Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g36610 Fragaria vesca HOM05D005772 ORTHO05D006468 2.9e-91 338.6 176 100.0
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.6e-87 325.5 173 97.1
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 3.7e-86 321.6 173 96.5
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 3.6e-81 305.1 173 91.3
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 2.2e-75 285.8 173 86.1
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 1.2e-65 253.4 147 89.8
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 1.0e-59 233.8 173 71.1
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 1.1e-58 230.3 173 67.6
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 3.1e-40 169.1 180 56.1
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 5.8e-39 164.9 172 55.8
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 7.5e-39 164.5 173 55.5
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 2.9e-38 162.5 172 54.1
Haze_16205 Corylus avellana HOM05D005772 ORTHO05D006468 1.1e-37 160.6 162 55.6
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 3.5e-36 155.6 173 53.8
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 4.6e-36 155.2 173 53.2
MD04G1024400 Malus domestica HOM05D005772 ORTHO05D006468 3.3e-34 149.1 111 69.4
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 1.2e-33 147.1 174 54.0
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 2.8e-33 146.0 175 50.3
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.1e-32 144.1 175 50.9
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 1.1e-32 144.1 174 50.6
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 3.2e-29 132.5 178 48.9
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.0e-27 125.9 173 49.1
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.0e-27 125.9 173 49.1
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 1.1e-26 124.0 178 45.5
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 1.1e-26 124.0 176 46.0
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 5.6e-26 121.7 183 45.4
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 5.6e-26 121.7 184 45.7
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 9.6e-26 120.9 174 48.3
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.2e-25 120.6 173 48.6
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 1.2e-25 120.6 171 46.2
QL06p047014 Quercus lobata HOM05D001071 ORTHO05D006468 6.2e-25 118.2 138 52.9
Eucgr.A00749 Eucalyptus grandis HOM05D005772 ORTHO05D006468 8.1e-25 117.9 179 49.7
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 4.0e-24 115.5 169 46.7
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 4.0e-24 115.5 171 45.0
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 6.9e-24 114.8 152 47.4
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 1.1e-21 107.5 145 43.4
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 3.2e-21 105.9 59 78.0
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 9.3e-21 104.4 181 43.6
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 1.6e-20 103.6 97 57.7
Atru.chr1.2602 Acer truncatum HOM05D005772 ORTHO05D006468 2.1e-20 103.2 155 45.2
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 1.0e-19 100.9 119 48.7
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 5.1e-19 98.6 81 59.3
Dinv20324 Davidia involucrata HOM05D005772 ORTHO05D006468 1.6e-17 93.6 141 46.1
Duzib192G0394 Durio zibethinus HOM05D005772 ORTHO05D006468 4.8e-17 92.0 92 51.1
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 4.8e-17 92.0 172 42.4
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 1.1e-16 90.9 175 41.7
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 6.9e-16 88.2 171 38.6
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 1.7e-14 83.6 157 40.1
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 6.4e-14 81.6 169 37.9
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 6.4e-14 81.6 154 39.6
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.1e-13 80.9 159 40.3
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 4.2e-13 79.0 154 39.0
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 5.4e-13 78.6 154 39.0
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 5.4e-13 78.6 169 42.0
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 4.6e-12 75.5 168 39.3
ATR0618G111 Amborella trichopoda HOM05D005772 ORTHO05D006468 3.0e-11 72.8 116 43.1
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 3.0e-11 72.8 173 39.9
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 3.9e-11 72.4 154 37.0
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 3.9e-11 72.4 154 37.0
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 1.5e-10 70.5 138 35.5
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 2.5e-10 69.7 160 34.4
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 9.6e-10 67.8 134 38.8
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 2.1e-09 66.6 176 34.7
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 2.8e-09 66.2 182 34.1
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 2.8e-09 66.2 176 36.4
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 4.8e-09 65.5 142 37.3
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 4.8e-09 65.5 174 40.2
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 1.8e-08 63.5 77 45.5
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 4.0e-08 62.4 163 32.5
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 1.5e-07 60.5 182 33.0
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 2.0e-07 60.1 170 35.3
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 5.8e-07 58.5 170 35.3
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 1.3e-06 57.4 113 39.8
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.2e-06 56.6 139 34.5
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 4.9e-06 55.5 169 36.7


User provided reference genes

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