Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_7g14880 Fragaria vesca HOM05D006343 ORTHO05D005694 2.1e-222 775.4 402 100.0
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.2e-218 761.5 400 98.8
FAN06G3127 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.7e-191 670.2 364 96.2
FAN10G3360 Fragaria x ananassa HOM05D006343 ORTHO05D005694 7.2e-178 627.5 364 90.7
FAN10G1634 Fragaria x ananassa HOM05D006343 ORTHO05D005694 8.8e-176 620.5 364 89.8
FAN03G0040 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.4e-96 356.7 226 84.1
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 4.6e-23 113.2 304 32.2
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 4.7e-20 103.2 224 33.9
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 4.7e-20 103.2 199 34.7
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.7e-20 103.2 198 33.8
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.1e-19 102.1 199 34.2
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 2.3e-19 100.9 287 33.1
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.3e-19 100.9 306 30.4
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.0e-19 100.1 288 33.7
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.2e-19 99.8 306 30.7
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 1.2e-18 98.6 201 34.8
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.4e-18 97.1 300 29.3
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.8e-18 96.3 294 31.6
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 1.3e-17 95.1 302 29.5
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 1.3e-17 95.1 169 35.5
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 2.2e-17 94.4 213 31.9
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.9e-17 93.2 297 31.6
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 6.4e-17 92.8 304 30.6
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 1.9e-16 91.3 309 29.8
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 5.4e-16 89.7 170 39.4
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 9.2e-16 89.0 219 32.4
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.7e-15 87.4 332 29.2
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 3.0e-14 84.0 284 27.5
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 3.9e-14 83.6 212 32.1
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 5.0e-14 83.2 149 34.2
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 1.5e-13 81.6 307 27.0
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 2.5e-13 80.9 170 32.4
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 3.3e-13 80.5 192 30.2
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 7.3e-13 79.3 305 28.5
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 9.5e-13 79.0 296 27.7
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 9.5e-13 79.0 297 27.9
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 3.6e-12 77.0 307 28.3
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 6.2e-12 76.3 213 29.1
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 1.8e-11 74.7 301 27.9
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 5.2e-11 73.2 207 30.4
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 6.8e-11 72.8 167 32.3
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 8.9e-11 72.4 140 36.4
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 2.0e-10 71.2 176 32.4
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 2.6e-10 70.9 211 29.4
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 4.4e-10 70.1 197 30.5
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 1.7e-09 68.2 202 31.2
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 2.2e-09 67.8 236 26.3
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 4.9e-09 66.6 176 29.5
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 6.4e-09 66.2 220 28.2
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 8.3e-09 65.9 207 29.5
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 1.9e-08 64.7 177 30.5
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 3.2e-08 63.9 172 30.2
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 7.1e-08 62.8 202 27.7
FAN03G2349 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.2e-08 62.4 42 69.0
FAN06G3406 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.2e-08 62.4 42 69.0
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 1.6e-07 61.6 147 31.3
HPP92_025480 Vanilla planifolia HOM05D049984 ORTHO05D020951 1.6e-07 61.6 140 30.0
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 2.1e-07 61.2 200 28.5
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 2.1e-07 61.2 119 32.8
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 2.7e-07 60.8 165 27.9
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 2.7e-07 60.8 202 24.3
CDE06G1281 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 6.0e-07 59.7 97 40.2
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 7.8e-07 59.3 144 29.2
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 1.0e-06 58.9 222 28.8
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 1.7e-06 58.2 169 31.4
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 2.3e-06 57.8 216 27.3
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 2.3e-06 57.8 194 29.4
HPP92_025479 Vanilla planifolia HOM05D049984 ORTHO05D020951 3.9e-06 57.0 143 30.1
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 5.1e-06 56.6 206 25.7
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 8.6e-06 55.8 132 32.6
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 8.6e-06 55.8 194 28.4


User provided reference genes

Program Settings