Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g19980 Fragaria vesca HOM05D007761 ORTHO05D035530 2.2e-108 395.6 189 100.0
FAN14G5498 Fragaria x ananassa HOM05D001557 ORTHO05D001299 1.9e-104 382.5 187 97.3
FAN09G0722 Fragaria x ananassa HOM05D007761 ORTHO05D011461 2.5e-64 249.2 181 70.2
FAN20G0086 Fragaria x ananassa HOM05D007761 ORTHO05D035530 1.2e-61 240.4 218 61.0
FAN04G2389 Fragaria x ananassa HOM05D007761 ORTHO05D011461 7.8e-58 227.6 179 65.9
FAN26G3186 Fragaria x ananassa HOM05D007761 ORTHO05D035530 4.1e-51 205.3 121 81.0
FvH4_3g22940 Fragaria vesca HOM05D007761 ORTHO05D001299 3.0e-33 146.0 91 74.7
FAN05G3475 Fragaria x ananassa HOM05D007761 ORTHO05D011461 8.4e-28 127.9 102 65.7
FAN27G1171 Fragaria x ananassa HOM05D007761 ORTHO05D011083 5.8e-21 105.1 189 36.5
FAN05G4547 Fragaria x ananassa HOM05D007761 ORTHO05D001299 1.7e-20 103.6 62 75.8
FAN01G0683 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.2e-19 99.4 65 72.3
FAN06G3287 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.2e-19 99.4 65 72.3
FAN12G0192 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.2e-19 99.4 65 72.3
FAN10G3275 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.6e-18 97.1 65 70.8
FAN15G1618 Fragaria x ananassa HOM05D007761 ORTHO05D011461 2.7e-18 96.3 181 37.0
FAN27G1253 Fragaria x ananassa HOM05D007761 ORTHO05D011461 4.6e-18 95.5 190 37.4
FAN22G1235 Fragaria x ananassa HOM05D007761 ORTHO05D011461 7.9e-18 94.7 81 56.8
FAN16G1949 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.3e-17 94.0 100 52.0
FAN19G1460 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.3e-17 94.0 100 53.0
FAN01G0429 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.8e-17 93.6 99 51.5
FAN27G0095 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.8e-17 93.6 99 51.5
FAN25G1610 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.9e-17 92.4 50 80.0
FAN14G1493 Fragaria x ananassa HOM05D001253 ORTHO05D001086 5.1e-17 92.0 48 81.2
FAN16G3080 Fragaria x ananassa HOM05D007761 ORTHO05D000537 5.1e-17 92.0 193 36.3
FAN04G2478 Fragaria x ananassa HOM05D007761 ORTHO05D011461 6.7e-17 91.7 190 37.9
FAN05G5109 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.5e-16 90.5 100 51.0
FAN07G1261 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.5e-16 90.5 185 35.7
FAN03G0276 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.3e-16 89.4 99 50.5
FAN27G3291 Fragaria x ananassa HOM05D007761 ORTHO05D003203 1.6e-15 87.0 104 45.2
FAN08G3144 Fragaria x ananassa HOM05D007761 ORTHO05D011461 4.0e-14 82.4 109 47.7
FAN24G0486 Fragaria x ananassa HOM05D007761 ORTHO05D011461 6.9e-14 81.6 63 61.9
FAN01G1911 Fragaria x ananassa HOM05D007761 ORTHO05D001299 7.6e-13 78.2 48 68.8
FvH4_4g03360 Fragaria vesca HOM05D007761 ORTHO05D004145 2.2e-12 76.6 87 48.3
FAN22G1122 Fragaria x ananassa HOM05D007761 ORTHO05D011461 2.2e-12 76.6 50 64.0
FAN24G1835 Fragaria x ananassa HOM05D018529 ORTHO05D016305 3.8e-12 75.9 47 66.0
FAN14G0624 Fragaria x ananassa HOM05D007761 ORTHO05D011461 1.9e-11 73.6 43 74.4
FAN26G0058 Fragaria x ananassa HOM05D007761 ORTHO05D210449 3.2e-11 72.8 53 58.5
FAN24G2462 Fragaria x ananassa HOM05D018529 ORTHO05D016305 7.1e-11 71.6 47 63.8
FAN02G0387 Fragaria x ananassa HOM05D007761 ORTHO05D011083 2.1e-10 70.1 79 53.2
RcHm_v2.0_Chr1g0346381 Rosa chinensis HOM05D007741 ORTHO05D016318 3.5e-10 69.3 230 30.4
FAN05G4712 Fragaria x ananassa HOM05D007761 ORTHO05D022710 4.6e-10 68.9 69 52.2
FAN22G2224 Fragaria x ananassa HOM05D007761 ORTHO05D001299 6.1e-10 68.6 50 60.0
FAN15G2924 Fragaria x ananassa HOM05D007761 ORTHO05D001299 2.3e-09 66.6 42 61.9
RcHm_v2.0_Chr1g0339901 Rosa chinensis HOM05D007741 ORTHO05D016318 2.3e-09 66.6 246 29.7
FAN27G2198 Fragaria x ananassa HOM05D007761 ORTHO05D205366 5.1e-09 65.5 76 51.3
RcHm_v2.0_Chr1g0351211 Rosa chinensis HOM05D007741 ORTHO05D015647 5.1e-09 65.5 125 37.6
RcHm_v2.0_Chr4g0422711 Rosa chinensis HOM05D007741 ORTHO05D011461 6.7e-09 65.1 49 61.2
FvH4_5g31890 Fragaria vesca HOM05D006059 ORTHO05D019147 8.7e-09 64.7 38 65.8
FAN03G1355 Fragaria x ananassa HOM05D000713 ORTHO05D000547 8.7e-09 64.7 83 41.0
RcHm_v2.0_Chr2g0119361 Rosa chinensis HOM05D007741 ORTHO05D016318 1.1e-08 64.3 231 29.4
FAN11G0210 Fragaria x ananassa HOM05D038588 ORTHO05D045961 1.5e-08 63.9 56 57.1
FAN28G1246 Fragaria x ananassa HOM05D007761 ORTHO05D202161 1.5e-08 63.9 48 62.5
RcHm_v2.0_Chr3g0447381 Rosa chinensis HOM05D007761 ORTHO05D022710 1.5e-08 63.9 47 61.7
RcHm_v2.0_Chr4g0423141 Rosa chinensis HOM05D007741 ORTHO05D016318 1.9e-08 63.5 231 29.0
RcHm_v2.0_Chr6g0279711 Rosa chinensis HOM05D007741 ORTHO05D016318 1.9e-08 63.5 231 29.0
FAN08G0278 Fragaria x ananassa HOM05D007761 ORTHO05D011461 3.3e-08 62.8 47 59.6
FAN12G3955 Fragaria x ananassa HOM05D007761 ORTHO05D015647 3.3e-08 62.8 46 60.9
FAN05G3071 Fragaria x ananassa HOM05D007761 ORTHO05D209680 7.4e-08 61.6 44 61.4
FAN13G0088 Fragaria x ananassa HOM05D002366 ORTHO05D002499 7.4e-08 61.6 43 62.8
FAN25G1796 Fragaria x ananassa HOM05D007761 ORTHO05D045668 1.3e-07 60.8 55 52.7
FAN21G0448 Fragaria x ananassa HOM05D007761 ORTHO05D015647 2.2e-07 60.1 48 62.5
FAN03G0027 Fragaria x ananassa HOM05D060314 ORTHO05D022710 2.8e-07 59.7 83 44.6
FAN05G2318 Fragaria x ananassa HOM05D008445 ORTHO05D022710 2.8e-07 59.7 40 62.5
FAN18G1962 Fragaria x ananassa HOM05D007761 ORTHO05D204436 2.8e-07 59.7 117 38.5
FAN11G2655 Fragaria x ananassa HOM05D022094 ORTHO05D202872 3.7e-07 59.3 101 39.6
FAN18G4536 Fragaria x ananassa HOM05D007761 ORTHO05D015647 3.7e-07 59.3 101 40.6
RcHm_v2.0_Chr1g0367541 Rosa chinensis HOM05D007741 ORTHO05D011083 3.7e-07 59.3 56 48.2
FAN11G1752 Fragaria x ananassa HOM05D007741 ORTHO05D204122 6.3e-07 58.5 52 55.8
FAN21G0972 Fragaria x ananassa HOM05D007761 ORTHO05D202729 8.2e-07 58.2 42 57.1
FAN12G3425 Fragaria x ananassa HOM05D008445 ORTHO05D011083 1.1e-06 57.8 42 57.1
FAN23G1385 Fragaria x ananassa HOM05D015953 ORTHO05D019200 1.1e-06 57.8 104 36.5
RcHm_v2.0_Chr5g0050261 Rosa chinensis HOM05D007741 ORTHO05D014215 1.8e-06 57.0 127 32.3
FAN09G4565 Fragaria x ananassa HOM05D007761 ORTHO05D015647 3.1e-06 56.2 101 40.6
RcHm_v2.0_Chr6g0280951 Rosa chinensis HOM05D007761 ORTHO05D011461 5.3e-06 55.5 65 52.3
FvH4_6g16421 Fragaria vesca HOM05D000030 ORTHO05D000009 6.9e-06 55.1 26 88.5
FAN16G2345 Fragaria x ananassa HOM05D007761 ORTHO05D022710 6.9e-06 55.1 54 57.4
FAN05G0127 Fragaria x ananassa HOM05D007761 ORTHO05D202173 9.0e-06 54.7 30 73.3


User provided reference genes

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