Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 8.1e-127 457.2 254 100.0
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.0e-125 452.6 255 99.6
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 7.6e-125 450.7 255 99.2
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.6e-119 433.0 245 98.8
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.7e-116 422.9 246 96.7
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.1e-106 389.4 248 92.3
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 2.0e-96 356.3 246 84.1
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 3.4e-93 345.5 252 79.0
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 6.7e-89 331.3 251 77.3
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 2.0e-85 319.7 249 72.3
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 3.2e-83 312.4 255 72.5
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 4.2e-83 312.0 255 72.5
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 5.5e-83 311.6 254 74.0
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 1.2e-82 310.5 255 71.8
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 2.7e-82 309.3 247 72.1
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 1.8e-81 306.6 249 71.5
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.2e-81 305.1 260 64.2
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 5.2e-81 305.1 249 69.5
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 8.8e-81 304.3 249 71.1
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.5e-80 303.5 261 67.4
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 1.5e-80 303.5 251 70.1
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 2.6e-80 302.8 249 70.3
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 4.4e-80 302.0 249 68.7
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 5.7e-80 301.6 243 73.7
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 5.7e-80 301.6 253 71.5
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 3.1e-78 295.8 259 64.9
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 4.1e-78 295.4 250 68.0
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 7.0e-78 294.7 255 62.7
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 2.0e-77 293.1 250 64.4
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 3.5e-77 292.4 249 68.3
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 5.9e-77 291.6 253 68.4
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 5.9e-77 291.6 254 68.9
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 7.7e-77 291.2 253 64.4
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 1.0e-76 290.8 249 67.9
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.3e-76 290.4 255 62.4
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 2.2e-76 289.7 268 64.2
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 2.2e-76 289.7 254 66.1
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 2.9e-76 289.3 248 68.1
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 3.8e-76 288.9 250 68.8
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 3.8e-76 288.9 258 67.8
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 3.8e-76 288.9 249 67.9
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 5.0e-76 288.5 259 59.8
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 6.5e-76 288.1 249 67.5
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 8.5e-76 287.7 250 67.6
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 8.5e-76 287.7 250 67.6
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 8.5e-76 287.7 250 60.8
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 1.1e-75 287.3 247 67.6
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 1.5e-75 287.0 250 68.0
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.5e-75 287.0 250 67.6
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 2.5e-75 286.2 261 67.4
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 2.5e-75 286.2 249 67.1
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 5.5e-75 285.0 253 68.8
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 9.4e-75 284.3 243 65.0
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 1.2e-74 283.9 243 65.0
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 1.2e-74 283.9 254 65.7
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 1.6e-74 283.5 257 64.2
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 1.8e-73 280.0 254 67.3
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 3.0e-73 279.3 243 64.2
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 5.2e-73 278.5 242 70.2
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 6.8e-73 278.1 249 66.3
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 1.2e-72 277.3 254 63.4
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.5e-72 276.9 249 65.9
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 3.4e-72 275.8 279 59.9
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 4.8e-71 271.9 250 62.4
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.3e-71 271.2 260 63.5
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 1.6e-69 266.9 153 92.8
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 2.0e-69 266.5 255 64.3
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 4.5e-69 265.4 246 63.8
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 3.8e-68 262.3 256 57.8
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 5.5e-67 258.5 268 57.5
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 4.7e-66 255.4 252 62.3
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.4e-65 253.8 222 62.6
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 5.2e-65 251.9 245 60.8
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 6.8e-65 251.5 260 60.4
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.5e-64 250.4 250 66.0
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 3.4e-64 249.2 250 57.2
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 7.5e-64 248.1 248 58.5
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 8.3e-63 244.6 220 64.5
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 2.0e-61 240.0 244 61.5
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 2.0e-61 240.0 245 59.2
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 1.0e-60 237.7 246 58.9
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 4.3e-59 232.3 195 66.7
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 2.8e-58 229.6 247 56.7
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 6.1e-58 228.4 248 57.3
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 1.4e-57 227.3 188 65.4
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 2.3e-57 226.5 251 57.0
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 6.8e-57 224.9 221 64.3
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 2.6e-56 223.0 242 57.0
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 4.4e-56 222.2 250 55.2
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 5.7e-56 221.9 193 61.1
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 7.5e-56 221.5 231 60.6
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.2e-55 219.9 250 50.8
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.4e-54 216.5 257 51.0
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 1.2e-53 214.2 205 62.4
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 1.2e-53 214.2 251 55.8
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 2.0e-53 213.4 180 62.8
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 2.0e-53 213.4 241 56.4
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 3.0e-52 209.5 245 54.7
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 3.2e-46 189.5 256 44.9
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.5e-45 186.0 153 69.9
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 1.5e-43 180.6 252 43.7
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 8.9e-41 171.4 249 48.6
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.2e-39 166.8 151 59.6
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 6.4e-39 165.2 161 64.6
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 7.1e-38 161.8 259 39.8
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.5e-35 153.3 142 58.5
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 2.6e-32 143.3 271 41.0
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 4.6e-29 132.5 267 37.1
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.5e-27 126.7 221 41.6
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.5e-27 126.7 95 71.6
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.5e-27 126.7 95 71.6
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 8.4e-23 111.7 236 38.1
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 2.7e-21 106.7 159 43.4
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 2.1e-18 97.1 185 38.9
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 4.8e-18 95.9 133 45.9
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 1.5e-16 90.9 340 26.2
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 1.3e-12 77.8 45 75.6
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 3.4e-08 63.2 57 56.1
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 5.8e-08 62.4 107 43.0
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 4.9e-07 59.3 112 40.2
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 1.9e-06 57.4 86 40.7


User provided reference genes

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