Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_7g06720 Fragaria vesca HOM05D000148 ORTHO05D029349 2.3e-69 265.4 130 100.0
FAN03G0117 Fragaria x ananassa HOM05D000148 ORTHO05D029349 7.5e-44 180.6 113 82.3
RcHm_v2.0_Chr1g0362371 Rosa chinensis HOM05D000148 ORTHO05D000081 4.3e-23 111.7 112 53.6
RcHm_v2.0_Chr1g0362381 Rosa chinensis HOM05D000148 ORTHO05D000081 7.3e-23 110.9 113 53.1
RcHm_v2.0_Chr1g0352471 Rosa chinensis HOM05D000148 ORTHO05D000081 9.9e-20 100.5 116 44.0
RcHm_v2.0_Chr7g0230501 Rosa chinensis HOM05D000148 ORTHO05D000081 1.3e-19 100.1 111 45.9
RcHm_v2.0_Chr6g0278361 Rosa chinensis HOM05D000148 ORTHO05D000081 2.9e-19 99.0 113 46.9
FAN01G1076 Fragaria x ananassa HOM05D000148 ORTHO05D015116 1.4e-18 96.7 51 86.3
RcHm_v2.0_Chr6g0277921 Rosa chinensis HOM05D000148 ORTHO05D000081 2.4e-18 95.9 114 45.6
Thecc.10G085900 Theobroma cacao HOM05D000148 ORTHO05D000081 2.1e-17 92.8 108 44.4
FAN06G0329 Fragaria x ananassa HOM05D000148 ORTHO05D000081 3.5e-17 92.0 113 38.1
Potri.008G033500 Populus trichocarpa HOM05D000148 ORTHO05D000081 4.6e-17 91.7 108 43.5
Potri.008G034300 Populus trichocarpa HOM05D000148 ORTHO05D000081 4.6e-17 91.7 108 43.5
FAN03G1764 Fragaria x ananassa HOM05D000148 ORTHO05D000081 2.3e-16 89.4 115 39.1
FAN28G0788 Fragaria x ananassa HOM05D000148 ORTHO05D000081 2.3e-16 89.4 115 39.1
FAN28G1532 Fragaria x ananassa HOM05D000148 ORTHO05D000081 2.3e-16 89.4 128 35.9
FAN01G2827 Fragaria x ananassa HOM05D000148 ORTHO05D000081 3.0e-16 89.0 128 36.7
FvH4_7g18570 Fragaria vesca HOM05D000148 ORTHO05D000081 5.1e-16 88.2 128 35.9
Sabra08G0022700 Salix brachista HOM05D000148 ORTHO05D000081 8.7e-16 87.4 105 41.0
FvH4_6g40060 Fragaria vesca HOM05D000148 ORTHO05D000081 1.1e-15 87.0 128 37.5
FAN06G3088 Fragaria x ananassa HOM05D000148 ORTHO05D000081 1.1e-15 87.0 127 36.2
Potri.008G034200 Populus trichocarpa HOM05D000148 ORTHO05D000081 1.1e-15 87.0 105 42.9
Sabra08G0022500 Salix brachista HOM05D000148 ORTHO05D000081 1.1e-15 87.0 105 41.0
FvH4_5g32840 Fragaria vesca HOM05D000148 ORTHO05D000081 1.9e-15 86.3 112 43.8
FAN18G4004 Fragaria x ananassa HOM05D000148 ORTHO05D000081 1.9e-15 86.3 112 43.8
CANSAT56G0125 Cannabis sativa HOM05D000148 ORTHO05D000081 4.3e-15 85.1 110 40.0
FvH4_7g18640 Fragaria vesca HOM05D000148 ORTHO05D000081 4.3e-15 85.1 128 35.9
FAN04G1350 Fragaria x ananassa HOM05D000148 ORTHO05D029349 4.3e-15 85.1 112 43.8
QL08p053931 Quercus lobata HOM05D000148 ORTHO05D000081 4.3e-15 85.1 106 42.5
RcHm_v2.0_Chr1g0362351 Rosa chinensis HOM05D000148 ORTHO05D000081 4.3e-15 85.1 114 36.8
RcHm_v2.0_Chr2g0101451 Rosa chinensis HOM05D000148 ORTHO05D000081 4.3e-15 85.1 116 41.4
RcHm_v2.0_Chr2g0101491 Rosa chinensis HOM05D000148 ORTHO05D000081 4.3e-15 85.1 118 41.5
RcHm_v2.0_Chr7g0230711 Rosa chinensis HOM05D000148 ORTHO05D000081 4.3e-15 85.1 113 42.5
Gohir.D04G005400 Gossypium hirsutum HOM05D000148 ORTHO05D000081 1.6e-14 83.2 116 41.4
Gorai.012G006700 Gossypium raimondii HOM05D000148 ORTHO05D000081 1.6e-14 83.2 116 41.4
QL08p053908 Quercus lobata HOM05D000148 ORTHO05D000081 1.6e-14 83.2 110 41.8
QL08p054074 Quercus lobata HOM05D000148 ORTHO05D000081 1.6e-14 83.2 106 39.6
QL08p054032 Quercus lobata HOM05D000148 ORTHO05D000081 2.8e-14 82.4 106 40.6
QL08p053981 Quercus lobata HOM05D000148 ORTHO05D000081 4.8e-14 81.6 106 41.5
FAN10G0163 Fragaria x ananassa HOM05D000148 ORTHO05D015116 6.2e-14 81.3 108 44.4
Sabra08G0022400 Salix brachista HOM05D000148 ORTHO05D000081 6.2e-14 81.3 106 39.6
Potri.008G034100 Populus trichocarpa HOM05D000148 ORTHO05D000081 1.1e-13 80.5 106 40.6
Manes.03G146200 Manihot esculenta HOM05D000148 ORTHO05D000081 1.4e-13 80.1 105 36.2
Manes.07G133108 Manihot esculenta HOM05D000148 ORTHO05D000081 1.8e-13 79.7 110 37.3
FAN06G2240 Fragaria x ananassa HOM05D000148 ORTHO05D000081 2.4e-13 79.3 111 36.9
Sabra08G0022300 Salix brachista HOM05D000148 ORTHO05D000081 2.4e-13 79.3 106 38.7
QL02p098243 Quercus lobata HOM05D000148 ORTHO05D000081 5.3e-13 78.2 112 41.1
SHI13901 Sapria himalayana HOM05D000148 ORTHO05D000081 5.3e-13 78.2 104 39.4
Manes.07G133104 Manihot esculenta HOM05D000148 ORTHO05D000081 6.9e-13 77.8 109 36.7
COL.COLO4_36540 Corchorus olitorius HOM05D000148 ORTHO05D000081 2.0e-12 76.3 108 38.9
Gohir.D04G005300 Gossypium hirsutum HOM05D000148 ORTHO05D000081 2.6e-12 75.9 116 40.5
Gorai.012G006600 Gossypium raimondii HOM05D000148 ORTHO05D000081 2.6e-12 75.9 116 40.5
Gohir.A05G409950 Gossypium hirsutum HOM05D000148 ORTHO05D000081 3.8e-11 72.0 110 39.1
Manes.10G050800 Manihot esculenta HOM05D000148 ORTHO05D000081 3.8e-11 72.0 105 34.3
QL08p054080 Quercus lobata HOM05D000148 ORTHO05D000081 3.8e-11 72.0 85 43.5
TWI38G1540 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 1.4e-10 70.1 112 38.4
FvH4_7g18630 Fragaria vesca HOM05D000148 ORTHO05D000081 5.4e-10 68.2 89 34.8
Gohir.D10G210200 Gossypium hirsutum HOM05D000148 ORTHO05D000081 2.1e-09 66.2 103 36.9
CANSAT56G3922 Cannabis sativa HOM05D000148 ORTHO05D000081 6.0e-09 64.7 118 33.1
Gorai.011G235600 Gossypium raimondii HOM05D000148 ORTHO05D000081 1.0e-08 63.9 112 33.9
TWI38G0542 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 1.0e-08 63.9 106 34.9
Gohir.A10G201900 Gossypium hirsutum HOM05D000148 ORTHO05D000081 1.3e-08 63.5 112 33.0
Sed0000224 Sechium edule HOM05D000148 ORTHO05D000081 1.7e-08 63.2 121 34.7
QL07p025173 Quercus lobata HOM05D000148 ORTHO05D000081 3.0e-08 62.4 116 31.9
QL10p026346 Quercus lobata HOM05D000148 ORTHO05D000081 3.0e-08 62.4 116 31.9
COL.COLO4_29398 Corchorus olitorius HOM05D000148 ORTHO05D000081 6.6e-08 61.2 103 34.0
Actinidia16172 Actinidia chinensis HOM05D000148 ORTHO05D000081 2.5e-07 59.3 113 29.2
CANSAT56G2693 Cannabis sativa HOM05D000148 ORTHO05D000081 2.5e-07 59.3 118 32.2
PGR044G0527 Punica granatum HOM05D000148 ORTHO05D000081 2.5e-07 59.3 109 32.1
Duzib106G1402 Durio zibethinus HOM05D000148 ORTHO05D000081 4.8e-06 55.1 103 29.1


User provided reference genes

Program Settings