Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g40890 Fragaria vesca HOM05D006200 ORTHO05D007569 7.1e-59 230.3 112 100.0
FAN02G1931 Fragaria x ananassa HOM05D006200 ORTHO05D007569 2.1e-58 228.8 112 99.1
RcHm_v2.0_Chr2g0156461 Rosa chinensis HOM05D006200 ORTHO05D007569 3.3e-56 221.5 112 95.5
FAN09G2038 Fragaria x ananassa HOM05D006200 ORTHO05D007569 7.4e-56 220.3 127 88.2
FAN05G3226 Fragaria x ananassa HOM05D006200 ORTHO05D007569 2.1e-55 218.8 127 87.4
FAN14G5749 Fragaria x ananassa HOM05D006200 ORTHO05D007569 2.1e-55 218.8 127 87.4
Haze_12649 Corylus avellana HOM05D006200 ORTHO05D007569 5.8e-53 210.7 112 89.3
MD09G1123700 Malus domestica HOM05D006200 ORTHO05D007569 7.6e-53 210.3 112 89.3
ClCG02G002790 Citrullus lanatus HOM05D006200 ORTHO05D007569 2.9e-52 208.4 112 87.5
Prupe.3G200400 Prunus persica HOM05D006200 ORTHO05D007569 6.5e-52 207.2 112 85.7
MD17G1114500 Malus domestica HOM05D006200 ORTHO05D007569 2.5e-51 205.3 112 87.5
QL08p028355 Quercus lobata HOM05D006200 ORTHO05D007569 3.2e-51 204.9 111 85.6
Ciclev10017136m.g Citrus clementina HOM05D006200 ORTHO05D007569 5.5e-51 204.1 112 84.8
Cfa014235 Carpinus fangiana HOM05D000160 ORTHO05D000496 7.1e-51 203.8 112 86.6
Hma1.2p1_2053F.1_g312740 Hydrangea macrophylla HOM05D006200 ORTHO05D007569 9.3e-51 203.4 112 83.9
Lalb_Chr04g0250001 Lupinus albus HOM05D006200 ORTHO05D007569 1.2e-50 203.0 112 84.8
Aqoxy4G02230 Aquilegia oxysepala HOM05D006200 ORTHO05D007569 1.6e-50 202.6 112 84.8
arahy.Tifrunner.gnm1.ann1.GBED9Y Arachis hypogaea HOM05D006200 ORTHO05D007569 1.6e-50 202.6 112 85.7
PSO675G7132 Papaver somniferum HOM05D006200 ORTHO05D007569 1.6e-50 202.6 112 83.9
Potri.014G164500 Populus trichocarpa HOM05D006200 ORTHO05D007569 1.6e-50 202.6 112 84.8
Sed0007295 Sechium edule HOM05D006200 ORTHO05D007569 1.6e-50 202.6 112 85.7
SGA_v2.0_scaffold181G39681 Striga asiatica HOM05D006200 ORTHO05D007569 1.6e-50 202.6 112 83.9
Actinidia09782 Actinidia chinensis HOM05D006200 ORTHO05D007569 2.7e-50 201.8 112 84.8
MELO3C024201.2 Cucumis melo HOM05D006200 ORTHO05D007569 3.5e-50 201.4 117 83.8
Nn1g07469 Nelumbo nucifera HOM05D006200 ORTHO05D007569 3.5e-50 201.4 112 84.8
PGSC0003DMG400006126 Solanum tuberosum HOM05D006200 ORTHO05D007569 3.5e-50 201.4 112 83.0
Rhsim04G0037800 Rhododendron simsii HOM05D006200 ORTHO05D007569 4.6e-50 201.1 112 83.9
Psat2g026360 Pisum sativum HOM05D006200 ORTHO05D007569 6.0e-50 200.7 112 83.0
Medtr5g085420 Medicago truncatula HOM05D006200 ORTHO05D007569 7.9e-50 200.3 112 81.2
Peaxi162Scf00776g00024 Petunia axillaris HOM05D006200 ORTHO05D007569 7.9e-50 200.3 112 84.8
CSS0021565 Camellia sinensis var. sinensis HOM05D006200 ORTHO05D007569 1.0e-49 199.9 112 83.0
Lsat_1_v5_gn_5_121761 Lactuca sativa HOM05D006200 ORTHO05D007569 1.0e-49 199.9 112 83.0
Manes.13G063700 Manihot esculenta HOM05D006200 ORTHO05D007569 1.0e-49 199.9 112 84.8
Atru.chr6.3355 Acer truncatum HOM05D006200 ORTHO05D007569 1.8e-49 199.1 112 83.0
Hma1.2p1_0545F.1_g176060 Hydrangea macrophylla HOM05D006200 ORTHO05D007569 1.8e-49 199.1 112 83.9
HPP92_012226 Vanilla planifolia HOM05D006200 ORTHO05D007569 2.3e-49 198.7 112 83.0
PSO541G4622 Papaver somniferum HOM05D006200 ORTHO05D007569 3.0e-49 198.4 112 82.1
ATR0624G019 Amborella trichopoda HOM05D006200 ORTHO05D007569 3.9e-49 198.0 112 83.0
CAN.G1036.6 Capsicum annuum HOM05D006200 ORTHO05D007569 3.9e-49 198.0 112 82.1
LjContig00029g0002447 Lotus japonicus HOM05D006200 ORTHO05D007569 3.9e-49 198.0 112 83.0
Sopen07g024150 Solanum pennellii HOM05D006200 ORTHO05D007569 3.9e-49 198.0 112 82.1
CiPaw.04G196600 Carya illinoinensis HOM05D006200 ORTHO05D007569 5.1e-49 197.6 112 83.0
Nitab4.5_0001774g0080 Nicotiana tabacum HOM05D006200 ORTHO05D007569 5.1e-49 197.6 112 82.1
Sed0012997 Sechium edule HOM05D006200 ORTHO05D007569 5.1e-49 197.6 110 85.5
Solyc07g047700.4 Solanum lycopersicum HOM05D006200 ORTHO05D007569 5.1e-49 197.6 112 81.2
TAR626G0047 Trochodendron aralioides HOM05D006200 ORTHO05D007569 5.1e-49 197.6 112 80.4
Dinv05360 Davidia involucrata HOM05D006200 ORTHO05D007569 6.7e-49 197.2 112 83.0
HanXRQChr10g0306841 Helianthus annuus HOM05D006200 ORTHO05D007569 1.5e-48 196.1 112 81.2
Rhsim02G0017500 Rhododendron simsii HOM05D006200 ORTHO05D007569 1.5e-48 196.1 112 81.2
TWI36G1668 Tripterygium wilfordii HOM05D006200 ORTHO05D007569 1.5e-48 196.1 112 81.2
MSTRG.14921 Avicennia marina HOM05D006200 ORTHO05D007569 2.5e-48 195.3 112 80.4
Cc05_g02100 Coffea canephora HOM05D006200 ORTHO05D007569 4.3e-48 194.5 112 83.9
Glyma.14G048700 Glycine max HOM05D006200 ORTHO05D007569 4.3e-48 194.5 112 79.5
SalBow7G0450 Salvia bowleyana HOM05D006200 ORTHO05D007569 4.3e-48 194.5 112 80.4
CARHR102920 Cardamine hirsuta HOM05D006200 ORTHO05D007569 5.7e-48 194.1 112 82.1
THA.LOC104815354 Tarenaya hassleriana HOM05D006200 ORTHO05D007569 5.7e-48 194.1 112 83.0
Glyma.02G268700 Glycine max HOM05D006200 ORTHO05D007569 7.4e-48 193.7 112 79.5
CDE07G1212 Ceratophyllum demersum HOM05D006200 ORTHO05D007569 9.7e-48 193.4 112 80.4
Carub.0003s2650 Capsella rubella HOM05D006200 ORTHO05D007569 1.3e-47 193.0 112 80.4
Migut.M00041 Erythranthe guttata HOM05D006200 ORTHO05D007569 1.3e-47 193.0 112 81.2
Oeu040457.1 Olea europaea HOM05D006200 ORTHO05D007569 2.8e-47 191.8 112 79.5
TPR.G25628 Trifolium pratense HOM05D006200 ORTHO05D007569 6.3e-47 190.7 112 77.7
A07p06630 Brassica napus HOM05D006200 ORTHO05D007569 8.2e-47 190.3 112 80.4
CANSAT64G0383 Cannabis sativa HOM05D006200 ORTHO05D007569 8.2e-47 190.3 112 77.7
C07p10040 Brassica napus HOM05D006200 ORTHO05D007569 1.1e-46 189.9 112 80.4
BraA07t28456Z Brassica rapa HOM05D006200 ORTHO05D007569 1.1e-46 189.9 112 80.4
Cc02_g04700 Coffea canephora HOM05D006200 ORTHO05D007569 1.1e-46 189.9 112 80.4
Thhalv10002727m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 1.1e-46 189.9 112 80.4
AL3G42530 Arabidopsis lyrata HOM05D006200 ORTHO05D007569 1.4e-46 189.5 112 79.5
AT2G04900 Arabidopsis thaliana HOM05D006200 ORTHO05D007569 1.4e-46 189.5 112 79.5
BcaB06g26789 Brassica carinata HOM05D006200 ORTHO05D007569 1.4e-46 189.5 112 80.4
Sp3g23500 Schrenkiella parvula HOM05D006200 ORTHO05D007569 1.8e-46 189.1 112 79.5
BcaC06g35887 Brassica carinata HOM05D006200 ORTHO05D007569 3.1e-46 188.3 112 79.5
BolC7t41451H Brassica oleracea HOM05D006200 ORTHO05D007569 3.1e-46 188.3 112 79.5
Os03g0751000 Oryza sativa ssp. japonica HOM05D006200 ORTHO05D007569 5.3e-46 187.6 111 78.4
Manes.12G061800 Manihot esculenta HOM05D006200 ORTHO05D007569 3.4e-45 184.9 108 83.3
Cpa.g.sc136.18 Carica papaya HOM05D006200 ORTHO05D007569 4.5e-45 184.5 112 75.9
Zm00001eb057520 Zea mays HOM05D006200 ORTHO05D007569 4.5e-45 184.5 111 77.5
Sabra14G0125300 Salix brachista HOM05D006200 ORTHO05D007569 7.6e-45 183.7 139 66.9
vmacro09406 Vaccinium macrocarpon HOM05D006200 ORTHO05D007569 1.0e-44 183.3 145 64.1
Aa31sc107G30 Aethionema arabicum HOM05D006200 ORTHO05D007569 1.3e-44 183.0 141 66.7
Thecc.01G190500 Theobroma cacao HOM05D006200 ORTHO05D007569 1.7e-44 182.6 107 79.4
Gohir.A07G167000 Gossypium hirsutum HOM05D006200 ORTHO05D007569 2.2e-44 182.2 112 75.9
Gohir.D07G172300 Gossypium hirsutum HOM05D006200 ORTHO05D007569 2.2e-44 182.2 112 75.9
Gorai.001G192600 Gossypium raimondii HOM05D006200 ORTHO05D007569 2.2e-44 182.2 112 75.9
GSVIVG01030518001 Vitis vinifera HOM05D006200 ORTHO05D007569 2.9e-44 181.8 107 78.5
GSVIVG01030523001 Vitis vinifera HOM05D006200 ORTHO05D007569 2.9e-44 181.8 107 78.5
CSS0018696 Camellia sinensis var. sinensis HOM05D006200 ORTHO05D007569 2.5e-43 178.7 100 84.0
Duzib138G0810 Durio zibethinus HOM05D006200 ORTHO05D007569 4.2e-43 177.9 112 72.3
SEGI_07661 Sequoiadendron giganteum HOM05D006200 ORTHO05D007569 2.7e-42 175.3 112 74.1
Lj8A134G80 Lonicera japonica HOM05D006200 ORTHO05D007569 7.9e-42 173.7 98 83.7
Zm00001eb181090 Zea mays HOM05D006200 ORTHO05D007569 3.0e-41 171.8 110 74.5
ECA234G3013 Erigeron canadensis HOM05D006200 ORTHO05D007569 5.7e-40 167.5 98 80.6
Eucgr.A01040 Eucalyptus grandis HOM05D006200 ORTHO05D007569 2.8e-39 165.2 98 79.6
AUR62029092 Chenopodium quinoa HOM05D006200 ORTHO05D007569 1.1e-38 163.3 96 77.1
MBI16_g28733_MAGBIO Magnolia biondii HOM05D006200 ORTHO05D007569 1.5e-37 159.5 99 76.8
Zm00001eb025380 Zea mays HOM05D006200 ORTHO05D007569 2.0e-37 159.1 128 62.5
COL.COLO4_33018 Corchorus olitorius HOM05D006200 ORTHO05D007569 2.6e-37 158.7 155 54.2
Mapoly0007s0279 Marchantia polymorpha HOM05D006200 ORTHO05D007569 3.4e-37 158.3 111 68.5
arahy.Tifrunner.gnm1.ann1.HJ95Y2 Arachis hypogaea HOM05D006200 ORTHO05D007569 3.0e-33 145.2 79 86.1
Phvul.008G213600 Phaseolus vulgaris HOM05D006200 ORTHO05D007569 3.9e-33 144.8 79 83.5
SMO356G0472 Selaginella moellendorffii HOM05D006200 ORTHO05D007569 8.8e-33 143.7 87 73.6
Pp3c6_18900 Physcomitrium patens HOM05D006200 ORTHO05D007569 1.1e-32 143.3 98 69.4
Pp3c6_18880 Physcomitrium patens HOM05D006200 ORTHO05D007569 4.4e-32 141.4 108 59.3
Zm00001eb402120 Zea mays HOM05D006200 ORTHO05D007569 1.7e-31 139.4 109 64.2
CsaV3_7G002590 Cucumis sativus L. HOM05D006200 ORTHO05D007569 2.2e-31 139.0 75 90.7
DCAR_021101 Daucus carota HOM05D006200 ORTHO05D007569 1.4e-30 136.3 79 79.7
Cre12.g543050 Chlamydomonas reinhardtii HOM05D006200 ORTHO05D007569 7.7e-29 130.6 108 54.6
MSTRG.6639 Avicennia marina HOM05D006200 ORTHO05D007569 2.2e-28 129.0 75 82.7
Zm00001eb093000 Zea mays HOM05D006200 ORTHO05D007569 1.5e-24 116.3 109 56.0
AUR62015021 Chenopodium quinoa HOM05D006200 ORTHO05D007569 1.3e-23 113.2 64 76.6
Ah.01g013830 Amaranthus hybridus HOM05D004982 ORTHO05D007569 2.2e-23 112.5 63 77.8
Thhalv10009367m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 2.2e-23 112.5 64 79.7
PGR042G1757 Punica granatum HOM05D006200 ORTHO05D007569 2.2e-23 112.5 64 76.6
Thhalv10016039m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 3.7e-23 111.7 64 78.1
SHI10134 Sapria himalayana HOM05D006200 ORTHO05D007569 3.7e-23 111.7 82 64.6
Thhalv10023849m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 6.3e-23 110.9 64 78.1
Zm00001eb414470 Zea mays HOM05D006200 ORTHO05D007569 8.2e-23 110.5 69 75.4
Thhalv10027363m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 5.3e-22 107.8 64 76.6
AagrBONN_evm.TU.Sc2ySwM_368.977 Anthoceros agrestis HOM05D006200 ORTHO05D007569 1.6e-21 106.3 64 70.3
MD17G1249100 Malus domestica HOM05D006200 ORTHO05D007569 1.9e-19 99.4 50 90.0
Pp3c16_4930 Physcomitrium patens HOM05D006200 ORTHO05D007569 2.1e-18 95.9 110 48.2
Pp3c16_5110 Physcomitrium patens HOM05D006200 ORTHO05D007569 2.1e-18 95.9 110 48.2
Hund21568 Selenicereus undatus HOM05D006200 ORTHO05D007569 3.0e-17 92.0 152 42.1
Aqoxy5G00520 Aquilegia oxysepala HOM05D006200 ORTHO05D007569 2.9e-12 75.5 40 82.5
Zm00001eb125940 Zea mays HOM05D000001 ORTHO05D007569 2.9e-12 75.5 54 70.4
RcHm_v2.0_Chr5g0026981 Rosa chinensis HOM05D006200 ORTHO05D007569 1.6e-10 69.7 37 81.1
C03p34670 Brassica napus HOM05D006200 ORTHO05D007569 4.4e-08 61.6 50 66.0
BolC3t15778H Brassica oleracea HOM05D006200 ORTHO05D007569 4.4e-08 61.6 50 66.0


User provided reference genes

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