Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_7g03740 Fragaria vesca HOM05D004975 ORTHO05D005963 2.4e-78 295.4 147 100.0
FAN06G0478 Fragaria x ananassa HOM05D004975 ORTHO05D005963 2.0e-77 292.4 146 98.6
FvH4_2g36661 Fragaria vesca HOM05D004975 ORTHO05D005963 3.7e-71 271.6 165 83.0
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 3.7e-71 271.6 165 83.0
RcHm_v2.0_Chr6g0305011 Rosa chinensis HOM05D004975 ORTHO05D005963 1.2e-69 266.5 135 95.6
Prupe.1G459900 Prunus persica HOM05D004975 ORTHO05D005963 8.8e-57 223.8 135 80.0
Manes.17G086700 Manihot esculenta HOM05D004975 ORTHO05D005963 1.7e-55 219.5 164 67.7
Hund22233 Selenicereus undatus HOM05D004975 ORTHO05D005963 2.2e-55 219.2 147 74.8
Hund06848 Selenicereus undatus HOM05D004975 ORTHO05D005963 3.7e-55 218.4 147 74.8
CSS0002597 Camellia sinensis var. sinensis HOM05D004975 ORTHO05D005963 8.2e-55 217.2 147 74.8
Ah.06g191340 Amaranthus hybridus HOM05D004975 ORTHO05D005963 1.1e-54 216.9 136 75.0
Sc24g0001980 Simmondsia chinensis HOM05D004975 ORTHO05D005963 1.1e-54 216.9 164 67.1
MD15G1107600 Malus domestica HOM05D004975 ORTHO05D005963 1.4e-54 216.5 136 77.9
GSVIVG01009932001 Vitis vinifera HOM05D004975 ORTHO05D005963 1.4e-54 216.5 160 69.4
Lalb_Chr18g0045061 Lupinus albus HOM05D004975 ORTHO05D005963 1.8e-54 216.1 135 76.3
Duzib187G1289 Durio zibethinus HOM05D004975 ORTHO05D005963 2.4e-54 215.7 135 77.8
TPR.G24523 Trifolium pratense HOM05D004975 ORTHO05D005963 2.4e-54 215.7 164 66.5
arahy.Tifrunner.gnm1.ann1.1NF0KF Arachis hypogaea HOM05D004975 ORTHO05D005963 3.1e-54 215.3 135 77.0
EL10Ac2g04836 Beta vulgaris HOM05D004975 ORTHO05D005963 3.1e-54 215.3 147 72.1
TAR383G0873 Trochodendron aralioides HOM05D004975 ORTHO05D005963 4.1e-54 214.9 147 73.5
TAR383G0773 Trochodendron aralioides HOM05D004975 ORTHO05D005963 5.3e-54 214.5 147 73.5
Phvul.011G072600 Phaseolus vulgaris HOM05D004975 ORTHO05D005963 6.9e-54 214.2 135 76.3
TAR625G0147 Trochodendron aralioides HOM05D004975 ORTHO05D005963 6.9e-54 214.2 147 73.5
VMungo1127G2243 Vigna mungo HOM05D004975 ORTHO05D005963 6.9e-54 214.2 135 76.3
EL10Ac4g08846 Beta vulgaris HOM05D004975 ORTHO05D005963 9.1e-54 213.8 136 74.3
CiPaw.01G062200 Carya illinoinensis HOM05D004975 ORTHO05D005963 9.1e-54 213.8 135 77.8
Ciclev10009422m.g Citrus clementina HOM05D004975 ORTHO05D005963 9.1e-54 213.8 147 70.7
Gohir.A07G060900 Gossypium hirsutum HOM05D004975 ORTHO05D005963 9.1e-54 213.8 135 77.0
Medtr1g007480 Medicago truncatula HOM05D004975 ORTHO05D005963 9.1e-54 213.8 164 64.6
PGR044G1665 Punica granatum HOM05D004975 ORTHO05D005963 9.1e-54 213.8 164 66.5
arahy.Tifrunner.gnm1.ann1.GL41SS Arachis hypogaea HOM05D004975 ORTHO05D005963 1.2e-53 213.4 135 76.3
ClCG10G000990 Citrullus lanatus HOM05D004975 ORTHO05D005963 1.2e-53 213.4 135 77.0
Cc08_g08560 Coffea canephora HOM05D004975 ORTHO05D005963 1.2e-53 213.4 135 75.6
Dinv30242 Davidia involucrata HOM05D004975 ORTHO05D005963 1.2e-53 213.4 135 77.0
MD08G1128100 Malus domestica HOM05D004975 ORTHO05D005963 1.2e-53 213.4 136 77.9
arahy.Tifrunner.gnm1.ann1.KS8K1P Arachis hypogaea HOM05D004975 ORTHO05D005963 1.5e-53 213.0 135 76.3
Gorai.001G069100 Gossypium raimondii HOM05D004975 ORTHO05D005963 1.5e-53 213.0 135 77.0
Lj3g0002799 Lotus japonicus HOM05D004975 ORTHO05D005963 1.5e-53 213.0 164 64.6
Lj3g0015990 Lotus japonicus HOM05D004975 ORTHO05D005963 1.5e-53 213.0 164 64.6
Aqoxy7G00181 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 2.0e-53 212.6 147 72.8
Migut.A00251 Erythranthe guttata HOM05D004975 ORTHO05D005963 2.0e-53 212.6 135 73.3
CiPaw.08G019900 Carya illinoinensis HOM05D004975 ORTHO05D005963 2.6e-53 212.2 135 77.0
Eucgr.H01931 Eucalyptus grandis HOM05D004975 ORTHO05D005963 2.6e-53 212.2 135 76.3
Gohir.D07G065600 Gossypium hirsutum HOM05D004975 ORTHO05D005963 2.6e-53 212.2 135 77.0
Glyma.12G071700 Glycine max HOM05D004975 ORTHO05D005963 3.4e-53 211.8 135 74.8
Actinidia13302 Actinidia chinensis HOM05D004975 ORTHO05D005963 4.5e-53 211.5 135 77.8
Actinidia13417 Actinidia chinensis HOM05D004975 ORTHO05D005963 4.5e-53 211.5 135 77.8
Cpa.g.sc6.221 Carica papaya HOM05D004975 ORTHO05D005963 4.5e-53 211.5 147 71.4
Psat6g036480 Pisum sativum HOM05D004975 ORTHO05D005963 4.5e-53 211.5 164 65.2
MELO3C013792.2 Cucumis melo HOM05D004975 ORTHO05D005963 5.9e-53 211.1 135 75.6
Duzib168G2230 Durio zibethinus HOM05D004975 ORTHO05D005963 5.9e-53 211.1 135 75.6
Glyma.11G153169 Glycine max HOM05D004975 ORTHO05D005963 5.9e-53 211.1 135 73.3
Hma1.2p1_0140F.1_g063690 Hydrangea macrophylla HOM05D004975 ORTHO05D005963 5.9e-53 211.1 135 75.6
Solyc08g065760.3 Solanum lycopersicum HOM05D004975 ORTHO05D005963 5.9e-53 211.1 135 75.6
Sopen08g019440 Solanum pennellii HOM05D004975 ORTHO05D005963 5.9e-53 211.1 135 75.6
Sopen10g033590 Solanum pennellii HOM05D004975 ORTHO05D005963 5.9e-53 211.1 135 75.6
Thecc.09G007400 Theobroma cacao HOM05D004975 ORTHO05D005963 5.9e-53 211.1 135 75.6
TWI34G1428 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 5.9e-53 211.1 164 65.9
Nitab4.5_0000250g0160 Nicotiana tabacum HOM05D004975 ORTHO05D005963 7.7e-53 210.7 135 74.8
Nitab4.5_0002393g0070 Nicotiana tabacum HOM05D004975 ORTHO05D005963 7.7e-53 210.7 135 74.8
CANSAT25G3538 Cannabis sativa HOM05D004975 ORTHO05D005963 1.0e-52 210.3 134 76.1
CsaV3_3G001030 Cucumis sativus L. HOM05D004975 ORTHO05D005963 1.3e-52 209.9 135 75.6
PGSC0003DMG400013829 Solanum tuberosum HOM05D004975 ORTHO05D005963 1.3e-52 209.9 135 74.8
Sed0019969 Sechium edule HOM05D004975 ORTHO05D005963 1.7e-52 209.5 135 73.3
Ca_12771_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 2.2e-52 209.1 164 63.4
CANSAT64G0033 Cannabis sativa HOM05D004975 ORTHO05D005963 3.8e-52 208.4 146 71.9
Peaxi162Scf00105g00510 Petunia axillaris HOM05D004975 ORTHO05D005963 3.8e-52 208.4 135 74.1
QL12p025158 Quercus lobata HOM05D004975 ORTHO05D005963 3.8e-52 208.4 135 73.3
MBI16_g41808_MAGBIO Magnolia biondii HOM05D004975 ORTHO05D005963 1.1e-51 206.8 135 73.3
TWI63G0658 Tripterygium wilfordii HOM05D004975 ORTHO05D005963 1.1e-51 206.8 164 64.6
Potri.018G006900 Populus trichocarpa HOM05D004975 ORTHO05D005963 1.4e-51 206.5 147 66.7
Atru.chr7.2646 Acer truncatum HOM05D004975 ORTHO05D005963 1.9e-51 206.1 147 70.1
THA.LOC104803875 Tarenaya hassleriana HOM05D004975 ORTHO05D005963 2.5e-51 205.7 164 62.2
DCAR_007697 Daucus carota HOM05D004975 ORTHO05D005963 3.2e-51 205.3 135 72.6
SGA_v2.0_scaffold229G43318 Striga asiatica HOM05D004975 ORTHO05D005963 4.2e-51 204.9 135 71.1
ECA248G0122 Erigeron canadensis HOM05D004975 ORTHO05D005963 5.5e-51 204.5 147 68.7
Lsat_1_v5_gn_1_49060 Lactuca sativa HOM05D004975 ORTHO05D005963 5.5e-51 204.5 147 68.7
SGA_v2.0_scaffold27G11528 Striga asiatica HOM05D004975 ORTHO05D005963 5.5e-51 204.5 135 71.1
COL.COLO4_19031 Corchorus olitorius HOM05D004975 ORTHO05D005963 7.2e-51 204.1 135 70.4
ECA248G2823 Erigeron canadensis HOM05D004975 ORTHO05D005963 7.2e-51 204.1 143 69.9
ATR0580G184 Amborella trichopoda HOM05D004975 ORTHO05D005963 1.6e-50 203.0 147 66.7
MSTRG.11721 Avicennia marina HOM05D004975 ORTHO05D005963 1.6e-50 203.0 135 70.4
AL7G20600 Arabidopsis lyrata HOM05D004975 ORTHO05D005963 2.1e-50 202.6 135 71.9
BraA08t33823Z Brassica rapa HOM05D004975 ORTHO05D005963 2.1e-50 202.6 134 72.4
HanXRQChr01g0029381 Helianthus annuus HOM05D004975 ORTHO05D005963 2.1e-50 202.6 135 71.1
A01p06810 Brassica napus HOM05D004975 ORTHO05D005963 2.7e-50 202.2 134 72.4
BraA01t00633Z Brassica rapa HOM05D004975 ORTHO05D005963 2.7e-50 202.2 134 72.4
BcaNung04586 Brassica carinata HOM05D004975 ORTHO05D005963 3.6e-50 201.8 132 73.5
A08p18600 Brassica napus HOM05D004975 ORTHO05D005963 3.6e-50 201.8 132 73.5
BcaB03g12697 Brassica carinata HOM05D004975 ORTHO05D005963 4.7e-50 201.4 134 71.6
C01p07550 Brassica napus HOM05D004975 ORTHO05D005963 4.7e-50 201.4 134 72.4
BolC1t00736H Brassica oleracea HOM05D004975 ORTHO05D005963 4.7e-50 201.4 134 72.4
HanXRQChr11g0341541 Helianthus annuus HOM05D004975 ORTHO05D005963 4.7e-50 201.4 135 70.4
Carub.0007s0909 Capsella rubella HOM05D004975 ORTHO05D005963 6.1e-50 201.1 134 71.6
Thhalv10026230m.g Eutrema salsugineum HOM05D004975 ORTHO05D005963 6.1e-50 201.1 134 71.6
Sp7g29320 Schrenkiella parvula HOM05D004975 ORTHO05D005963 6.1e-50 201.1 134 71.6
AT4G31460 Arabidopsis thaliana HOM05D004975 ORTHO05D005963 7.9e-50 200.7 135 71.1
CDE05G0021 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 7.9e-50 200.7 135 71.9
BcaC09g51928 Brassica carinata HOM05D004975 ORTHO05D005963 1.0e-49 200.3 134 71.6
Os07g0544900 Oryza sativa ssp. japonica HOM05D004975 ORTHO05D005963 1.0e-49 200.3 135 71.9
Rhsim04G0150100 Rhododendron simsii HOM05D004975 ORTHO05D005963 1.0e-49 200.3 121 79.3
CARHR239350 Cardamine hirsuta HOM05D004975 ORTHO05D005963 1.8e-49 199.5 135 69.6
unitig_46.g18530 Utricularia gibba HOM05D004975 ORTHO05D005963 2.3e-49 199.1 135 68.9
BcaC01g01087 Brassica carinata HOM05D004975 ORTHO05D005963 3.9e-49 198.4 134 70.9
C03p87960 Brassica napus HOM05D004975 ORTHO05D005963 3.9e-49 198.4 134 70.9
BolC3t21107H Brassica oleracea HOM05D004975 ORTHO05D005963 3.9e-49 198.4 134 70.9
Zm00001eb323470 Zea mays HOM05D004975 ORTHO05D005963 6.7e-49 197.6 134 70.1
CDE02G4585 Ceratophyllum demersum HOM05D004975 ORTHO05D005963 8.8e-49 197.2 135 69.6
Aa31LG2G18860 Aethionema arabicum HOM05D004975 ORTHO05D005963 5.7e-48 194.5 135 69.6
arahy.Tifrunner.gnm1.ann1.57HDZK Arachis hypogaea HOM05D004975 ORTHO05D005963 1.8e-46 189.5 135 71.1
HPP92_011116 Vanilla planifolia HOM05D004975 ORTHO05D005963 1.8e-46 189.5 136 65.4
SHI04272 Sapria himalayana HOM05D004975 ORTHO05D005963 2.4e-46 189.1 156 60.9
Zm00001eb106440 Zea mays HOM05D004975 ORTHO05D005963 9.1e-46 187.2 134 66.4
PSO063G2087 Papaver somniferum HOM05D004975 ORTHO05D005963 2.2e-44 182.6 150 60.7
PSO170G1562 Papaver somniferum HOM05D004975 ORTHO05D005963 2.2e-44 182.6 150 60.7
PSO063G4606 Papaver somniferum HOM05D004975 ORTHO05D005963 1.9e-43 179.5 129 66.7
SEGI_29047 Sequoiadendron giganteum HOM05D004975 ORTHO05D005963 4.2e-43 178.3 132 64.4
PSO782G1312 Papaver somniferum HOM05D004975 ORTHO05D005963 8.0e-42 174.1 102 76.5
Sabra18G0014600 Salix brachista HOM05D004975 ORTHO05D005963 9.7e-40 167.2 233 41.2
Lj7C709T7 Lonicera japonica HOM05D004975 ORTHO05D005963 6.3e-39 164.5 110 71.8
AUR62027460 Chenopodium quinoa HOM05D004975 ORTHO05D005963 1.8e-38 162.9 106 73.6
Nn2g12690 Nelumbo nucifera HOM05D004975 ORTHO05D005963 2.4e-38 162.5 106 75.5
CAN.G886.9 Capsicum annuum HOM05D004975 ORTHO05D005963 4.1e-38 161.8 107 72.0
Haze_21744 Corylus avellana HOM05D004975 ORTHO05D005963 1.2e-37 160.2 250 41.2
Ca_29761_v3 Cicer arietinum L. HOM05D004975 ORTHO05D005963 2.6e-37 159.1 106 71.7
Cfa013273 Carpinus fangiana HOM05D004975 ORTHO05D005963 8.5e-36 154.1 110 69.1
Manes.15G137600 Manihot esculenta HOM05D004975 ORTHO05D005963 8.5e-36 154.1 117 65.0
Oeu031567.1 Olea europaea HOM05D004975 ORTHO05D005963 1.9e-35 152.9 104 67.3
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 9.4e-35 150.6 95 74.7
Solyc10g038060.2 Solanum lycopersicum HOM05D004975 ORTHO05D005963 1.6e-34 149.8 85 82.4
HPP92_011121 Vanilla planifolia HOM05D004975 ORTHO05D005963 3.6e-34 148.7 107 68.2
Pp3c2_35700 Physcomitrium patens HOM05D004975 ORTHO05D005963 1.5e-32 143.3 102 61.8
SMO367G1088 Selaginella moellendorffii HOM05D004975 ORTHO05D005963 1.5e-32 143.3 98 66.3
AagrBONN_evm.TU.Sc2ySwM_117.1642 Anthoceros agrestis HOM05D004975 ORTHO05D005963 2.0e-32 142.9 138 50.7
Mapoly0026s0002 Marchantia polymorpha HOM05D004975 ORTHO05D005963 9.7e-32 140.6 100 62.0
BcaNung01521 Brassica carinata HOM05D004975 ORTHO05D005963 1.4e-25 120.2 77 72.7
BcaNung04139 Brassica carinata HOM05D004975 ORTHO05D005963 1.4e-25 120.2 77 72.7
BcaC01g01097 Brassica carinata HOM05D004975 ORTHO05D005963 1.2e-21 107.1 63 77.8
C03p88060 Brassica napus HOM05D004975 ORTHO05D005963 2.0e-21 106.3 61 78.7
Aqoxy3G03669 Aquilegia oxysepala HOM05D004975 ORTHO05D005963 2.8e-18 95.9 63 71.4
PRCOL_00000323 Prasinoderma coloniale HOM05D004975 ORTHO05D005963 8.9e-17 90.9 90 47.8
BcaB03g12699 Brassica carinata HOM05D004975 ORTHO05D005963 2.8e-15 85.9 91 52.7
Cfa025056 Carpinus fangiana HOM05D004975 ORTHO05D005963 2.0e-13 79.7 78 48.7
CBR_g8145 Chara braunii HOM05D004975 ORTHO05D005963 2.5e-11 72.8 62 54.8
CiPaw.07G212300 Carya illinoinensis HOM05D004975 ORTHO05D005963 4.0e-09 65.5 48 64.6
AagrBONN_evm.TU.Sc2ySwM_368.1480 Anthoceros agrestis HOM05D001654 ORTHO05D002773 5.2e-09 65.1 46 58.7
Oeu033208.1 Olea europaea HOM05D004975 ORTHO05D005963 7.5e-08 61.2 53 54.7
AUR62027459 Chenopodium quinoa HOM05D004975 ORTHO05D005963 6.4e-07 58.2 42 69.0


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