Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_7g02110 Fragaria vesca HOM05D017106 ORTHO05D013324 5.5e-116 421.0 216 100.0
FAN10G1683 Fragaria x ananassa HOM05D017106 ORTHO05D013324 3.0e-106 388.7 218 94.5
FAN06G2366 Fragaria x ananassa HOM05D017106 ORTHO05D013324 3.5e-102 375.2 216 91.7
FAN03G1366 Fragaria x ananassa HOM05D017106 ORTHO05D013324 1.1e-100 370.2 222 90.5
FvH4_7g01990 Fragaria vesca HOM05D017106 ORTHO05D013324 1.1e-60 237.3 222 63.1
FAN10G3260 Fragaria x ananassa HOM05D017106 ORTHO05D013324 8.4e-32 141.4 214 45.8
FAN01G2258 Fragaria x ananassa HOM05D017106 ORTHO05D013324 3.0e-29 132.9 160 54.4
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.2e-22 110.9 136 53.7
FvH4_7g04141 Fragaria vesca HOM05D017106 ORTHO05D013324 2.1e-14 83.6 203 39.4
MD15G1430800 Malus domestica HOM05D000307 ORTHO05D013324 5.7e-12 75.5 210 30.0
FvH4_5g27070 Fragaria vesca HOM05D016120 ORTHO05D013324 6.3e-11 72.0 94 41.5
FAN08G0332 Fragaria x ananassa HOM05D016120 ORTHO05D013324 6.3e-11 72.0 94 41.5
MD17G1250500 Malus domestica HOM05D000307 ORTHO05D000166 6.3e-11 72.0 78 43.6
FAN18G0925 Fragaria x ananassa HOM05D016120 ORTHO05D013324 1.1e-10 71.2 207 33.3
Prupe.7G032000 Prunus persica HOM05D000307 ORTHO05D000166 1.4e-10 70.9 96 39.6
FAN04G1442 Fragaria x ananassa HOM05D016120 ORTHO05D013324 1.8e-10 70.5 105 39.0
FAN13G0405 Fragaria x ananassa HOM05D016120 ORTHO05D013324 1.8e-10 70.5 94 40.4
Prupe.7G030800 Prunus persica HOM05D000307 ORTHO05D000166 9.0e-10 68.2 210 27.6
FvH4_4g07700 Fragaria vesca HOM05D016120 ORTHO05D013324 1.5e-09 67.4 105 42.9
FAN22G2097 Fragaria x ananassa HOM05D016120 ORTHO05D013324 2.6e-09 66.6 94 41.5
MD02G1297800 Malus domestica HOM05D000307 ORTHO05D000166 4.5e-09 65.9 84 38.1
FAN12G1561 Fragaria x ananassa HOM05D016120 ORTHO05D013324 5.9e-09 65.5 105 41.9
Prupe.7G031800 Prunus persica HOM05D000307 ORTHO05D000166 7.6e-09 65.1 214 29.4
FvH4_2g27520 Fragaria vesca HOM05D000307 ORTHO05D000166 2.2e-08 63.5 73 41.1
FAN15G0593 Fragaria x ananassa HOM05D000307 ORTHO05D000166 2.2e-08 63.5 73 41.1
FAN24G2406 Fragaria x ananassa HOM05D000307 ORTHO05D000166 2.2e-08 63.5 73 41.1
FAN27G3405 Fragaria x ananassa HOM05D000307 ORTHO05D000166 2.9e-08 63.2 73 41.1
Potri.002G255700 Populus trichocarpa HOM05D000307 ORTHO05D000166 2.9e-08 63.2 72 43.1
Potri.012G109900 Populus trichocarpa HOM05D000307 ORTHO05D000166 3.8e-08 62.8 72 43.1
RcHm_v2.0_Chr6g0296351 Rosa chinensis HOM05D000307 ORTHO05D000166 3.8e-08 62.8 73 41.1
COL.COLO4_22397 Corchorus olitorius HOM05D000307 ORTHO05D000166 1.1e-07 61.2 75 38.7
Eucgr.H02504 Eucalyptus grandis HOM05D000307 ORTHO05D000166 1.1e-07 61.2 73 42.5
FAN20G0315 Fragaria x ananassa HOM05D000307 ORTHO05D000166 1.1e-07 61.2 73 39.7
Sabra02G0194300 Salix brachista HOM05D028904 ORTHO05D000166 1.1e-07 61.2 72 41.7
Prupe.3G148900 Prunus persica HOM05D000307 ORTHO05D000166 2.5e-07 60.1 73 39.7
Eucgr.K02593 Eucalyptus grandis HOM05D000307 ORTHO05D000166 3.2e-07 59.7 74 36.5
Psat6g001960 Pisum sativum HOM05D000307 ORTHO05D000166 3.2e-07 59.7 73 42.5
Potri.001G214900 Populus trichocarpa HOM05D000307 ORTHO05D000166 3.2e-07 59.7 76 40.8
Psat1g082000 Pisum sativum HOM05D000307 ORTHO05D000166 4.2e-07 59.3 73 41.1
Glyma.08G095300 Glycine max HOM05D008089 ORTHO05D000166 7.2e-07 58.5 81 40.7
Prupe.2G110900 Prunus persica HOM05D000307 ORTHO05D000166 9.3e-07 58.2 83 34.9
PGR042G3771 Punica granatum HOM05D000307 ORTHO05D000166 9.3e-07 58.2 71 38.0
Eucgr.J02241 Eucalyptus grandis HOM05D000307 ORTHO05D000166 1.2e-06 57.8 76 34.2
Prupe.7G030200 Prunus persica HOM05D000307 ORTHO05D000166 1.6e-06 57.4 153 30.7
VMungo0647G1946 Vigna mungo HOM05D008089 ORTHO05D000166 1.6e-06 57.4 71 40.8
Cpa.g.sc0.43 Carica papaya HOM05D000307 ORTHO05D000166 2.1e-06 57.0 84 40.5
Eucgr.F02794 Eucalyptus grandis HOM05D000307 ORTHO05D000166 2.1e-06 57.0 76 38.2
Eucgr.H02508 Eucalyptus grandis HOM05D000307 ORTHO05D000166 2.1e-06 57.0 72 41.7
arahy.Tifrunner.gnm1.ann1.P24S13 Arachis hypogaea HOM05D000307 ORTHO05D000166 2.7e-06 56.6 77 35.1
Ca_13731_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 2.7e-06 56.6 73 41.1
Nn4g24661 Nelumbo nucifera HOM05D000307 ORTHO05D000166 2.7e-06 56.6 73 35.6
PGR042G2078 Punica granatum HOM05D000307 ORTHO05D000166 2.7e-06 56.6 71 39.4
Eucgr.H02505 Eucalyptus grandis HOM05D000307 ORTHO05D000166 3.6e-06 56.2 72 40.3
Lalb_Chr23g0265491 Lupinus albus HOM05D000307 ORTHO05D000166 3.6e-06 56.2 71 43.7
Medtr6g005440 Medicago truncatula HOM05D008089 ORTHO05D000166 3.6e-06 56.2 72 38.9
SHI00087 Sapria himalayana HOM05D000307 ORTHO05D000166 3.6e-06 56.2 78 38.5
Eucgr.J02348 Eucalyptus grandis HOM05D000307 ORTHO05D000166 4.6e-06 55.8 167 24.6
Gohir.D03G048600 Gossypium hirsutum HOM05D000307 ORTHO05D000166 4.6e-06 55.8 59 42.4
PGR042G1162 Punica granatum HOM05D000307 ORTHO05D000166 4.6e-06 55.8 73 41.1
Thecc.01G119800 Theobroma cacao HOM05D000307 ORTHO05D000166 4.6e-06 55.8 75 34.7
TPR.G26403 Trifolium pratense HOM05D008089 ORTHO05D000166 4.6e-06 55.8 74 37.8
BcaB04g18996 Brassica carinata HOM05D006887 ORTHO05D004325 6.1e-06 55.5 60 45.0
Gorai.003G049800 Gossypium raimondii HOM05D000307 ORTHO05D000166 6.1e-06 55.5 59 42.4
Duzib147G0158 Durio zibethinus HOM05D000307 ORTHO05D000166 7.9e-06 55.1 59 40.7
Medtr6g018920 Medicago truncatula HOM05D000307 ORTHO05D000166 7.9e-06 55.1 77 37.7
PGR004G1959 Punica granatum HOM05D000307 ORTHO05D000166 7.9e-06 55.1 80 36.2


User provided reference genes

Program Settings