHO05D006095 4.3e-14 81.6 120 45.0
TAR365G0571 Trochodendron aralioides HOM05D004613 ORTHO05D006095 5.6e-14 81.3 98 46.9
FAN09G4458 Fragaria x ananassa HOM05D004613 ORTHO05D006095 9.5e-14 80.5 97 47.4
FAN05G3359 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.2e-13 80.1 113 42.5
Solyc01g098630.3 Solanum lycopersicum HOM05D004613 ORTHO05D006095 1.6e-13 79.7 98 49.0
Sopen01g042180 Solanum pennellii HOM05D004613 ORTHO05D006095 1.6e-13 79.7 98 49.0
FAN05G4103 Fragaria x ananassa HOM05D004613 ORTHO05D006095 2.1e-13 79.3 113 41.6
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 6.2e-13 77.8 111 42.3
PGSC0003DMG400028600 Solanum tuberosum HOM05D004613 ORTHO05D006095 6.2e-13 77.8 98 48.0
Duzib128G1218 Durio zibethinus HOM05D004613 ORTHO05D006095 1.1e-12 77.0 97 48.5
Ciclev10001987m.g Citrus clementina HOM05D004613 ORTHO05D006095 1.4e-12 76.6 115 43.5
ECA232G1001 Erigeron canadensis HOM05D004613 ORTHO05D006095 5.2e-12 74.7 115 40.9
Nn1g02102 Nelumbo nucifera HOM05D004613 ORTHO05D006095 3.4e-11 72.0 98 45.9
Actinidia05726 Actinidia chinensis HOM05D004613 ORTHO05D006095 7.5e-11 70.9 147 34.0
CiPaw.08G167100 Carya illinoinensis HOM05D004613 ORTHO05D006095 7.5e-11 70.9 98 44.9
COL.COLO4_13522 Corchorus olitorius HOM05D004613 ORTHO05D006095 7.5e-11 70.9 93 49.5
Hund07039 Selenicereus undatus HOM05D004613 ORTHO05D006095 2.9e-10 68.9 98 44.9
Eucgr.B02002 Eucalyptus grandis HOM05D004613 ORTHO05D006095 4.9e-10 68.2 101 42.6
Nitab4.5_0015025g0020 Nicotiana tabacum HOM05D004613 ORTHO05D006095 4.9e-10 68.2 131 36.6
Sed0016876 Sechium edule HOM05D004613 ORTHO05D006095 3.2e-09 65.5 108 38.9
Lsat_1_v5_gn_8_116060 Lactuca sativa HOM05D004613 ORTHO05D006095 5.4e-09 64.7 98 41.8
Phvul.007G182600 Phaseolus vulgaris HOM05D004613 ORTHO05D006095 7.1e-09 64.3 110 39.1
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 7.1e-09 64.3 93 44.1
VMungo0720G0951 Vigna mungo HOM05D004613 ORTHO05D006095 9.2e-09 63.9 97 41.2
EL10Ac4g09300 Beta vulgaris HOM05D004613 ORTHO05D006095 2.7e-08 62.4 98 40.8
AUR62005113 Chenopodium quinoa HOM05D004613 ORTHO05D006095 7.8e-08 60.8 106 36.8
MELO3C015343.2 Cucumis melo HOM05D004613 ORTHO05D006095 1.0e-07 60.5 118 35.6
Glyma.20G231400 Glycine max HOM05D004613 ORTHO05D006095 1.3e-07 60.1 97 39.2
Gorai.004G243600 Gossypium raimondii HOM05D004613 ORTHO05D006095 1.3e-07 60.1 95 43.2
Gohir.D08G229400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 1.7e-07 59.7 95 44.2
Gohir.A08G212400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 2.3e-07 59.3 95 43.2
HanXRQChr09g0258721 Helianthus annuus HOM05D004613 ORTHO05D006095 5.1e-07 58.2 102 41.2
Lj5g0014952 Lotus japonicus HOM05D004613 ORTHO05D006095 6.6e-07 57.8 112 36.6


User provided reference genes

Program Settings