Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g39721 Fragaria vesca HOM05D006368 ORTHO05D006739 2.3e-176 622.1 305 100.0
FAN02G0769 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-138 496.9 286 87.8
FAN14G0584 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.1e-121 439.5 264 84.8
FAN14G2798 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.1e-121 439.5 264 84.8
FAN14G4512 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.7e-118 428.7 259 84.6
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 2.0e-79 300.1 300 55.3
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-64 250.8 298 50.3
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 8.4e-62 241.5 298 49.0
FAN05G1932 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-59 233.8 288 48.6
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.7e-57 226.1 274 49.6
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 1.5e-55 220.7 298 45.6
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-52 211.1 252 50.0
FAN05G0916 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.1e-51 205.7 204 60.8
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.1e-48 196.1 290 44.1
FAN08G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.7e-43 178.3 296 42.6
FAN18G3544 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-42 177.6 296 42.2
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 2.4e-40 170.2 293 41.0
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.1e-40 169.9 296 40.5
FAN05G1009 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.9e-40 168.7 215 47.0
FvH4_3g30930 Fragaria vesca HOM05D006368 ORTHO05D006739 2.0e-39 167.2 318 37.7
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 2.6e-39 166.8 330 39.4
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-39 166.8 330 39.4
FAN05G3215 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.4e-39 166.4 274 42.0
FvH4_6g49280 Fragaria vesca HOM05D006368 ORTHO05D006739 5.9e-39 165.6 265 41.5
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-38 164.1 329 38.9
FAN02G0044 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-38 163.7 283 39.6
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 3.8e-38 162.9 337 38.9
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 2.7e-36 156.8 293 39.2
FAN09G3776 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.8e-35 151.8 173 52.0
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 8.8e-35 151.8 319 33.9
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.3e-33 145.6 322 36.3
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.1e-32 143.3 277 40.4
MD09G1027500 Malus domestica HOM05D006368 ORTHO05D006739 3.1e-32 143.3 328 36.3
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 2.0e-31 140.6 309 34.3
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 4.5e-31 139.4 319 33.9
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.8e-30 136.3 324 34.0
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 6.5e-30 135.6 300 34.0
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 1.1e-29 134.8 324 34.6
FAN02G3903 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.2e-29 132.9 333 36.3
FAN02G1675 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.9e-27 126.3 120 56.7
Prupe.3G291200 Prunus persica HOM05D006368 ORTHO05D006739 3.9e-27 126.3 334 32.3
FAN15G3238 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.2e-27 125.9 302 32.1
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 5.7e-26 122.5 317 33.8
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 7.4e-26 122.1 262 35.5
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.4e-26 122.1 262 35.5
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 9.7e-26 121.7 299 37.5
FAN05G4522 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.7e-26 121.7 143 49.0
FAN15G0762 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-25 121.3 282 34.4
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-25 120.6 315 33.0
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 1.1e-24 118.2 269 34.9
FAN04G2785 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-24 117.9 291 33.7
RcHm_v2.0_Chr2g0166171 Rosa chinensis HOM05D006368 ORTHO05D006739 9.1e-24 115.2 317 31.5
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 9.1e-24 115.2 284 34.2
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 2.0e-23 114.0 273 34.1
FvH4_6g49640 Fragaria vesca HOM05D006368 ORTHO05D006739 5.9e-23 112.5 351 31.6
FAN14G3691 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.9e-23 112.5 126 51.6
FAN14G2460 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.0e-22 111.7 351 31.6
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.0e-22 109.4 290 28.6
FvH4_6g47170 Fragaria vesca HOM05D006368 ORTHO05D006739 6.1e-20 102.4 284 28.2
FAN09G2575 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.0e-20 102.1 288 33.3
FAN24G0202 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.0e-19 101.7 301 31.6
Ca_07674_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 1.4e-19 101.3 318 30.8
FAN02G1786 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.8e-19 98.6 242 33.5
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 2.6e-18 97.1 285 31.9
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.3e-18 96.7 285 31.9
FvH4_4g23711 Fragaria vesca HOM05D006368 ORTHO05D006739 5.7e-18 95.9 345 27.8
TAR636G0219 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.7e-18 95.1 288 28.8
TAR636G2580 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.2e-17 94.0 279 29.4
FAN12G2895 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.7e-17 93.2 344 27.6
FvH4_6g47190 Fragaria vesca HOM05D006368 ORTHO05D006739 9.1e-16 88.6 278 29.1
TWI38G0386 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 9.1e-16 88.6 304 27.6
Ca_07681_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 1.2e-15 88.2 298 28.5
FAN17G1663 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-15 87.8 346 26.9
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.8e-14 83.2 187 34.8
FAN05G3822 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.5e-14 82.0 260 27.3
TAR371G0808 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.2e-13 80.1 292 26.4
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 4.2e-13 79.7 301 27.9
FAN09G3725 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.2e-13 79.7 112 43.8
FAN14G1402 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.5e-13 79.3 269 27.1
TAR636G3198 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.4e-13 78.6 294 25.5
Lalb_Chr19g0124301 Lupinus albus HOM05D010147 ORTHO05D006739 1.6e-12 77.8 300 25.0
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.6e-12 77.8 289 26.0
Ca_07683_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.1e-12 77.4 184 34.8
FvH4_3g37300 Fragaria vesca HOM05D006368 ORTHO05D006739 2.1e-12 77.4 153 34.0
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.7e-12 77.0 322 26.1
TAR636G1620 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.6e-12 76.6 294 25.5
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.6e-12 76.6 298 25.2
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.6e-12 76.6 298 25.2
TAR636G0604 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.1e-12 75.9 293 24.9
TAR636G0813 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.1e-12 75.9 279 24.4
TAR636G2770 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.0e-12 75.5 299 26.4
TWI38G2055 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.8e-11 74.3 340 25.6
Lj1g0005351 Lotus japonicus HOM05D010147 ORTHO05D006739 3.0e-11 73.6 248 29.0
TPR.G38170 Trifolium pratense HOM05D010147 ORTHO05D006739 6.8e-11 72.4 330 27.6
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.8e-11 72.0 306 24.5
FAN20G2910 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.2e-10 71.6 345 24.1
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.6e-10 70.5 290 27.6
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 2.6e-10 70.5 220 28.2
FAN18G3160 Fragaria x ananassa HOM05D010931 ORTHO05D013603 4.4e-10 69.7 321 25.9
FvH4_5g03600 Fragaria vesca HOM05D010931 ORTHO05D013603 5.7e-10 69.3 321 25.5
TAR626G1895 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.5e-10 68.9 319 24.8
Dinv25349 Davidia involucrata HOM05D006368 ORTHO05D006739 1.3e-09 68.2 279 28.0
FAN14G0026 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-09 68.2 128 35.9
QL02p075077 Quercus lobata HOM05D000151 ORTHO05D017935 1.7e-09 67.8 289 27.7
FAN10G0746 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-09 67.4 135 32.6
FAN14G3911 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-09 67.4 135 32.6
FAN08G1863 Fragaria x ananassa HOM05D010931 ORTHO05D013603 2.8e-09 67.0 295 26.1
FAN05G0250 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.7e-09 66.6 215 31.6
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.8e-09 66.2 229 31.9
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 6.3e-09 65.9 303 23.8
FAN04G2702 Fragaria x ananassa HOM05D010931 ORTHO05D013603 1.4e-08 64.7 299 25.4
FAN28G1502 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-08 64.7 108 37.0
Lj2g0009806 Lotus japonicus HOM05D006368 ORTHO05D006739 1.4e-08 64.7 314 25.2
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 1.8e-08 64.3 115 38.3
Medtr7g069840 Medicago truncatula HOM05D010147 ORTHO05D006739 1.8e-08 64.3 296 25.0
Ca_07672_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.4e-08 63.9 291 24.7
FAN09G0606 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-08 63.9 135 34.1
FAN04G1211 Fragaria x ananassa HOM05D010931 ORTHO05D013603 3.1e-08 63.5 303 25.4
Lj2P518T28 Lonicera japonica HOM05D000151 ORTHO05D000074 7.0e-08 62.4 253 25.7
QL09p049374 Quercus lobata HOM05D000151 ORTHO05D000074 1.6e-07 61.2 260 25.8
Lj2P451T33 Lonicera japonica HOM05D000151 ORTHO05D000074 2.7e-07 60.5 314 24.8
Potri.006G015601 Populus trichocarpa HOM05D000151 ORTHO05D000074 3.5e-07 60.1 234 26.1
Lj2P486T20 Lonicera japonica HOM05D000151 ORTHO05D000074 7.7e-07 58.9 244 26.6
Actinidia25882 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.0e-06 58.5 292 25.7
CiPaw.06G077200 Carya illinoinensis HOM05D000151 ORTHO05D000074 1.0e-06 58.5 345 20.9
Dinv35548 Davidia involucrata HOM05D000151 ORTHO05D000074 1.0e-06 58.5 286 25.2
Dinv40803 Davidia involucrata HOM05D000151 ORTHO05D000074 1.0e-06 58.5 303 24.1
Peaxi162Scf00119g00124 Petunia axillaris HOM05D000151 ORTHO05D000074 1.0e-06 58.5 328 22.3
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-06 58.5 236 23.7
Aqoxy4G01125 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.3e-06 58.2 285 26.7
Aqoxy7G02698 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.7e-06 57.8 314 24.2
Lj2P476T13 Lonicera japonica HOM05D000151 ORTHO05D000074 1.7e-06 57.8 256 25.8
CiPaw.06G046500 Carya illinoinensis HOM05D000151 ORTHO05D000074 2.3e-06 57.4 346 20.5
FAN14G0447 Fragaria x ananassa HOM05D011252 ORTHO05D029353 2.9e-06 57.0 329 25.2
Nitab4.5_0000025g0120 Nicotiana tabacum HOM05D000151 ORTHO05D000074 3.8e-06 56.6 280 22.1
FvH4_6g16960 Fragaria vesca HOM05D011252 ORTHO05D029353 5.0e-06 56.2 329 25.2
FAN05G0554 Fragaria x ananassa HOM05D005035 ORTHO05D006141 5.0e-06 56.2 106 36.8
TWI56G0068 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 6.5e-06 55.8 279 25.4
TAR626G1713 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.5e-06 55.8 277 22.7
Nitab4.5_0003259g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 8.6e-06 55.5 280 22.9


User provided reference genes

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