Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_7g33300 Fragaria vesca HOM05D004660 ORTHO05D005474 3.2e-110 401.7 199 100.0
FAN10G1296 Fragaria x ananassa HOM05D004660 ORTHO05D005474 4.3e-83 311.6 174 87.4
FAN10G4080 Fragaria x ananassa HOM05D004660 ORTHO05D005474 3.4e-80 302.0 146 97.3
FAN01G2536 Fragaria x ananassa HOM05D004660 ORTHO05D005474 4.5e-80 301.6 150 94.7
RcHm_v2.0_Chr1g0383281 Rosa chinensis HOM05D004660 ORTHO05D005474 2.1e-77 292.7 147 95.2
FAN03G0846 Fragaria x ananassa HOM05D004660 ORTHO05D005474 1.5e-75 286.6 140 96.4
Prupe.2G321900 Prunus persica HOM05D004660 ORTHO05D005474 8.5e-71 270.8 146 86.3
Cpa.g.sc3.184 Carica papaya HOM05D004660 ORTHO05D005474 3.0e-68 262.3 146 81.5
MD01G1231200 Malus domestica HOM05D004660 ORTHO05D005474 3.9e-68 261.9 153 79.7
Duzib205G1429 Durio zibethinus HOM05D004660 ORTHO05D005474 4.3e-67 258.5 148 79.7
Glyma.04G225900 Glycine max HOM05D004660 ORTHO05D005474 1.3e-66 256.9 147 81.0
Thecc.03G211800 Theobroma cacao HOM05D004660 ORTHO05D005474 1.6e-66 256.5 147 80.3
Lj1g0017846 Lotus japonicus HOM05D004660 ORTHO05D005474 3.7e-66 255.4 148 79.1
Haze_00331 Corylus avellana HOM05D004660 ORTHO05D005474 4.8e-66 255.0 147 79.6
CiPaw.06G038500 Carya illinoinensis HOM05D004660 ORTHO05D005474 6.3e-66 254.6 147 80.3
Glyma.06G138900 Glycine max HOM05D004660 ORTHO05D005474 1.1e-65 253.8 147 79.6
arahy.Tifrunner.gnm1.ann1.6FR5WN Arachis hypogaea HOM05D004660 ORTHO05D005474 1.4e-65 253.4 151 75.5
CiPaw.05G208600 Carya illinoinensis HOM05D004660 ORTHO05D005474 2.4e-65 252.7 146 78.1
VMungo0647G0407 Vigna mungo HOM05D004660 ORTHO05D005474 4.1e-65 251.9 146 76.7
Phvul.008G188100 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 5.3e-65 251.5 146 77.4
GSVIVG01038677001 Vitis vinifera HOM05D004660 ORTHO05D005474 5.3e-65 251.5 146 77.4
Hma1.2p1_0115F.1_g055760 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 6.9e-65 251.1 146 78.8
QL09p006015 Quercus lobata HOM05D004660 ORTHO05D005474 6.9e-65 251.1 146 80.8
ClCG07G009740 Citrullus lanatus HOM05D004660 ORTHO05D005474 9.1e-65 250.8 146 76.7
Gohir.D08G117700 Gossypium hirsutum HOM05D004660 ORTHO05D005474 1.5e-64 250.0 147 78.9
Gorai.004G126200 Gossypium raimondii HOM05D004660 ORTHO05D005474 1.5e-64 250.0 147 78.9
Glyma.14G188500 Glycine max HOM05D004660 ORTHO05D005474 3.4e-64 248.8 146 76.0
Atru.chr12.2504 Acer truncatum HOM05D004660 ORTHO05D005474 4.5e-64 248.4 146 77.4
Atru.chr12.2527 Acer truncatum HOM05D004660 ORTHO05D005474 4.5e-64 248.4 146 77.4
COL.COLO4_14397 Corchorus olitorius HOM05D004660 ORTHO05D005474 1.0e-63 247.3 140 80.0
CsaV3_4G009710 Cucumis sativus L. HOM05D004660 ORTHO05D005474 1.3e-63 246.9 146 75.3
VMungo1309G2317 Vigna mungo HOM05D004660 ORTHO05D005474 1.3e-63 246.9 148 77.7
Sed0024142 Sechium edule HOM05D004660 ORTHO05D005474 1.7e-63 246.5 146 74.7
Ca_16837_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 2.2e-63 246.1 144 77.1
Ciclev10022731m.g Citrus clementina HOM05D004660 ORTHO05D005474 2.2e-63 246.1 146 77.4
Glyma.02G221000 Glycine max HOM05D004660 ORTHO05D005474 2.2e-63 246.1 146 76.0
Gohir.A08G106300 Gossypium hirsutum HOM05D004660 ORTHO05D005474 2.2e-63 246.1 147 77.6
Sed0002848 Sechium edule HOM05D004660 ORTHO05D005474 2.2e-63 246.1 146 73.3
Solyc03g079970.1 Solanum lycopersicum HOM05D004660 ORTHO05D005474 2.2e-63 246.1 146 76.0
Sopen03g021700 Solanum pennellii HOM05D004660 ORTHO05D005474 2.2e-63 246.1 146 76.0
PGSC0003DMG400000574 Solanum tuberosum HOM05D004660 ORTHO05D005474 2.2e-63 246.1 146 76.0
Aqoxy5G04391 Aquilegia oxysepala HOM05D004660 ORTHO05D005474 2.9e-63 245.7 148 77.7
CSS0012455 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 2.9e-63 245.7 146 75.3
TPR.G35910 Trifolium pratense HOM05D004660 ORTHO05D005474 5.0e-63 245.0 146 77.4
MELO3C024844.2 Cucumis melo HOM05D004660 ORTHO05D005474 6.5e-63 244.6 146 74.7
Nitab4.5_0007121g0060 Nicotiana tabacum HOM05D004660 ORTHO05D005474 6.5e-63 244.6 146 75.3
LjContig00312_ERROPOS870357g0003416 Lotus japonicus HOM05D004660 ORTHO05D005474 8.5e-63 244.2 147 76.9
Nitab4.5_0000021g0160 Nicotiana tabacum HOM05D004660 ORTHO05D005474 8.5e-63 244.2 146 75.3
CANSAT21G0927 Cannabis sativa HOM05D004660 ORTHO05D005474 1.9e-62 243.0 150 78.0
Sc19g0000390 Simmondsia chinensis HOM05D004660 ORTHO05D005474 1.9e-62 243.0 146 76.7
CAN.G303.55 Capsicum annuum HOM05D004660 ORTHO05D005474 2.5e-62 242.7 146 76.0
Potri.015G000900 Populus trichocarpa HOM05D004660 ORTHO05D005474 2.5e-62 242.7 148 77.0
RcHm_v2.0_Chr4g0433201 Rosa chinensis HOM05D004660 ORTHO05D005474 2.5e-62 242.7 125 91.2
LjContig00155g0012911 Lotus japonicus HOM05D004660 ORTHO05D005474 3.2e-62 242.3 146 76.7
Phvul.009G040000 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 3.2e-62 242.3 148 77.0
vmacro10172 Vaccinium macrocarpon HOM05D004660 ORTHO05D005474 7.2e-62 241.1 147 74.8
TPR.G27918 Trifolium pratense HOM05D004660 ORTHO05D005474 9.4e-62 240.7 148 76.4
Migut.F00125 Erythranthe guttata HOM05D004660 ORTHO05D005474 1.2e-61 240.4 146 76.0
Lalb_Chr10g0102981 Lupinus albus HOM05D004660 ORTHO05D005474 1.2e-61 240.4 146 76.0
MSTRG.26954 Avicennia marina HOM05D004660 ORTHO05D005474 1.6e-61 240.0 146 73.3
Manes.05G195800 Manihot esculenta HOM05D004660 ORTHO05D005474 1.6e-61 240.0 146 72.6
Potri.012G004900 Populus trichocarpa HOM05D004660 ORTHO05D005474 1.6e-61 240.0 149 75.8
THA.LOC104814957 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 1.6e-61 240.0 147 74.8
DCAR_014568 Daucus carota HOM05D004660 ORTHO05D005474 2.1e-61 239.6 146 74.0
TWI39G0024 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 2.1e-61 239.6 146 75.3
Psat2g060520 Pisum sativum HOM05D004660 ORTHO05D005474 2.7e-61 239.2 147 76.2
Psat7g096840 Pisum sativum HOM05D004660 ORTHO05D005474 2.7e-61 239.2 147 76.2
TAR629G0239 Trochodendron aralioides HOM05D004660 ORTHO05D005474 2.7e-61 239.2 146 74.0
Rhsim09G0211000 Rhododendron simsii HOM05D004660 ORTHO05D005474 4.6e-61 238.4 147 73.5
MBI12_g37476_MAGBIO Magnolia biondii HOM05D004660 ORTHO05D005474 6.1e-61 238.0 144 74.3
TWI23G0412 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 1.0e-60 237.3 146 75.3
Lj1P1031T30 Lonicera japonica HOM05D004660 ORTHO05D005474 1.8e-60 236.5 150 74.0
EL10Ac3g05134 Beta vulgaris HOM05D004660 ORTHO05D005474 2.3e-60 236.1 146 71.2
DCAR_020388 Daucus carota HOM05D004660 ORTHO05D005474 2.3e-60 236.1 146 72.6
Oeu055424.1 Olea europaea HOM05D004660 ORTHO05D005474 3.0e-60 235.7 146 71.2
SGA_v2.0_scaffold44G16872 Striga asiatica HOM05D004660 ORTHO05D005474 3.0e-60 235.7 147 73.5
AUR62005951 Chenopodium quinoa HOM05D004660 ORTHO05D005474 5.1e-60 235.0 146 71.2
Thhalv10010801m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 5.1e-60 235.0 147 72.1
Gohir.A12G244500 Gossypium hirsutum HOM05D004660 ORTHO05D005474 5.1e-60 235.0 143 74.8
Gorai.008G263000 Gossypium raimondii HOM05D004660 ORTHO05D005474 5.1e-60 235.0 145 73.8
Hma1.2p1_0415F.1_g148340 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 1.1e-59 233.8 148 72.3
Psat5g071200 Pisum sativum HOM05D004660 ORTHO05D005474 1.1e-59 233.8 148 75.7
THA.LOC104803315 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 1.1e-59 233.8 147 72.1
Gohir.D12G245400 Gossypium hirsutum HOM05D004660 ORTHO05D005474 1.5e-59 233.4 145 73.8
Medtr5g068660 Medicago truncatula HOM05D004660 ORTHO05D005474 1.5e-59 233.4 148 75.7
AUR62028114 Chenopodium quinoa HOM05D004660 ORTHO05D005474 2.0e-59 233.0 146 70.5
Aa31LG11G3870 Aethionema arabicum HOM05D004660 ORTHO05D005474 2.6e-59 232.6 146 74.0
Ca_05550_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 3.3e-59 232.3 146 74.7
BraA06t25770Z Brassica rapa HOM05D004660 ORTHO05D005474 5.7e-59 231.5 146 70.5
CSS0035101 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 5.7e-59 231.5 146 71.9
Thhalv10005081m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 5.7e-59 231.5 149 72.5
arahy.Tifrunner.gnm1.ann1.N0NSHG Arachis hypogaea HOM05D004660 ORTHO05D005474 7.4e-59 231.1 133 79.7
BcaB02g09594 Brassica carinata HOM05D004660 ORTHO05D005474 9.7e-59 230.7 146 69.9
SGA_v2.0_scaffold18G08494 Striga asiatica HOM05D004660 ORTHO05D005474 9.7e-59 230.7 143 72.7
SalBow4G0874 Salvia bowleyana HOM05D004660 ORTHO05D005474 2.8e-58 229.2 146 71.2
Sp2g22770 Schrenkiella parvula HOM05D004660 ORTHO05D005474 2.8e-58 229.2 149 71.8
Carub.0006s2247 Capsella rubella HOM05D004660 ORTHO05D005474 3.7e-58 228.8 149 72.5
Ah.13g071030 Amaranthus hybridus HOM05D004660 ORTHO05D005474 6.3e-58 228.0 148 68.9
Peaxi162Scf01026g00258 Petunia axillaris HOM05D004660 ORTHO05D005474 1.1e-57 227.3 137 74.5
Migut.F00969 Erythranthe guttata HOM05D004660 ORTHO05D005474 1.4e-57 226.9 147 70.7
Sp5g12560 Schrenkiella parvula HOM05D004660 ORTHO05D005474 2.4e-57 226.1 146 68.5
HanXRQChr01g0002691 Helianthus annuus HOM05D004660 ORTHO05D005474 3.1e-57 225.7 152 69.7
Ah.13g069080 Amaranthus hybridus HOM05D004660 ORTHO05D005474 4.1e-57 225.3 148 67.6
A06p28270 Brassica napus HOM05D004660 ORTHO05D005474 6.9e-57 224.6 146 69.2
AL5G29390 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 9.1e-57 224.2 147 69.4
Oeu061046.1 Olea europaea HOM05D004660 ORTHO05D005474 1.5e-56 223.4 146 67.8
BcaNung01246 Brassica carinata HOM05D004660 ORTHO05D005474 2.0e-56 223.0 150 72.7
Manes.01G050300 Manihot esculenta HOM05D004660 ORTHO05D005474 2.0e-56 223.0 125 78.4
AL6G36220 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 3.4e-56 222.2 148 72.3
CARHR188840 Cardamine hirsuta HOM05D004660 ORTHO05D005474 1.3e-55 220.3 150 69.3
AT5G24610 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 2.9e-55 219.2 147 72.8
Lj3P891T43 Lonicera japonica HOM05D004660 ORTHO05D005474 2.9e-55 219.2 146 69.2
ATR0579G143 Amborella trichopoda HOM05D004660 ORTHO05D005474 1.1e-54 217.2 147 69.4
BcaC03g17953 Brassica carinata HOM05D004660 ORTHO05D005474 2.5e-54 216.1 150 71.3
A06p35410 Brassica napus HOM05D004660 ORTHO05D005474 2.5e-54 216.1 150 70.7
C02p60130 Brassica napus HOM05D004660 ORTHO05D005474 2.5e-54 216.1 150 71.3
BolC2t12069H Brassica oleracea HOM05D004660 ORTHO05D005474 2.5e-54 216.1 150 71.3
BraA06t26464Z Brassica rapa HOM05D004660 ORTHO05D005474 2.5e-54 216.1 150 70.7
unitig_92.g28236 Utricularia gibba HOM05D004660 ORTHO05D005474 2.5e-54 216.1 149 65.8
A02p40180 Brassica napus HOM05D004660 ORTHO05D005474 3.2e-54 215.7 150 71.3
THA.LOC104799676 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 3.2e-54 215.7 147 66.0
BraA02t08983Z Brassica rapa HOM05D004660 ORTHO05D005474 7.2e-54 214.5 150 70.7
AT3G49550 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 1.6e-53 213.4 150 70.0
BcaC09g49961 Brassica carinata HOM05D004660 ORTHO05D005474 2.1e-53 213.0 147 68.7
BolC1t03007H Brassica oleracea HOM05D004660 ORTHO05D005474 2.1e-53 213.0 147 68.7
BcaB07g29917 Brassica carinata HOM05D004660 ORTHO05D005474 4.7e-53 211.8 150 70.7
A01p24630 Brassica napus HOM05D004660 ORTHO05D005474 4.7e-53 211.8 147 68.0
BraA01t02375Z Brassica rapa HOM05D004660 ORTHO05D005474 4.7e-53 211.8 147 68.0
C03p65490 Brassica napus HOM05D004660 ORTHO05D005474 1.4e-52 210.3 131 68.7
Zm00001eb220600 Zea mays HOM05D004660 ORTHO05D005474 1.8e-52 209.9 146 67.8
BcaNung02008 Brassica carinata HOM05D004660 ORTHO05D005474 3.0e-52 209.1 148 70.3
C07p43100 Brassica napus HOM05D004660 ORTHO05D005474 3.0e-52 209.1 148 70.3
BolC7t44836H Brassica oleracea HOM05D004660 ORTHO05D005474 3.0e-52 209.1 148 70.3
CARHR158560 Cardamine hirsuta HOM05D004660 ORTHO05D005474 1.1e-51 207.2 151 64.9
Carub.0005s1588 Capsella rubella HOM05D004660 ORTHO05D005474 2.0e-51 206.5 139 66.9
unitig_37.g11998 Utricularia gibba HOM05D004660 ORTHO05D005474 2.6e-51 206.1 146 63.7
arahy.Tifrunner.gnm1.ann1.0Y4BRG Arachis hypogaea HOM05D004660 ORTHO05D005474 9.7e-51 204.1 134 72.4
Nn3g18745 Nelumbo nucifera HOM05D004660 ORTHO05D005474 2.8e-50 202.6 134 70.1
CSS0045456 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 4.8e-50 201.8 114 75.4
Os10g0509100 Oryza sativa ssp. japonica HOM05D004660 ORTHO05D005474 4.1e-49 198.7 146 67.1
Zm00001eb043850 Zea mays HOM05D004660 ORTHO05D005474 5.3e-49 198.4 147 66.7
Lsat_1_v5_gn_6_117240 Lactuca sativa HOM05D004660 ORTHO05D005474 1.7e-47 193.4 151 62.9
MD07G1303200 Malus domestica HOM05D004660 ORTHO05D005474 9.4e-46 187.6 101 87.1
Medtr3g093320 Medicago truncatula HOM05D004660 ORTHO05D005474 5.9e-40 168.3 146 62.3
BcaC01g02416 Brassica carinata HOM05D004660 ORTHO05D005474 1.9e-38 163.3 101 70.3
Cc02_g00620 Coffea canephora HOM05D004660 ORTHO05D005474 1.9e-38 163.3 146 55.5
CSS0032658 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 4.7e-37 158.7 146 56.2
SalBow2G1279 Salvia bowleyana HOM05D004660 ORTHO05D005474 3.4e-35 152.5 97 73.2
SEGI_20417 Sequoiadendron giganteum HOM05D004660 ORTHO05D005474 5.7e-35 151.8 148 52.7
Mapoly0204s0014 Marchantia polymorpha HOM05D004660 ORTHO05D005474 1.0e-31 141.0 117 58.1
SMO351G0342 Selaginella moellendorffii HOM05D004660 ORTHO05D005474 6.3e-26 121.7 166 41.6
Aa31LG4G18040 Aethionema arabicum HOM05D004660 ORTHO05D005474 2.3e-23 113.2 134 46.3
Actinidia08719 Actinidia chinensis HOM05D004660 ORTHO05D005474 1.2e-19 100.9 67 67.2
AagrBONN_evm.TU.Sc2ySwM_117.1216 Anthoceros agrestis HOM05D004660 ORTHO05D005474 1.5e-19 100.5 105 48.6
DCAR_001793 Daucus carota HOM05D000001 ORTHO05D000003 5.7e-19 98.6 75 61.3
Cre07.g345800 Chlamydomonas reinhardtii HOM05D004660 ORTHO05D005474 2.6e-11 73.2 91 38.5
arahy.Tifrunner.gnm1.ann1.RHW5C7 Arachis hypogaea HOM05D017329 ORTHO05D005474 1.2e-08 64.3 41 68.3
PRCOL_00007052 Prasinoderma coloniale HOM05D004660 ORTHO05D005474 5.6e-06 55.5 66 40.9


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