Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g33182 Fragaria vesca HOM05D000459 ORTHO05D029433 1.0e-31 139.4 71 100.0
FvH4_4g33530 Fragaria vesca HOM05D000459 ORTHO05D000798 3.4e-22 107.8 70 84.3
FvH4_5g19942 Fragaria vesca HOM05D000459 ORTHO05D029433 4.4e-22 107.5 70 82.9
FAN17G0890 Fragaria x ananassa HOM05D000459 ORTHO05D000798 4.4e-22 107.5 70 84.3
FAN12G4292 Fragaria x ananassa HOM05D000459 ORTHO05D000798 1.7e-21 105.5 70 82.9
FAN22G0958 Fragaria x ananassa HOM05D000459 ORTHO05D000798 1.7e-21 105.5 70 82.9
FAN07G0922 Fragaria x ananassa HOM05D000459 ORTHO05D000798 2.4e-20 101.7 66 83.3
Prupe.1G333500 Prunus persica HOM05D000459 ORTHO05D000798 6.2e-16 87.0 76 71.1
FvH4_5g33222 Fragaria vesca HOM05D043138 ORTHO05D029433 2.3e-15 85.1 122 48.4
MD16G1018400 Malus domestica HOM05D000459 ORTHO05D000798 2.6e-14 81.6 67 70.1
RcHm_v2.0_Chr4g0443041 Rosa chinensis HOM05D000459 ORTHO05D000798 4.4e-14 80.9 78 67.9
MD13G1020200 Malus domestica HOM05D000459 ORTHO05D000798 1.3e-13 79.3 67 68.7
Dinv10474 Davidia involucrata HOM05D000459 ORTHO05D000798 5.1e-10 67.4 62 61.3
Lj6C738G3 Lonicera japonica HOM05D001486 ORTHO05D007504 1.5e-09 65.9 66 59.1
CANSAT01G2064 Cannabis sativa HOM05D000459 ORTHO05D000798 5.6e-09 63.9 70 57.1
Dinv07727 Davidia involucrata HOM05D000459 ORTHO05D000798 5.6e-09 63.9 62 62.9
Haze_10878 Corylus avellana HOM05D000459 ORTHO05D000798 1.6e-08 62.4 62 59.7
Ah.02g128000 Amaranthus hybridus HOM05D000459 ORTHO05D000798 3.6e-08 61.2 67 53.7
QL03p035915 Quercus lobata HOM05D000459 ORTHO05D000798 4.7e-08 60.8 59 59.3
vmacro10694 Vaccinium macrocarpon HOM05D000459 ORTHO05D000798 4.7e-08 60.8 67 56.7
Cfa015024 Carpinus fangiana HOM05D000459 ORTHO05D000798 6.2e-08 60.5 65 55.4
Manes.17G084001 Manihot esculenta HOM05D002001 ORTHO05D006833 1.1e-07 59.7 40 75.0
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 1.8e-07 58.9 36 86.1
HanXRQChr15g0476721 Helianthus annuus HOM05D000459 ORTHO05D000798 1.8e-07 58.9 70 51.4
TAR629G2712 Trochodendron aralioides HOM05D000459 ORTHO05D000798 1.8e-07 58.9 46 69.6
Actinidia12395 Actinidia chinensis HOM05D000459 ORTHO05D000798 2.4e-07 58.5 66 56.1
TWI77G0362 Tripterygium wilfordii HOM05D000459 ORTHO05D000798 3.1e-07 58.2 68 57.4
AUR62014252 Chenopodium quinoa HOM05D000459 ORTHO05D000798 4.0e-07 57.8 67 52.2
AUR62038475 Chenopodium quinoa HOM05D000459 ORTHO05D000798 4.0e-07 57.8 67 52.2
Atru.chr11.921 Acer truncatum HOM05D000459 ORTHO05D000798 5.2e-07 57.4 72 52.8
Cpa.g.sc2.192 Carica papaya HOM05D000459 ORTHO05D000798 5.2e-07 57.4 65 53.8
TWI74G1639 Tripterygium wilfordii HOM05D002001 ORTHO05D006833 5.2e-07 57.4 71 56.3
Hund24933 Selenicereus undatus HOM05D000459 ORTHO05D000798 6.8e-07 57.0 67 46.3
EL10Ac6g14198 Beta vulgaris HOM05D000459 ORTHO05D000798 8.9e-07 56.6 67 50.7
Eucgr.G02105 Eucalyptus grandis HOM05D000459 ORTHO05D000798 8.9e-07 56.6 58 56.9
Lsat_1_v5_gn_3_53501 Lactuca sativa HOM05D000459 ORTHO05D000798 8.9e-07 56.6 65 56.9
Manes.15G134300 Manihot esculenta HOM05D000459 ORTHO05D000798 8.9e-07 56.6 69 56.5
THA.LOC104809792 Tarenaya hassleriana HOM05D000459 ORTHO05D000798 1.2e-06 56.2 73 50.7
Thecc.02G292700 Theobroma cacao HOM05D000459 ORTHO05D000798 2.6e-06 55.1 75 52.0
Actinidia36626 Actinidia chinensis HOM05D000459 ORTHO05D000798 3.4e-06 54.7 63 55.6
arahy.Tifrunner.gnm1.ann1.MVKV3L Arachis hypogaea HOM05D000459 ORTHO05D000798 3.4e-06 54.7 48 64.6
Potri.008G134900 Populus trichocarpa HOM05D000459 ORTHO05D000798 3.4e-06 54.7 40 72.5
Potri.010G106300 Populus trichocarpa HOM05D000459 ORTHO05D000798 4.4e-06 54.3 59 61.0
Sabra10G0077700 Salix brachista HOM05D000459 ORTHO05D000798 4.4e-06 54.3 59 57.6
arahy.Tifrunner.gnm1.ann1.5LD4S6 Arachis hypogaea HOM05D000459 ORTHO05D000798 5.8e-06 53.9 70 52.9
Hma1.2p1_0277F.1_g111680 Hydrangea macrophylla HOM05D000459 ORTHO05D000798 5.8e-06 53.9 67 49.3


User provided reference genes

Program Settings