Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g22011 Fragaria vesca HOM05D003258 ORTHO05D010059 2.1e-222 775.4 388 100.0
FvH4_6g39110 Fragaria vesca HOM05D003258 ORTHO05D010103 1.7e-221 772.3 387 99.5
FvH4_3g25201 Fragaria vesca HOM05D003258 ORTHO05D010059 3.9e-221 771.2 387 99.5
FvH4_4g04830 Fragaria vesca HOM05D003258 ORTHO05D010103 1.1e-220 769.6 387 99.5
FAN01G2108 Fragaria x ananassa HOM05D003258 ORTHO05D010059 3.5e-190 668.3 389 85.1
FvH4_3g29860 Fragaria vesca HOM05D003258 ORTHO05D010059 8.8e-157 557.4 387 78.3
FAN28G2103 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.2e-137 493.8 378 71.2
FAN15G1112 Fragaria x ananassa HOM05D003258 ORTHO05D010059 7.5e-132 474.6 278 84.9
FAN22G2330 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.7e-123 446.8 297 78.1
FvH4_6g36690 Fragaria vesca HOM05D003258 ORTHO05D010059 8.1e-118 427.9 255 84.7
FvH4_6g36740 Fragaria vesca HOM05D003258 ORTHO05D010059 1.5e-116 423.7 209 99.5
FvH4_7g04250 Fragaria vesca HOM05D003258 ORTHO05D010059 3.8e-107 392.5 193 99.0
FAN12G4238 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.6e-100 369.8 270 71.9
FAN09G1912 Fragaria x ananassa HOM05D003258 ORTHO05D010059 7.6e-100 368.2 258 74.8
FAN05G2576 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.7e-99 367.1 228 83.3
FvH4_5g33260 Fragaria vesca HOM05D003258 ORTHO05D010103 3.2e-90 336.3 172 99.4
FvH4_7g32820 Fragaria vesca HOM05D003258 ORTHO05D010103 7.1e-90 335.1 172 98.8
FAN05G3167 Fragaria x ananassa HOM05D003258 ORTHO05D010103 7.1e-90 335.1 193 87.0
FvH4_4g09880 Fragaria vesca HOM05D003258 ORTHO05D010103 9.3e-90 334.7 172 98.8
FAN25G0608 Fragaria x ananassa HOM05D003258 ORTHO05D010103 6.2e-86 322.0 218 78.0
FAN05G3390 Fragaria x ananassa HOM05D003258 ORTHO05D010059 6.9e-85 318.5 226 71.7
FAN25G3312 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.7e-83 313.9 197 78.7
FvH4_4g10502 Fragaria vesca HOM05D003258 ORTHO05D010059 2.7e-81 306.6 156 92.3
FAN09G3383 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.7e-81 306.6 165 86.7
FvH4_3g24490 Fragaria vesca HOM05D003258 ORTHO05D010059 6.9e-77 292.0 143 99.3
FvH4_3g33780 Fragaria vesca HOM05D003258 ORTHO05D010059 6.9e-77 292.0 143 99.3
FvH4_4g09870 Fragaria vesca HOM05D003258 ORTHO05D010059 6.9e-77 292.0 143 99.3
FvH4_7g04380 Fragaria vesca HOM05D003258 ORTHO05D010059 6.9e-77 292.0 143 99.3
FvH4_6g34231 Fragaria vesca HOM05D003258 ORTHO05D010103 4.5e-76 289.3 173 87.3
FAN23G2411 Fragaria x ananassa HOM05D003258 ORTHO05D010059 5.8e-76 288.9 200 71.5
FAN13G2348 Fragaria x ananassa HOM05D003258 ORTHO05D010059 6.5e-75 285.4 193 74.1
FvH4_7g09690 Fragaria vesca HOM05D003258 ORTHO05D010059 4.2e-74 282.7 193 77.2
FAN05G0505 Fragaria x ananassa HOM05D003258 ORTHO05D010103 5.5e-74 282.3 174 82.8
FAN28G0033 Fragaria x ananassa HOM05D003258 ORTHO05D010059 3.3e-71 273.1 395 45.8
FAN28G2352 Fragaria x ananassa HOM05D003258 ORTHO05D010103 3.4e-68 263.1 167 82.6
FAN03G0862 Fragaria x ananassa HOM05D003258 ORTHO05D010103 5.9e-68 262.3 163 84.7
FAN02G3671 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.4e-66 257.7 388 43.6
FAN04G3025 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.7e-65 253.4 144 84.0
FAN17G0200 Fragaria x ananassa HOM05D003258 ORTHO05D010059 3.6e-65 253.1 388 44.6
FAN01G2071 Fragaria x ananassa HOM05D003258 ORTHO05D198837 2.5e-63 246.9 162 84.0
FAN03G1737 Fragaria x ananassa HOM05D003258 ORTHO05D207174 2.5e-63 246.9 162 84.0
FAN03G3037 Fragaria x ananassa HOM05D003901 ORTHO05D004511 1.7e-62 244.2 184 68.5
FAN28G2030 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.2e-60 238.0 147 84.4
FAN28G2454 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.5e-60 237.7 173 72.8
FvH4_4g16800 Fragaria vesca HOM05D003258 ORTHO05D010059 3.4e-60 236.5 119 98.3
FvH4_6g06051 Fragaria vesca HOM05D003258 ORTHO05D010059 2.0e-55 220.7 290 45.9
FAN04G0575 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.1e-53 214.9 174 68.4
FAN28G2880 Fragaria x ananassa HOM05D003258 ORTHO05D010059 4.5e-52 209.5 158 69.0
FAN07G1758 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.3e-51 208.0 150 66.7
FAN15G1721 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.9e-51 206.8 202 58.9
FAN20G1149 Fragaria x ananassa HOM05D003258 ORTHO05D010103 9.4e-50 201.8 146 76.0
FAN05G2980 Fragaria x ananassa HOM05D003258 ORTHO05D010059 8.8e-48 195.3 98 89.8
FAN03G3282 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.0e-47 194.1 106 85.8
FAN28G2285 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.6e-47 193.7 193 60.1
FvH4_7g32810 Fragaria vesca HOM05D003258 ORTHO05D010059 3.7e-46 189.9 95 98.9
FAN27G1795 Fragaria x ananassa HOM05D003258 ORTHO05D198896 1.2e-44 184.9 153 69.3
FAN05G0310 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.6e-44 184.5 163 63.2
FAN26G0731 Fragaria x ananassa HOM05D003258 ORTHO05D208201 3.8e-43 179.9 128 76.6
FAN23G2668 Fragaria x ananassa HOM05D003258 ORTHO05D010059 5.0e-43 179.5 127 74.0
FvH4_4g04910 Fragaria vesca HOM05D003258 ORTHO05D010103 6.5e-43 179.1 106 89.6
FAN01G2001 Fragaria x ananassa HOM05D003258 ORTHO05D203895 8.5e-43 178.7 152 68.4
FAN13G3034 Fragaria x ananassa HOM05D003258 ORTHO05D010103 9.4e-42 175.3 170 61.2
FAN27G1296 Fragaria x ananassa HOM05D003258 ORTHO05D209479 9.4e-42 175.3 138 71.7
FAN20G0441 Fragaria x ananassa HOM05D003258 ORTHO05D010059 4.4e-39 166.4 210 49.0
FAN28G0006 Fragaria x ananassa HOM05D003258 ORTHO05D202578 5.7e-39 166.0 234 45.7
FAN26G0625 Fragaria x ananassa HOM05D003258 ORTHO05D010059 5.9e-36 156.0 82 85.4
FAN05G4242 Fragaria x ananassa HOM05D003258 ORTHO05D010059 5.0e-35 152.9 95 78.9
FAN27G1946 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.5e-34 150.6 127 62.2
FAN15G1329 Fragaria x ananassa HOM05D003258 ORTHO05D210817 5.5e-34 149.4 111 74.8
FvH4_4g16810 Fragaria vesca HOM05D003258 ORTHO05D010103 2.7e-33 147.1 73 100.0
FAN05G4506 Fragaria x ananassa HOM05D003258 ORTHO05D209888 2.0e-31 141.0 83 89.2
FAN09G1361 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.4e-29 134.0 86 77.9
FAN15G0596 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.2e-28 131.7 75 86.7
FAN09G0027 Fragaria x ananassa HOM05D003258 ORTHO05D010103 7.7e-28 129.0 70 94.3
FAN28G2144 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.2e-25 121.7 71 78.9
FAN03G0136 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.6e-25 121.3 121 55.4
FAN12G2034 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.8e-25 120.6 62 93.5
RcHm_v2.0_Chr1g0358931 Rosa chinensis HOM05D003258 ORTHO05D010059 1.7e-22 111.3 137 40.9
FAN05G5586 Fragaria x ananassa HOM05D003258 ORTHO05D010059 3.7e-22 110.2 67 85.1
FAN11G1402 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.1e-21 108.6 77 70.1
FAN12G1699 Fragaria x ananassa HOM05D003258 ORTHO05D010059 3.2e-21 107.1 85 67.1
FAN03G0422 Fragaria x ananassa HOM05D003258 ORTHO05D010059 5.4e-21 106.3 67 80.6
FAN05G2649 Fragaria x ananassa HOM05D003258 ORTHO05D010059 9.2e-21 105.5 68 79.4
FAN15G0709 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.6e-20 104.8 88 63.6
FAN22G1796 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.7e-19 101.3 167 41.3
FAN27G2599 Fragaria x ananassa HOM05D003258 ORTHO05D010059 5.0e-19 99.8 76 65.8
FAN03G2905 Fragaria x ananassa HOM05D003258 ORTHO05D199192 3.3e-18 97.1 57 86.0
FAN02G3823 Fragaria x ananassa HOM05D003258 ORTHO05D010103 8.0e-17 92.4 64 79.7
FAN26G3376 Fragaria x ananassa HOM05D003258 ORTHO05D010059 3.1e-16 90.5 58 77.6
FAN11G2264 Fragaria x ananassa HOM05D003258 ORTHO05D010059 8.9e-16 89.0 215 33.0
FAN28G2675 Fragaria x ananassa HOM05D003258 ORTHO05D010059 4.9e-14 83.2 49 79.6
FAN16G2001 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.9e-13 81.3 51 74.5
FAN25G2622 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.4e-13 80.9 80 57.5
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 5.0e-11 73.2 244 23.8
RcHm_v2.0_Chr4g0402241 Rosa chinensis HOM05D003258 ORTHO05D010059 5.0e-11 73.2 67 55.2
FAN27G1640 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.1e-10 72.0 51 72.5
FAN27G1716 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.5e-10 71.6 40 80.0
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 1.5e-10 71.6 244 23.4
FAN28G1498 Fragaria x ananassa HOM05D003258 ORTHO05D210012 1.9e-10 71.2 131 44.3
FAN23G2563 Fragaria x ananassa HOM05D003258 ORTHO05D010059 5.6e-10 69.7 40 77.5
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 7.3e-10 69.3 241 23.2
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 1.1e-08 65.5 386 22.3
FAN07G1106 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.4e-08 65.1 50 56.0
FAN12G2361 Fragaria x ananassa HOM05D003258 ORTHO05D010059 6.8e-08 62.8 76 47.4
FAN28G1001 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.6e-07 60.8 34 88.2
FAN16G0796 Fragaria x ananassa HOM05D003258 ORTHO05D010059 1.3e-06 58.5 40 70.0
RcHm_v2.0_Chr6g0298971 Rosa chinensis HOM05D003258 ORTHO05D010059 6.4e-06 56.2 57 47.4


User provided reference genes

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