Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g08250 Fragaria vesca HOM05D000003 ORTHO05D006737 9.0e-53 209.9 101 100.0
FAN14G2822 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.5e-52 207.6 101 99.0
FvH4_3g25361 Fragaria vesca HOM05D000003 ORTHO05D006737 7.1e-42 173.7 96 87.5
FAN14G5848 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.2e-41 172.9 95 86.3
FAN20G2266 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.4e-36 154.8 94 76.6
FAN18G0759 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.2e-34 147.9 81 87.7
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 2.1e-33 145.6 94 69.1
FvH4_4g10782 Fragaria vesca HOM05D000003 ORTHO05D006737 6.1e-33 144.1 94 71.3
FAN11G0642 Fragaria x ananassa HOM05D000355 ORTHO05D000227 1.0e-32 143.3 83 84.3
FAN12G2468 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.0e-32 141.7 75 89.3
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 3.0e-32 141.7 94 68.1
RcHm_v2.0_Chr5g0040041 Rosa chinensis HOM05D000003 ORTHO05D006737 1.1e-31 139.8 94 68.1
FAN12G3592 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.5e-31 139.4 75 88.0
RcHm_v2.0_Chr1g0344421 Rosa chinensis HOM05D000003 ORTHO05D006737 1.3e-30 136.3 94 64.9
FAN13G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.6e-30 136.0 93 66.7
RcHm_v2.0_Chr5g0031961 Rosa chinensis HOM05D000003 ORTHO05D006737 3.7e-30 134.8 94 64.9
FAN09G3586 Fragaria x ananassa HOM05D004387 ORTHO05D005218 1.1e-29 133.3 75 82.7
FAN18G0619 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.1e-29 131.3 93 64.5
RcHm_v2.0_Chr4g0397511 Rosa chinensis HOM05D000003 ORTHO05D006737 5.3e-29 131.0 94 61.7
RcHm_v2.0_Chr2g0125521 Rosa chinensis HOM05D000003 ORTHO05D006737 4.5e-28 127.9 93 61.3
FvH4_6g06990 Fragaria vesca HOM05D000003 ORTHO05D006737 1.8e-24 115.9 66 81.8
FvH4_5g01660 Fragaria vesca HOM05D000003 ORTHO05D006737 3.9e-24 114.8 61 90.2
FAN01G1087 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.5e-23 112.1 85 62.4
FvH4_5g04911 Fragaria vesca HOM05D000003 ORTHO05D006737 7.4e-23 110.5 78 65.4
FAN07G0617 Fragaria x ananassa HOM05D000003 ORTHO05D006737 9.7e-23 110.2 85 60.0
FvH4_6g32941 Fragaria vesca HOM05D000003 ORTHO05D006737 1.7e-22 109.4 88 59.1
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 4.8e-22 107.8 95 52.6
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 1.5e-20 102.8 74 71.6
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 7.7e-20 100.5 94 48.9
RcHm_v2.0_Chr7g0176911 Rosa chinensis HOM05D000003 ORTHO05D006737 7.7e-20 100.5 91 50.5
RcHm_v2.0_Chr5g0065261 Rosa chinensis HOM05D000003 ORTHO05D006737 1.0e-19 100.1 91 49.5
RcHm_v2.0_Chr6g0288751 Rosa chinensis HOM05D000003 ORTHO05D006737 1.0e-19 100.1 91 49.5
RcHm_v2.0_Chr4g0395671 Rosa chinensis HOM05D000003 ORTHO05D006737 2.2e-19 99.0 93 51.6
RcHm_v2.0_Chr7g0212601 Rosa chinensis HOM05D000003 ORTHO05D006737 2.9e-19 98.6 90 50.0
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 3.8e-19 98.2 63 71.4
FAN01G2975 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.5e-19 97.1 93 52.7
FvH4_2g00211 Fragaria vesca HOM05D000003 ORTHO05D006737 1.1e-18 96.7 91 47.3
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 3.2e-18 95.1 91 46.2
FAN08G0755 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.2e-18 94.0 62 66.1
FAN14G3227 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.2e-18 94.0 92 53.3
RcHm_v2.0_Chr7g0198361 Rosa chinensis HOM05D000003 ORTHO05D006737 9.4e-18 93.6 93 45.2
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 1.6e-17 92.8 90 44.4
FvH4_6g20980 Fragaria vesca HOM05D017784 ORTHO05D006737 1.6e-17 92.8 94 52.1
FvH4_5g01582 Fragaria vesca HOM05D000003 ORTHO05D006737 2.7e-17 92.0 59 67.8
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.6e-17 91.7 62 67.7
RcHm_v2.0_Chr1g0314431 Rosa chinensis HOM05D000003 ORTHO05D006737 6.1e-17 90.9 93 47.3
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 7.9e-17 90.5 90 43.3
RcHm_v2.0_Chr6g0286611 Rosa chinensis HOM05D000003 ORTHO05D006737 7.9e-17 90.5 59 69.5
RcHm_v2.0_Chr2g0118121 Rosa chinensis HOM05D000003 ORTHO05D006737 1.0e-16 90.1 87 44.8
RcHm_v2.0_Chr1g0336051 Rosa chinensis HOM05D000003 ORTHO05D006737 1.8e-16 89.4 94 45.7
FAN25G3140 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.1e-16 87.8 81 46.9
FvH4_6g36441 Fragaria vesca HOM05D000003 ORTHO05D019158 6.7e-16 87.4 94 43.6
RcHm_v2.0_Chr1g0348191 Rosa chinensis HOM05D000003 ORTHO05D006737 6.7e-16 87.4 78 51.3
FAN01G2436 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.5e-15 86.3 88 46.6
FvH4_1g25610 Fragaria vesca HOM05D000003 ORTHO05D000004 2.0e-15 85.9 94 39.4
RcHm_v2.0_Chr5g0036711 Rosa chinensis HOM05D000003 ORTHO05D006737 4.4e-15 84.7 79 50.6
FvH4_6g52701 Fragaria vesca HOM05D000003 ORTHO05D006737 7.4e-15 84.0 94 39.4
FAN19G0368 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.4e-15 84.0 80 50.0
RcHm_v2.0_Chr5g0033371 Rosa chinensis HOM05D000003 ORTHO05D006737 7.4e-15 84.0 89 46.1
RcHm_v2.0_Chr3g0474921 Rosa chinensis HOM05D000003 ORTHO05D006737 1.3e-14 83.2 77 50.6
FvH4_4g24131 Fragaria vesca HOM05D000003 ORTHO05D015112 2.8e-14 82.0 93 41.9
RcHm_v2.0_Chr5g0072311 Rosa chinensis HOM05D000003 ORTHO05D006737 3.7e-14 81.6 74 51.4
FvH4_6g21171 Fragaria vesca HOM05D000003 ORTHO05D006737 1.4e-13 79.7 78 41.0
RcHm_v2.0_Chr4g0423161 Rosa chinensis HOM05D000003 ORTHO05D006737 1.4e-13 79.7 74 52.7
RcHm_v2.0_Chr6g0260491 Rosa chinensis HOM05D000003 ORTHO05D006737 1.4e-13 79.7 88 44.3
FvH4_4g12942 Fragaria vesca HOM05D001338 ORTHO05D001239 5.3e-13 77.8 46 73.9
FAN09G3474 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.3e-13 77.8 96 41.7
RcHm_v2.0_Chr5g0004021 Rosa chinensis HOM05D000003 ORTHO05D006737 9.1e-13 77.0 73 50.7
FvH4_3g27973 Fragaria vesca HOM05D000003 ORTHO05D006737 1.2e-12 76.6 76 43.4
FvH4_5g31132 Fragaria vesca HOM05D002804 ORTHO05D006737 2.0e-12 75.9 78 43.6
FvH4_4g01552 Fragaria vesca HOM05D000003 ORTHO05D006737 2.6e-12 75.5 68 48.5
FAN04G0671 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.9e-12 74.3 86 45.3
FvH4_5g33393 Fragaria vesca HOM05D000003 ORTHO05D006737 7.7e-12 73.9 78 44.9
FvH4_5g30811 Fragaria vesca HOM05D000003 ORTHO05D006737 1.0e-11 73.6 86 41.9
FvH4_3g30681 Fragaria vesca HOM05D000003 ORTHO05D000006 1.3e-11 73.2 71 47.9
FAN15G1410 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.7e-11 72.8 68 44.1
FAN15G2825 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.0e-11 71.2 75 42.7
FAN13G3306 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.9e-10 69.3 68 39.7
FvH4_1g19421 Fragaria vesca HOM05D000003 ORTHO05D006737 2.5e-10 68.9 72 43.1
FAN22G0118 Fragaria x ananassa HOM05D001283 ORTHO05D001109 4.2e-10 68.2 73 43.8
FAN04G2364 Fragaria x ananassa HOM05D030836 ORTHO05D035801 9.4e-10 67.0 61 60.7
FAN16G3138 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.6e-09 66.2 67 44.8
FAN05G1347 Fragaria x ananassa HOM05D015760 ORTHO05D020672 4.7e-09 64.7 60 48.3
FvH4_6g08193 Fragaria vesca HOM05D000003 ORTHO05D006737 1.0e-08 63.5 63 38.1
Dinv21289 Davidia involucrata HOM05D000079 ORTHO05D000211 1.4e-08 63.2 93 31.2
FAN03G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.4e-08 63.2 67 46.3
FAN14G0257 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.4e-08 63.2 87 33.3
FAN19G0394 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.4e-08 63.2 64 42.2
FAN19G1043 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.4e-08 63.2 64 42.2
FAN27G1320 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.4e-08 63.2 65 43.1
FvH4_4g16971 Fragaria vesca HOM05D000003 ORTHO05D000004 2.3e-08 62.4 60 48.3
FvH4_5g12241 Fragaria vesca HOM05D000003 ORTHO05D000004 3.0e-08 62.0 59 47.5
FAN01G1551 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.7e-08 60.8 66 45.5
FAN07G0587 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.7e-08 60.8 73 42.5
Dinv32432 Davidia involucrata HOM05D000003 ORTHO05D011454 8.8e-08 60.5 93 31.2
FvH4_2g19503 Fragaria vesca HOM05D000003 ORTHO05D006737 2.6e-07 58.9 62 41.9
FAN28G0423 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.6e-07 58.9 66 45.5
FAN08G2392 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.3e-07 58.5 67 47.8
Dinv24219 Davidia involucrata HOM05D000003 ORTHO05D011454 7.5e-07 57.4 86 30.2
FAN26G2731 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.3e-06 56.6 57 49.1
FAN05G1674 Fragaria x ananassa HOM05D038108 ORTHO05D006737 3.7e-06 55.1 65 41.5
FAN11G2439 Fragaria x ananassa HOM05D046867 ORTHO05D045776 4.8e-06 54.7 63 39.7
Dinv08495 Davidia involucrata HOM05D000003 ORTHO05D000167 6.3e-06 54.3 92 28.3
FvH4_3g34330 Fragaria vesca HOM05D046867 ORTHO05D045776 6.3e-06 54.3 63 39.7
FvH4_4g07172 Fragaria vesca HOM05D000003 ORTHO05D006737 6.3e-06 54.3 52 53.8
FAN05G0213 Fragaria x ananassa HOM05D001310 ORTHO05D008060 6.3e-06 54.3 33 69.7
FAN09G1162 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.2e-06 53.9 47 57.4
FAN26G0688 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.2e-06 53.9 58 48.3


User provided reference genes

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