Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_7g27710 Fragaria vesca HOM05D007222 ORTHO05D010132 9.8e-247 856.3 413 100.0
FAN03G1025 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.3e-234 813.5 413 94.9
FvH4_7g27660 Fragaria vesca HOM05D007222 ORTHO05D010132 1.2e-231 806.2 413 94.2
FAN06G5048 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.1e-213 744.6 411 88.3
FAN06G0677 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.1e-209 730.3 413 86.2
FAN01G2879 Fragaria x ananassa HOM05D000202 ORTHO05D010132 2.0e-199 699.1 400 84.5
FAN06G0811 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.8e-199 697.6 399 85.2
FvH4_7g13450 Fragaria vesca HOM05D007222 ORTHO05D010132 2.9e-198 695.3 413 83.1
FAN06G2032 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-196 689.1 413 82.8
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.9e-187 658.3 433 77.6
FAN03G0896 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.4e-176 622.5 381 81.4
FvH4_7g27670 Fragaria vesca HOM05D007222 ORTHO05D010132 1.3e-174 616.7 419 73.7
FAN06G1439 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.2e-174 615.9 419 73.5
FAN06G2815 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.9e-173 612.8 419 73.5
FvH4_7g27720 Fragaria vesca HOM05D007222 ORTHO05D010132 2.3e-171 605.9 409 75.3
FAN06G4891 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.1e-152 540.8 277 93.9
FAN06G2272 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.5e-130 468.0 379 63.9
FAN10G0676 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.2e-129 466.5 383 63.2
FvH4_7g27631 Fragaria vesca HOM05D007222 ORTHO05D010132 6.3e-129 464.9 383 62.9
FAN06G2615 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.5e-127 458.8 372 63.7
FvH4_7g27640 Fragaria vesca HOM05D007222 ORTHO05D010132 6.6e-94 348.6 177 96.0
FAN01G0578 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.7e-92 342.4 362 54.4
FAN10G3128 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.5e-87 326.2 386 49.7
RcHm_v2.0_Chr1g0379111 Rosa chinensis HOM05D007222 ORTHO05D010132 2.4e-83 313.5 432 42.6
RcHm_v2.0_Chr1g0379231 Rosa chinensis HOM05D007222 ORTHO05D010132 2.7e-79 300.1 393 44.5
RcHm_v2.0_Chr1g0379381 Rosa chinensis HOM05D007222 ORTHO05D010132 2.7e-79 300.1 393 44.5
RcHm_v2.0_Chr1g0378721 Rosa chinensis HOM05D007222 ORTHO05D010132 6.0e-79 298.9 393 44.5
RcHm_v2.0_Chr1g0379031 Rosa chinensis HOM05D007222 ORTHO05D010132 1.1e-77 294.7 371 45.3
FAN03G0246 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.9e-72 277.3 227 60.8
FAN06G1181 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.9e-63 245.4 254 53.1
FAN03G0079 Fragaria x ananassa HOM05D001548 ORTHO05D003901 3.0e-62 243.4 378 37.8
Prupe.5G179400 Prunus persica HOM05D007222 ORTHO05D010132 1.4e-59 234.6 369 40.1
FAN06G5098 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.7e-55 220.3 114 92.1
FAN06G3913 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.2e-52 210.7 369 42.0
Prupe.5G196700 Prunus persica HOM05D007222 ORTHO05D010132 2.8e-52 210.3 374 38.0
Prupe.5G196500 Prunus persica HOM05D007222 ORTHO05D010132 8.2e-52 208.8 373 38.1
FAN10G0066 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.1e-51 206.5 117 85.5
Prupe.8G014700 Prunus persica HOM05D007222 ORTHO05D010132 9.1e-51 205.3 371 37.7
Prupe.3G221000 Prunus persica HOM05D007222 ORTHO05D036617 9.4e-48 195.3 371 35.3
Prupe.3G220200 Prunus persica HOM05D007222 ORTHO05D036617 1.2e-47 194.9 373 35.4
Prupe.5G216900 Prunus persica HOM05D007222 ORTHO05D010132 2.1e-47 194.1 371 36.9
Prupe.5G196600 Prunus persica HOM05D007222 ORTHO05D010132 1.0e-46 191.8 396 36.1
FAN01G2703 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.4e-46 191.4 149 67.1
MD17G1269500 Malus domestica HOM05D007222 ORTHO05D036617 1.8e-46 191.0 387 37.2
MD06G1179400 Malus domestica HOM05D007222 ORTHO05D010132 6.7e-46 189.1 371 36.1
RcHm_v2.0_Chr7g0179991 Rosa chinensis HOM05D007222 ORTHO05D019190 7.4e-45 185.7 387 34.9
MD06G1179300 Malus domestica HOM05D007222 ORTHO05D010132 1.7e-44 184.5 388 34.5
Prupe.3G199700 Prunus persica HOM05D007222 ORTHO05D010132 8.2e-44 182.2 371 36.7
RcHm_v2.0_Chr7g0205711 Rosa chinensis HOM05D007222 ORTHO05D020701 2.4e-43 180.6 371 35.8
FvH4_5g16160 Fragaria vesca HOM05D007222 ORTHO05D019190 9.1e-43 178.7 405 34.1
FAN03G1782 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.1e-43 178.7 362 35.1
FAN06G2198 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.1e-43 178.7 251 42.6
FvH4_5g02900 Fragaria vesca HOM05D007222 ORTHO05D029649 2.0e-42 177.6 403 36.5
FAN18G1328 Fragaria x ananassa HOM05D007222 ORTHO05D029649 2.0e-42 177.6 403 36.5
FAN13G2764 Fragaria x ananassa HOM05D007222 ORTHO05D029649 3.4e-42 176.8 362 37.8
Prupe.2G232100 Prunus persica HOM05D007222 ORTHO05D010132 7.7e-42 175.6 370 34.9
FAN18G1099 Fragaria x ananassa HOM05D007222 ORTHO05D019190 1.3e-41 174.9 405 33.6
FAN06G3778 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.9e-41 173.7 171 57.3
Prupe.5G190500 Prunus persica HOM05D007222 ORTHO05D010132 8.5e-41 172.2 367 33.0
Prupe.I003600 Prunus persica HOM05D007222 ORTHO05D010132 1.9e-40 171.0 367 33.5
FAN06G1334 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.5e-40 169.5 171 56.7
Prupe.5G190300 Prunus persica HOM05D007222 ORTHO05D010132 5.5e-40 169.5 367 34.1
Prupe.3G199800 Prunus persica HOM05D007222 ORTHO05D010132 1.2e-39 168.3 371 34.2
Prupe.5G196800 Prunus persica HOM05D007222 ORTHO05D010132 2.1e-39 167.5 268 41.0
Prupe.5G190600 Prunus persica HOM05D007222 ORTHO05D010132 8.8e-38 162.2 367 31.9
FAN03G1041 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.2e-36 155.6 101 72.3
Prupe.5G196400 Prunus persica HOM05D007222 ORTHO05D010132 5.3e-35 152.9 305 36.4
Prupe.7G215500 Prunus persica HOM05D007222 ORTHO05D010132 9.1e-35 152.1 322 34.2
FAN01G0286 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.0e-34 151.0 347 33.4
FAN18G1465 Fragaria x ananassa HOM05D007222 ORTHO05D035251 1.7e-33 147.9 399 30.3
FAN06G0895 Fragaria x ananassa HOM05D007222 ORTHO05D046523 5.5e-32 142.9 156 54.5
FAN06G1627 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-31 141.0 83 73.5
FvH4_5g02920 Fragaria vesca HOM05D007222 ORTHO05D046396 2.3e-30 137.5 364 31.3
FAN18G3407 Fragaria x ananassa HOM05D007222 ORTHO05D046396 8.8e-30 135.6 412 29.6
MD06G1178900 Malus domestica HOM05D007222 ORTHO05D010132 1.7e-28 131.3 245 36.7
Prupe.7G215400 Prunus persica HOM05D007222 ORTHO05D010132 1.1e-27 128.6 309 33.7
FAN08G2897 Fragaria x ananassa HOM05D007222 ORTHO05D029649 5.3e-27 126.3 256 35.2
FAN08G3302 Fragaria x ananassa HOM05D007222 ORTHO05D020701 5.9e-26 122.9 373 31.1
RcHm_v2.0_Chr7g0219841 Rosa chinensis HOM05D007222 ORTHO05D020701 1.0e-25 122.1 366 30.6
RcHm_v2.0_Chr4g0388551 Rosa chinensis HOM05D007222 ORTHO05D010132 2.2e-25 120.9 370 26.5
FAN19G1742 Fragaria x ananassa HOM05D007222 ORTHO05D020701 4.2e-24 116.7 370 30.5
FvH4_5g15971 Fragaria vesca HOM05D007222 ORTHO05D035251 2.1e-23 114.4 352 29.3
FAN10G0917 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.7e-23 113.2 75 72.0
RcHm_v2.0_Chr7g0180241 Rosa chinensis HOM05D000007 ORTHO05D019190 9.8e-21 105.5 179 38.5
FvH4_1g11671 Fragaria vesca HOM05D013290 ORTHO05D016295 1.2e-18 98.6 325 30.5
FAN06G2293 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.2e-18 98.6 299 26.8
FAN26G0118 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.2e-18 98.6 329 30.1
FAN26G2054 Fragaria x ananassa HOM05D013290 ORTHO05D016295 4.5e-18 96.7 339 28.6
FvH4_5g15972 Fragaria vesca HOM05D007222 ORTHO05D035251 5.9e-18 96.3 176 33.0
FAN19G0139 Fragaria x ananassa HOM05D013290 ORTHO05D016295 5.9e-18 96.3 321 29.0
FAN26G0503 Fragaria x ananassa HOM05D013290 ORTHO05D016295 5.9e-18 96.3 280 30.4
RcHm_v2.0_Chr2g0100421 Rosa chinensis HOM05D013290 ORTHO05D016295 7.7e-18 95.9 299 29.8
FAN18G3680 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.3e-17 95.1 356 28.1
Prupe.5G190200 Prunus persica HOM05D007222 ORTHO05D010132 2.9e-17 94.0 124 42.7
Prupe.5G149900 Prunus persica HOM05D007222 ORTHO05D010132 3.2e-16 90.5 152 40.8
FAN03G0304 Fragaria x ananassa HOM05D000202 ORTHO05D000117 2.8e-15 87.4 94 47.9
MD06G1078700 Malus domestica HOM05D007222 ORTHO05D010132 3.6e-15 87.0 175 34.9
FAN19G1864 Fragaria x ananassa HOM05D013290 ORTHO05D016295 8.0e-15 85.9 273 29.7
MD14G1191500 Malus domestica HOM05D007222 ORTHO05D048640 1.3e-12 78.6 155 37.4
MD14G1191600 Malus domestica HOM05D007222 ORTHO05D048640 1.7e-12 78.2 164 36.6
FvH4_5g25390 Fragaria vesca HOM05D007222 ORTHO05D020701 2.8e-12 77.4 129 37.2
MD01G1106600 Malus domestica HOM05D007222 ORTHO05D010132 4.9e-12 76.6 123 37.4
Prupe.5G121900 Prunus persica HOM05D007222 ORTHO05D010132 5.4e-11 73.2 199 30.7
MD02G1032200 Malus domestica HOM05D007222 ORTHO05D010132 7.8e-10 69.3 102 38.2
FvH4_7g25981 Fragaria vesca HOM05D007222 ORTHO05D046523 1.7e-09 68.2 64 59.4
MD16G1080700 Malus domestica HOM05D007222 ORTHO05D010132 5.0e-09 66.6 126 34.9
FAN03G0076 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.6e-09 66.2 70 55.7
Prupe.5G150200 Prunus persica HOM05D007222 ORTHO05D010132 8.6e-09 65.9 120 35.0
FAN04G2817 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.5e-08 64.3 49 65.3
FAN08G3295 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.9e-06 55.8 78 38.5


User provided reference genes

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