Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_7g02510 Fragaria vesca HOM05D008163 ORTHO05D010305 2.8e-64 248.4 126 100.0
FAN06G4466 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.9e-60 235.7 125 93.6
RcHm_v2.0_Chr1g0321141 Rosa chinensis HOM05D008163 ORTHO05D010305 3.3e-60 235.0 126 93.7
FAN03G0237 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.0e-58 229.9 118 96.6
RcHm_v2.0_Chr2g0149911 Rosa chinensis HOM05D008163 ORTHO05D010305 4.9e-56 221.1 126 87.3
Prupe.4G282300 Prunus persica HOM05D008163 ORTHO05D010305 1.5e-33 146.4 108 71.3
Prupe.7G030100 Prunus persica HOM05D008163 ORTHO05D010305 7.6e-33 144.1 108 69.4
Potri.007G072900 Populus trichocarpa HOM05D008163 ORTHO05D010305 9.9e-33 143.7 110 66.4
SHI03043 Sapria himalayana HOM05D008163 ORTHO05D010305 1.3e-32 143.3 104 66.3
MD12G1044600 Malus domestica HOM05D008163 ORTHO05D010305 2.2e-32 142.5 111 67.6
MD15G1374400 Malus domestica HOM05D008163 ORTHO05D010305 2.2e-32 142.5 111 67.6
Sabra07G0061500 Salix brachista HOM05D008163 ORTHO05D010305 2.2e-32 142.5 110 67.3
Sabra15G0022500 Salix brachista HOM05D008163 ORTHO05D010305 3.7e-32 141.7 110 66.4
Hma1.2p1_0136F.1_g062003 Hydrangea macrophylla HOM05D008163 ORTHO05D010305 3.5e-30 135.2 112 62.5
Carub.0003s2247 Capsella rubella HOM05D008163 ORTHO05D010305 2.3e-29 132.5 102 66.7
SalBow1G5351 Salvia bowleyana HOM05D008163 ORTHO05D010305 1.1e-28 130.2 105 64.8
SalBow1G7817 Salvia bowleyana HOM05D008163 ORTHO05D010305 1.1e-28 130.2 105 64.8
Thhalv10021368m.g Eutrema salsugineum HOM05D008163 ORTHO05D010305 3.3e-28 128.6 98 68.4
Aa31LG8G8870 Aethionema arabicum HOM05D008163 ORTHO05D010305 1.6e-27 126.3 98 64.3
AL3G36570 Arabidopsis lyrata HOM05D008163 ORTHO05D010305 1.6e-27 126.3 112 59.8
CARHR098200 Cardamine hirsuta HOM05D008163 ORTHO05D010305 1.6e-27 126.3 107 61.7
Sp3g20090 Schrenkiella parvula HOM05D008163 ORTHO05D010305 1.6e-27 126.3 110 60.9
BcaB06g26334 Brassica carinata HOM05D008163 ORTHO05D010305 2.1e-27 125.9 110 60.9
A05p26470 Brassica napus HOM05D008163 ORTHO05D010305 3.6e-27 125.2 107 61.7
BraA03t13418Z Brassica rapa HOM05D008163 ORTHO05D010305 3.6e-27 125.2 110 60.9
BraA05t21520Z Brassica rapa HOM05D008163 ORTHO05D010305 3.6e-27 125.2 107 61.7
AT3G22300 Arabidopsis thaliana HOM05D008163 ORTHO05D010305 4.7e-27 124.8 110 60.0
A03p42710 Brassica napus HOM05D008163 ORTHO05D010305 8.1e-27 124.0 110 60.0
FAN10G0940 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.1e-26 123.6 66 95.5
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 1.4e-26 123.2 108 58.3
BcaC05g28083 Brassica carinata HOM05D008163 ORTHO05D010305 2.4e-26 122.5 98 65.3
C05p41060 Brassica napus HOM05D008163 ORTHO05D010305 2.4e-26 122.5 98 65.3
BolC5t32848H Brassica oleracea HOM05D008163 ORTHO05D010305 2.4e-26 122.5 98 65.3
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 2.4e-26 122.5 107 57.9
BcaC01g03452 Brassica carinata HOM05D008163 ORTHO05D010305 3.1e-26 122.1 98 64.3
C03p52430 Brassica napus HOM05D008163 ORTHO05D010305 3.1e-26 122.1 98 64.3
BolC3t17513H Brassica oleracea HOM05D008163 ORTHO05D010305 3.1e-26 122.1 98 64.3
Solyc11g063600.3 Solanum lycopersicum HOM05D008163 ORTHO05D010305 3.4e-25 118.6 112 58.9
Manes.09G036100 Manihot esculenta HOM05D008163 ORTHO05D010305 1.7e-24 116.3 81 69.1
Actinidia29350 Actinidia chinensis HOM05D008163 ORTHO05D010305 2.2e-24 115.9 90 63.3
DCAR_027582 Daucus carota HOM05D008163 ORTHO05D010305 2.4e-23 112.5 118 50.0
Rhsim06G0223600 Rhododendron simsii HOM05D000504 ORTHO05D000403 1.6e-22 109.8 77 67.5
Os12g0517200 Oryza sativa ssp. japonica HOM05D008163 ORTHO05D010305 3.5e-22 108.6 109 54.1
CSS0033547 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 4.6e-22 108.2 90 62.2
CSS0047821 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 4.6e-22 108.2 90 62.2
Prupe.7G029400 Prunus persica HOM05D008163 ORTHO05D010305 7.8e-22 107.5 74 73.0
Zm00001eb215210 Zea mays HOM05D008163 ORTHO05D010305 1.0e-21 107.1 106 52.8
Hund21444 Selenicereus undatus HOM05D008163 ORTHO05D010305 3.0e-21 105.5 98 55.1
SEGI_07019 Sequoiadendron giganteum HOM05D008163 ORTHO05D010305 3.0e-21 105.5 100 55.0
Zm00001eb056700 Zea mays HOM05D008163 ORTHO05D010305 1.1e-20 103.6 106 51.9
PSO017G7110 Papaver somniferum HOM05D008163 ORTHO05D010305 9.6e-20 100.5 84 58.3
PSO170G4613 Papaver somniferum HOM05D008163 ORTHO05D010305 9.6e-20 100.5 84 58.3
Nn1g09991 Nelumbo nucifera HOM05D008163 ORTHO05D010305 8.1e-19 97.4 83 61.4
Nn1g10091 Nelumbo nucifera HOM05D008163 ORTHO05D010305 8.1e-19 97.4 83 61.4
TPR.G20554 Trifolium pratense HOM05D008163 ORTHO05D010305 1.1e-18 97.1 85 61.2
AUR62012772 Chenopodium quinoa HOM05D008163 ORTHO05D010305 1.4e-18 96.7 98 53.1
AUR62021886 Chenopodium quinoa HOM05D008163 ORTHO05D010305 1.8e-18 96.3 98 52.0
Lalb_Chr00c21g0405831 Lupinus albus HOM05D008163 ORTHO05D010305 1.8e-18 96.3 84 60.7
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 2.4e-18 95.9 87 56.3
Ah.14g087810 Amaranthus hybridus HOM05D000967 ORTHO05D000796 9.0e-18 94.0 99 50.5
EL10Ac8g20156 Beta vulgaris HOM05D008163 ORTHO05D010305 9.0e-18 94.0 90 53.3
AUR62036216 Chenopodium quinoa HOM05D008163 ORTHO05D010305 2.6e-17 92.4 100 53.0
Pp3c3_3090 Physcomitrium patens HOM05D008163 ORTHO05D010305 7.6e-17 90.9 108 42.6
Nitab4.5_0001127g0310 Nicotiana tabacum HOM05D008163 ORTHO05D010305 2.2e-16 89.4 87 55.2
Nitab4.5_0000592g0150 Nicotiana tabacum HOM05D008163 ORTHO05D010305 3.2e-15 85.5 80 57.5
Nitab4.5_0000172g1360 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.0e-13 80.5 78 53.8
AagrBONN_evm.TU.Sc2ySwM_368.972 Anthoceros agrestis HOM05D008163 ORTHO05D010305 1.3e-13 80.1 100 43.0
MD07G1062900 Malus domestica HOM05D008163 ORTHO05D010305 6.6e-13 77.8 74 54.1
SMO234G0032 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 4.0e-10 68.6 96 41.7
Glyma.17G185500 Glycine max HOM05D008163 ORTHO05D010305 1.5e-09 66.6 69 52.2
SMO196G0141 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 2.0e-09 66.2 69 46.4
Nitab4.5_0001702g0010 Nicotiana tabacum HOM05D011509 ORTHO05D010305 8.4e-08 60.8 53 58.5


User provided reference genes

Program Settings