Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g47170 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-227 792.7 382 100.0
FAN14G1402 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.9e-186 653.7 384 85.9
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-168 596.7 384 78.1
FAN14G3911 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-147 526.9 387 71.8
FAN10G0746 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.7e-147 525.4 387 71.6
FAN05G3822 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.0e-146 521.9 348 77.3
FvH4_6g47190 Fragaria vesca HOM05D006368 ORTHO05D006739 3.9e-141 505.4 378 70.9
FAN02G2985 Fragaria x ananassa HOM05D002060 ORTHO05D002098 6.5e-120 434.9 369 65.3
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 3.9e-72 276.2 432 42.6
RcHm_v2.0_Chr2g0166171 Rosa chinensis HOM05D006368 ORTHO05D006739 1.5e-71 274.2 411 43.3
FAN09G1584 Fragaria x ananassa HOM05D006368 ORTHO05D035370 3.3e-71 273.1 374 45.5
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.2e-66 255.0 425 40.9
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-65 254.6 425 40.9
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-64 251.1 393 42.5
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 8.6e-64 248.4 393 42.2
FvH4_6g47161 Fragaria vesca HOM05D006368 ORTHO05D035370 8.6e-56 221.9 369 42.3
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 8.1e-46 188.7 415 33.0
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 1.2e-44 184.9 409 33.3
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 7.6e-44 182.2 411 33.8
FAN08G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-43 180.6 408 33.8
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 2.9e-43 180.3 462 30.7
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 1.1e-42 178.3 429 34.0
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 1.1e-42 178.3 402 34.1
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-42 178.3 429 34.0
FAN18G3544 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-42 178.3 408 33.8
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.2e-42 176.4 410 33.7
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.9e-40 169.9 429 33.3
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 5.1e-40 169.5 460 28.5
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 6.6e-40 169.1 404 33.2
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 2.5e-39 167.2 440 31.4
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.3e-39 166.8 404 32.4
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 5.6e-39 166.0 460 30.0
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 1.8e-37 161.0 396 32.1
FAN02G3903 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.0e-37 159.8 423 30.5
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.0e-37 159.8 371 33.7
FAN05G1932 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.0e-37 158.7 384 32.3
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.9e-36 155.2 389 32.6
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 3.8e-35 153.3 381 32.8
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.1e-34 149.1 387 31.5
MD09G1027500 Malus domestica HOM05D006368 ORTHO05D006739 1.6e-33 147.9 479 29.2
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.0e-33 146.0 462 29.2
FAN05G3646 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.3e-31 139.8 269 37.9
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 3.7e-30 136.7 370 33.0
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 3.1e-29 133.7 393 31.0
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 5.3e-29 132.9 397 31.2
FAN05G1788 Fragaria x ananassa HOM05D006368 ORTHO05D025547 5.3e-29 132.9 380 32.4
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.3e-29 132.9 286 32.2
FvH4_6g46020 Fragaria vesca HOM05D006368 ORTHO05D025547 1.5e-28 131.3 383 32.9
FAN02G0248 Fragaria x ananassa HOM05D006368 ORTHO05D025547 1.5e-28 131.3 383 32.4
FAN14G1520 Fragaria x ananassa HOM05D006368 ORTHO05D025547 1.5e-28 131.3 383 32.9
FAN14G5490 Fragaria x ananassa HOM05D006368 ORTHO05D025547 1.5e-28 131.3 383 32.9
FAN04G2785 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.6e-28 129.0 393 30.8
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.9e-27 126.3 480 28.5
FAN02G2153 Fragaria x ananassa HOM05D006186 ORTHO05D009138 1.1e-26 125.2 86 70.9
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-26 124.8 266 35.0
FAN09G0606 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.1e-26 122.5 206 36.4
FAN02G1443 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.1e-25 120.9 171 43.9
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 2.7e-25 120.6 236 33.1
FvH4_3g30930 Fragaria vesca HOM05D006368 ORTHO05D006739 3.0e-24 117.1 359 29.8
FAN02G0769 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.1e-24 116.3 371 28.0
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.7e-24 115.9 237 32.5
FAN14G0584 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.7e-24 115.5 367 28.6
FAN14G2798 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.7e-24 115.5 367 28.6
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 2.5e-23 114.0 425 28.2
FAN14G2825 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-23 114.0 80 71.2
Prupe.3G291200 Prunus persica HOM05D006368 ORTHO05D006739 3.3e-23 113.6 469 26.7
FAN02G0044 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.7e-23 112.8 390 29.5
FAN05G5450 Fragaria x ananassa HOM05D006368 ORTHO05D035370 5.7e-23 112.8 65 81.5
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 2.8e-22 110.5 355 30.1
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.8e-22 109.8 361 28.3
FvH4_4g23711 Fragaria vesca HOM05D006368 ORTHO05D006739 6.3e-22 109.4 425 27.1
FAN09G3725 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.9e-21 105.9 217 35.0
FAN12G2895 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.9e-21 105.9 426 28.2
FvH4_6g49280 Fragaria vesca HOM05D006368 ORTHO05D006739 2.6e-20 104.0 280 31.1
Ca_07681_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.2e-19 100.9 411 27.7
FvH4_6g39721 Fragaria vesca HOM05D006368 ORTHO05D006739 2.2e-19 100.9 284 28.2
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 2.9e-19 100.5 225 31.6
Lalb_Chr19g0133241 Lupinus albus HOM05D006368 ORTHO05D006739 2.9e-19 100.5 429 25.9
FAN14G3691 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-18 98.6 217 33.6
FAN15G0762 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-17 95.1 286 29.0
FAN15G3238 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-17 95.1 350 28.3
FAN24G0202 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-17 94.7 300 29.0
FvH4_3g28140 Fragaria vesca HOM05D010931 ORTHO05D013603 2.7e-17 94.0 427 26.7
FAN11G4008 Fragaria x ananassa HOM05D010931 ORTHO05D013603 3.5e-17 93.6 425 25.6
FAN09G2575 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.1e-17 92.8 346 28.9
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.9e-17 92.4 309 28.2
FAN14G3251 Fragaria x ananassa HOM05D006368 ORTHO05D201493 7.9e-17 92.4 142 40.1
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.9e-17 92.4 428 26.9
TAR626G0415 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-16 92.0 426 27.0
Prupe.1G016300 Prunus persica HOM05D006368 ORTHO05D006739 2.3e-16 90.9 199 35.7
FAN02G3800 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.0e-16 90.5 101 47.5
FAN02G1786 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.7e-16 89.4 230 31.7
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.9e-15 87.8 393 27.5
Ca_07674_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.5e-15 87.4 398 25.1
FAN04G1211 Fragaria x ananassa HOM05D010931 ORTHO05D013603 2.5e-15 87.4 402 25.4
Ca_07680_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 4.3e-15 86.7 418 26.1
Medtr7g069800 Medicago truncatula HOM05D010147 ORTHO05D006739 4.3e-15 86.7 419 24.6
Lalb_Chr19g0124301 Lupinus albus HOM05D010147 ORTHO05D006739 1.3e-14 85.1 441 24.3
Medtr7g069850 Medicago truncatula HOM05D010147 ORTHO05D006739 2.2e-14 84.3 410 24.6
FAN05G5254 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.7e-14 83.6 82 52.4
Medtr7g069870 Medicago truncatula HOM05D010147 ORTHO05D006739 3.7e-14 83.6 428 24.8
CiPaw.08G070000 Carya illinoinensis HOM05D000151 ORTHO05D000074 6.3e-14 82.8 421 25.9
FAN05G0250 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.3e-14 82.8 399 27.8
Medtr7g069820 Medicago truncatula HOM05D010147 ORTHO05D006739 1.1e-13 82.0 420 24.0
Ca_07672_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 5.3e-13 79.7 411 25.1
FAN14G3548 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.9e-13 79.3 185 33.5
MD05G1357800 Malus domestica HOM05D000151 ORTHO05D000074 6.9e-13 79.3 400 24.5
FAN05G1009 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.0e-13 79.0 191 30.9
TPR.G21321 Trifolium pratense HOM05D010147 ORTHO05D006739 9.0e-13 79.0 249 28.1
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 1.2e-12 78.6 441 24.5
Sabra02G0011500 Salix brachista HOM05D000151 ORTHO05D000074 1.5e-12 78.2 423 23.4
PSO210G5407 Papaver somniferum HOM05D000151 ORTHO05D000074 2.6e-12 77.4 400 25.2
FvH4_3g37300 Fragaria vesca HOM05D006368 ORTHO05D006739 5.9e-12 76.3 156 32.1
Dinv43794 Davidia involucrata HOM05D000151 ORTHO05D000074 1.0e-11 75.5 414 23.9
FAN17G1663 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.0e-11 75.5 276 29.0
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.0e-11 75.5 422 26.3
FAN02G0730 Fragaria x ananassa HOM05D011252 ORTHO05D013603 1.3e-11 75.1 192 29.7
CiPaw.08G069900 Carya illinoinensis HOM05D000151 ORTHO05D000074 2.9e-11 73.9 426 27.5
Prupe.1G004300 Prunus persica HOM05D006368 ORTHO05D006739 2.9e-11 73.9 141 35.5
FAN18G1252 Fragaria x ananassa HOM05D007346 ORTHO05D009044 5.0e-11 73.2 439 25.3
Dinv20253 Davidia involucrata HOM05D000151 ORTHO05D000074 6.5e-11 72.8 246 27.6
FAN04G2702 Fragaria x ananassa HOM05D010931 ORTHO05D013603 6.5e-11 72.8 225 30.2
Potri.006G015601 Populus trichocarpa HOM05D000151 ORTHO05D000074 6.5e-11 72.8 421 22.1
PSO170G2683 Papaver somniferum HOM05D000151 ORTHO05D000074 8.5e-11 72.4 400 24.5
FvH4_6g22332 Fragaria vesca HOM05D010931 ORTHO05D016562 1.1e-10 72.0 215 30.2
FvH4_6g16971 Fragaria vesca HOM05D011252 ORTHO05D029353 1.4e-10 71.6 194 29.4
FAN22G0881 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-10 71.6 147 34.7
Prupe.1G019300 Prunus persica HOM05D006368 ORTHO05D006739 2.5e-10 70.9 91 41.8
FvH4_6g22212 Fragaria vesca HOM05D010931 ORTHO05D016562 3.2e-10 70.5 228 29.8
FAN12G2737 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.2e-10 70.5 267 27.0
Lj2g0018976 Lotus japonicus HOM05D008995 ORTHO05D000074 3.2e-10 70.5 365 23.3
Dinv43798 Davidia involucrata HOM05D000713 ORTHO05D000547 7.2e-10 69.3 231 25.5
FAN14G0447 Fragaria x ananassa HOM05D011252 ORTHO05D029353 7.2e-10 69.3 192 28.1
Manes.07G048900 Manihot esculenta HOM05D000151 ORTHO05D000074 9.4e-10 68.9 230 27.8
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 9.4e-10 68.9 439 26.9
RcHm_v2.0_Chr4g0434481 Rosa chinensis HOM05D008995 ORTHO05D000074 9.4e-10 68.9 340 24.7
FvH4_4g01590 Fragaria vesca HOM05D007346 ORTHO05D009044 1.2e-09 68.6 267 27.0
FvH4_6g16960 Fragaria vesca HOM05D011252 ORTHO05D029353 1.2e-09 68.6 192 28.1
FAN02G2364 Fragaria x ananassa HOM05D011252 ORTHO05D029353 1.2e-09 68.6 194 29.4
FAN04G3148 Fragaria x ananassa HOM05D010931 ORTHO05D013603 1.6e-09 68.2 317 24.9
FvH4_2g13532 Fragaria vesca HOM05D006368 ORTHO05D006739 2.1e-09 67.8 217 28.6
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 2.1e-09 67.8 230 28.3
TWI34G1020 Tripterygium wilfordii HOM05D008995 ORTHO05D000074 2.1e-09 67.8 401 22.9
MD08G1006100 Malus domestica HOM05D000151 ORTHO05D000074 3.6e-09 67.0 430 25.6
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 4.6e-09 66.6 443 24.6
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 6.1e-09 66.2 428 23.4
Medtr1g069525 Medicago truncatula HOM05D010147 ORTHO05D006739 6.1e-09 66.2 400 23.8
FAN18G0417 Fragaria x ananassa HOM05D010931 ORTHO05D013603 7.9e-09 65.9 317 24.9
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 7.9e-09 65.9 426 24.4
FAN15G3747 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-08 64.7 90 40.0
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.8e-08 64.7 435 23.7
FvH4_2g21230 Fragaria vesca HOM05D000151 ORTHO05D000074 3.9e-08 63.5 276 29.3
Aqoxy2G00555 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.1e-08 63.2 413 24.0
FvH4_6g21331 Fragaria vesca HOM05D024214 ORTHO05D016562 6.7e-08 62.8 228 27.6
FAN20G2910 Fragaria x ananassa HOM05D007346 ORTHO05D009044 6.7e-08 62.8 452 23.0
Gohir.D05G281400 Gossypium hirsutum HOM05D007346 ORTHO05D009044 6.7e-08 62.8 449 23.6
Hma1.2p1_0112F.1_g054880 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 6.7e-08 62.8 217 28.6
PGR031G1698 Punica granatum HOM05D000151 ORTHO05D000074 8.8e-08 62.4 376 25.5
COL.COLO4_09712 Corchorus olitorius HOM05D001286 ORTHO05D000440 1.1e-07 62.0 195 27.2
Prupe.6G178100 Prunus persica HOM05D008995 ORTHO05D000074 1.1e-07 62.0 340 23.2
Haze_14264 Corylus avellana HOM05D001286 ORTHO05D000440 2.0e-07 61.2 211 28.9
Dinv25349 Davidia involucrata HOM05D006368 ORTHO05D006739 2.0e-07 61.2 259 25.1
FAN05G2214 Fragaria x ananassa HOM05D011252 ORTHO05D016562 2.0e-07 61.2 213 27.2
FAN14G2254 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-07 60.8 78 44.9
FAN05G0916 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.3e-07 60.5 152 29.6
HanXRQChr17g0566181 Helianthus annuus HOM05D000151 ORTHO05D000074 4.3e-07 60.1 370 25.4
FAN28G1502 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.7e-07 59.7 108 35.2
Nn1g04037 Nelumbo nucifera HOM05D000151 ORTHO05D000074 5.7e-07 59.7 208 28.8
FAN09G4111 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.4e-07 59.3 174 27.6
FAN02G1675 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.7e-07 58.9 116 31.9
Cfa007811 Carpinus fangiana HOM05D001286 ORTHO05D000440 1.3e-06 58.5 225 30.2
FAN04G3014 Fragaria x ananassa HOM05D010931 ORTHO05D013603 1.3e-06 58.5 296 24.7
Sed0022040 Sechium edule HOM05D008995 ORTHO05D000074 1.3e-06 58.5 343 24.2
FAN12G4018 Fragaria x ananassa HOM05D017087 ORTHO05D019163 1.7e-06 58.2 140 32.1
Medtr1g025800 Medicago truncatula HOM05D010147 ORTHO05D006739 1.7e-06 58.2 289 25.3
Medtr1g069530 Medicago truncatula HOM05D010147 ORTHO05D006739 2.2e-06 57.8 229 27.5
RcHm_v2.0_Chr6g0247891 Rosa chinensis HOM05D007346 ORTHO05D009044 2.8e-06 57.4 214 26.6
Migut.A00760 Erythranthe guttata HOM05D000151 ORTHO05D000074 4.8e-06 56.6 352 25.3
FAN20G0778 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.3e-06 56.2 243 29.6


User provided reference genes

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