Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g39040 Fragaria vesca HOM05D006208 ORTHO05D007606 1.1e-128 463.4 241 100.0
FAN18G4346 Fragaria x ananassa HOM05D006208 ORTHO05D007606 5.5e-125 451.1 241 96.7
FAN04G2426 Fragaria x ananassa HOM05D006208 ORTHO05D007606 2.2e-121 439.1 241 95.9
FAN13G0695 Fragaria x ananassa HOM05D006208 ORTHO05D007606 4.7e-116 421.4 243 93.0
FvH4_3g02594 Fragaria vesca HOM05D006208 ORTHO05D007606 5.8e-90 334.7 238 77.7
RcHm_v2.0_Chr3g0495701 Rosa chinensis HOM05D006208 ORTHO05D007606 1.5e-85 320.1 228 75.9
MD12G1014000 Malus domestica HOM05D006208 ORTHO05D007606 8.9e-75 284.3 243 65.8
TWI34G1475 Tripterygium wilfordii HOM05D006208 ORTHO05D007606 3.4e-66 255.8 239 59.4
Lalb_Chr22g0358421 Lupinus albus HOM05D006208 ORTHO05D007606 7.6e-66 254.6 235 60.4
Thecc.05G239100 Theobroma cacao HOM05D006208 ORTHO05D007606 7.6e-66 254.6 230 58.7
QL07p016540 Quercus lobata HOM05D006208 ORTHO05D007606 9.9e-66 254.2 240 59.6
Ca_03440_v3 Cicer arietinum L. HOM05D006208 ORTHO05D007606 3.8e-65 252.3 230 60.9
Ca_08778_v3 Cicer arietinum L. HOM05D006208 ORTHO05D007606 3.8e-65 252.3 230 60.9
Duzib177G0527 Durio zibethinus HOM05D006208 ORTHO05D007606 6.4e-65 251.5 230 58.3
Gorai.013G113800 Gossypium raimondii HOM05D006208 ORTHO05D007606 1.2e-63 247.3 212 60.8
Gohir.D13G101700 Gossypium hirsutum HOM05D006208 ORTHO05D007606 1.6e-63 246.9 233 57.1
VMungo1383G1214 Vigna mungo HOM05D006208 ORTHO05D007606 4.6e-63 245.4 232 59.5
Manes.08G150900 Manihot esculenta HOM05D006208 ORTHO05D007606 2.3e-62 243.0 238 56.7
Gohir.A13G096300 Gossypium hirsutum HOM05D006208 ORTHO05D007606 8.7e-62 241.1 233 55.8
Eucgr.K01547 Eucalyptus grandis HOM05D006208 ORTHO05D007606 1.9e-61 240.0 240 54.6
Cfa019872 Carpinus fangiana HOM05D006208 ORTHO05D007606 2.5e-61 239.6 213 60.6
Glyma.19G119400 Glycine max HOM05D006208 ORTHO05D007606 3.3e-61 239.2 237 57.4
MELO3C019160.2 Cucumis melo HOM05D006208 ORTHO05D007606 9.6e-61 237.7 229 57.6
Potri.013G067600 Populus trichocarpa HOM05D006208 ORTHO05D007606 1.3e-60 237.3 234 55.6
vmacro07634 Vaccinium macrocarpon HOM05D006208 ORTHO05D007606 1.3e-60 237.3 253 54.5
Carub.0001s0806 Capsella rubella HOM05D006208 ORTHO05D007606 6.2e-60 235.0 235 53.2
Nitab4.5_0015172g0010 Nicotiana tabacum HOM05D006208 ORTHO05D007606 1.8e-59 233.4 237 55.3
CANSAT78G0878 Cannabis sativa HOM05D006208 ORTHO05D007606 2.4e-59 233.0 214 58.4
CARHR008630 Cardamine hirsuta HOM05D006208 ORTHO05D007606 5.3e-59 231.9 236 53.4
BraA06t23774Z Brassica rapa HOM05D000200 ORTHO05D000262 6.9e-59 231.5 235 54.0
Dinv14560 Davidia involucrata HOM05D006208 ORTHO05D007606 1.2e-58 230.7 238 58.0
A06p05650 Brassica napus HOM05D000200 ORTHO05D000262 1.5e-58 230.3 235 53.6
Nitab4.5_0000381g0210 Nicotiana tabacum HOM05D006208 ORTHO05D007606 2.6e-58 229.6 237 54.4
Medtr7g087140 Medicago truncatula HOM05D006208 ORTHO05D007606 3.4e-58 229.2 230 56.1
Sabra13G0059000 Salix brachista HOM05D006208 ORTHO05D007606 4.5e-58 228.8 237 52.7
AT1G08710 Arabidopsis thaliana HOM05D006208 ORTHO05D007606 1.3e-57 227.3 236 53.8
BcaC05g24798 Brassica carinata HOM05D006208 ORTHO05D007606 1.3e-57 227.3 238 52.1
BcaB07g34110 Brassica carinata HOM05D006208 ORTHO05D007606 1.7e-57 226.9 239 54.0
COL.COLO4_08902 Corchorus olitorius HOM05D006208 ORTHO05D007606 2.2e-57 226.5 230 56.1
CiPaw.09G165300 Carya illinoinensis HOM05D006208 ORTHO05D007606 2.9e-57 226.1 240 55.4
GSVIVG01029918001 Vitis vinifera HOM05D006208 ORTHO05D007606 2.9e-57 226.1 236 53.0
AL1G19150 Arabidopsis lyrata HOM05D006208 ORTHO05D007606 3.8e-57 225.7 235 53.2
Ciclev10032470m.g Citrus clementina HOM05D006208 ORTHO05D007606 6.4e-57 224.9 218 56.9
Phvul.001G107700 Phaseolus vulgaris HOM05D006208 ORTHO05D007606 9.3e-56 221.1 183 63.9
Lj1g0003173 Lotus japonicus HOM05D006208 ORTHO05D007606 2.1e-55 219.9 209 58.4
EL10As12g24012 Beta vulgaris HOM05D006208 ORTHO05D007606 3.5e-55 219.2 213 56.8
Hma1.2p1_1127F.1_g259670 Hydrangea macrophylla HOM05D006208 ORTHO05D007606 1.3e-54 217.2 243 52.3
Solyc10g085660.3 Solanum lycopersicum HOM05D006208 ORTHO05D007606 2.3e-54 216.5 230 51.7
Cc03_g15330 Coffea canephora HOM05D006208 ORTHO05D007606 3.0e-54 216.1 248 49.6
Lj1A1159G88 Lonicera japonica HOM05D006208 ORTHO05D007606 3.0e-54 216.1 246 52.0
Aa31sc449G40 Aethionema arabicum HOM05D006208 ORTHO05D007606 5.1e-54 215.3 244 49.2
AUR62036506 Chenopodium quinoa HOM05D006208 ORTHO05D007606 6.7e-54 214.9 242 51.2
Sopen10g035070 Solanum pennellii HOM05D006208 ORTHO05D007606 6.7e-54 214.9 240 50.4
Migut.B00931 Erythranthe guttata HOM05D006208 ORTHO05D007606 1.5e-53 213.8 233 51.9
unitig_0.g581 Utricularia gibba HOM05D006208 ORTHO05D007606 1.9e-53 213.4 242 50.0
PGSC0003DMG400008402 Solanum tuberosum HOM05D006208 ORTHO05D007606 2.5e-53 213.0 230 50.9
Psat3g085200 Pisum sativum HOM05D006208 ORTHO05D007606 7.4e-53 211.5 186 62.9
CAN.G1018.11 Capsicum annuum HOM05D006208 ORTHO05D007606 9.6e-53 211.1 212 52.4
Hund10725 Selenicereus undatus HOM05D006208 ORTHO05D007606 9.6e-53 211.1 244 50.8
ClCG04G006060 Citrullus lanatus HOM05D006208 ORTHO05D007606 2.1e-52 209.9 286 45.8
SGA_v2.0_scaffold66G22407 Striga asiatica HOM05D006208 ORTHO05D007606 2.8e-52 209.5 223 52.0
Peaxi162Scf00146g00097 Petunia axillaris HOM05D006208 ORTHO05D007606 4.5e-50 202.2 211 49.8
THA.LOC104798848 Tarenaya hassleriana HOM05D006208 ORTHO05D007606 4.5e-50 202.2 237 51.5
Sed0009124 Sechium edule HOM05D006208 ORTHO05D007606 7.6e-50 201.4 204 54.9
arahy.Tifrunner.gnm1.ann1.71CHM8 Arachis hypogaea HOM05D006208 ORTHO05D007606 1.7e-49 200.3 235 51.5
ECA232G0512 Erigeron canadensis HOM05D006208 ORTHO05D007606 1.7e-49 200.3 236 50.0
Thhalv10008513m.g Eutrema salsugineum HOM05D006208 ORTHO05D007606 1.7e-49 200.3 235 48.9
Atru.chr2.1570 Acer truncatum HOM05D006208 ORTHO05D007606 3.8e-49 199.1 238 50.8
SalBow6G5221 Salvia bowleyana HOM05D006208 ORTHO05D007606 4.9e-49 198.7 250 46.4
Hma1.2p1_0776F.1_g216610 Hydrangea macrophylla HOM05D006208 ORTHO05D007606 6.5e-49 198.4 217 53.5
DCAR_020701 Daucus carota HOM05D006208 ORTHO05D007606 1.9e-48 196.8 212 53.3
Aqoxy6G01592 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 3.2e-48 196.1 235 46.0
Nn8g39480 Nelumbo nucifera HOM05D006208 ORTHO05D007606 3.2e-48 196.1 235 50.2
Sp1g07360 Schrenkiella parvula HOM05D006208 ORTHO05D007606 3.2e-48 196.1 235 48.1
MSTRG.19726 Avicennia marina HOM05D006208 ORTHO05D007606 5.5e-48 195.3 240 47.9
MBI19_g04334_MAGBIO Magnolia biondii HOM05D006208 ORTHO05D007606 7.1e-48 194.9 228 49.1
Haze_20379 Corylus avellana HOM05D006208 ORTHO05D007606 4.6e-47 192.2 234 47.9
CsaV3_4G029050 Cucumis sativus L. HOM05D006208 ORTHO05D007606 4.6e-47 192.2 174 58.6
arahy.Tifrunner.gnm1.ann1.2NMK5X Arachis hypogaea HOM05D006208 ORTHO05D007606 2.3e-46 189.9 187 57.2
Ah.12g062010 Amaranthus hybridus HOM05D006208 ORTHO05D007606 1.9e-45 186.8 201 52.7
Peaxi162Scf00146g00107 Petunia axillaris HOM05D006208 ORTHO05D007606 7.4e-45 184.9 213 46.0
Peaxi162Scf62544g00003 Petunia axillaris HOM05D006208 ORTHO05D007606 7.4e-45 184.9 213 46.0
HPP92_022884 Vanilla planifolia HOM05D006208 ORTHO05D007606 3.1e-43 179.5 208 49.5
Prupe.7G018500 Prunus persica HOM05D006208 ORTHO05D007606 8.5e-41 171.4 139 66.2
HanXRQChr09g0255371 Helianthus annuus HOM05D006208 ORTHO05D007606 1.6e-39 167.2 205 50.2
FAN08G0500 Fragaria x ananassa HOM05D006208 ORTHO05D007606 8.7e-38 161.4 131 74.0
ATR0068G109 Amborella trichopoda HOM05D006208 ORTHO05D007606 1.9e-37 160.2 232 42.2
TAR636G0902 Trochodendron aralioides HOM05D006208 ORTHO05D007606 4.5e-34 149.1 162 53.1
Cpa.g.sc73.15 Carica papaya HOM05D006208 ORTHO05D007606 1.7e-33 147.1 145 55.9
Lsat_1_v5_gn_4_159701 Lactuca sativa HOM05D006208 ORTHO05D007606 1.4e-32 144.1 200 41.5
Os01g0814700 Oryza sativa ssp. japonica HOM05D006208 ORTHO05D007606 2.1e-31 140.2 194 44.3
Zm00001eb149890 Zea mays HOM05D006208 ORTHO05D007606 1.0e-30 137.9 188 43.6
Rhsim03G0045600 Rhododendron simsii HOM05D006208 ORTHO05D007606 1.8e-30 137.1 153 52.3
FAN21G1425 Fragaria x ananassa HOM05D006208 ORTHO05D007606 3.0e-30 136.3 85 84.7
TPR.G7831 Trifolium pratense HOM05D006208 ORTHO05D007606 2.2e-28 130.2 143 49.7
SEGI_27241 Sequoiadendron giganteum HOM05D006208 ORTHO05D007606 6.3e-28 128.6 208 37.0
C05p06800 Brassica napus HOM05D006208 ORTHO05D007606 1.8e-27 127.1 138 49.3
CDE09G0594 Ceratophyllum demersum HOM05D002946 ORTHO05D007606 2.4e-27 126.7 184 44.0
SHI14855 Sapria himalayana HOM05D000023 ORTHO05D000014 6.9e-27 125.2 170 46.5
BolC5t29439H Brassica oleracea HOM05D006208 ORTHO05D007606 9.1e-27 124.8 138 48.6
TPR.G35926 Trifolium pratense HOM05D006208 ORTHO05D007606 2.1e-23 113.6 102 61.8
Pp3c18_14450 Physcomitrium patens HOM05D006208 ORTHO05D007606 1.0e-22 111.3 245 28.2
VMungo1383G2538 Vigna mungo HOM05D006208 ORTHO05D007606 2.3e-22 110.2 143 49.0
AUR62037069 Chenopodium quinoa HOM05D006208 ORTHO05D007606 3.3e-21 106.3 117 53.0
Sc22g0000860 Simmondsia chinensis HOM05D006208 ORTHO05D007606 1.8e-19 100.5 111 54.1
SMO351G0165 Selaginella moellendorffii HOM05D006208 ORTHO05D007606 4.1e-19 99.4 217 32.7
Rhsim03G0045700 Rhododendron simsii HOM05D006208 ORTHO05D007606 3.5e-18 96.3 100 55.0
Medtr7g087170 Medicago truncatula HOM05D006208 ORTHO05D007606 4.5e-18 95.9 80 58.8
CBR_g36542 Chara braunii HOM05D006208 ORTHO05D007606 3.2e-16 89.7 218 29.8
Sc22g0000880 Simmondsia chinensis HOM05D006208 ORTHO05D007606 1.2e-15 87.8 155 37.4
Mapoly0047s0023 Marchantia polymorpha HOM05D006208 ORTHO05D007606 2.3e-14 83.6 213 27.2
TPR.G15311 Trifolium pratense HOM05D006208 ORTHO05D007606 1.2e-13 81.3 109 46.8
TPR.G7822 Trifolium pratense HOM05D006208 ORTHO05D007606 4.4e-13 79.3 240 30.4
Peaxi162Scf00146g00108 Petunia axillaris HOM05D006208 ORTHO05D007606 7.5e-13 78.6 74 54.1
C05p06810 Brassica napus HOM05D000200 ORTHO05D000262 1.4e-11 74.3 78 50.0
BolC5t29440H Brassica oleracea HOM05D000200 ORTHO05D000262 1.4e-11 74.3 78 50.0
SHI14857 Sapria himalayana HOM05D006208 ORTHO05D007606 9.1e-11 71.6 90 43.3
Oeu029768.1 Olea europaea HOM05D006208 ORTHO05D007606 4.5e-10 69.3 74 44.6
Aqoxy3G03662 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 1.3e-09 67.8 130 34.6
AL5G15230 Arabidopsis lyrata HOM05D001124 ORTHO05D007606 2.2e-09 67.0 139 36.0
Oeu029769.2 Olea europaea HOM05D006208 ORTHO05D007606 2.9e-09 66.6 74 43.2
AagrBONN_evm.TU.Sc2ySwM_117.1480 Anthoceros agrestis HOM05D006208 ORTHO05D007606 1.1e-08 64.7 153 24.8
arahy.Tifrunner.gnm1.ann1.Q1DBZB Arachis hypogaea HOM05D006208 ORTHO05D007606 9.4e-08 61.6 60 48.3
Medtr7g087330 Medicago truncatula HOM05D006208 ORTHO05D007606 2.7e-07 60.1 99 43.4
SalBow5G5293 Salvia bowleyana HOM05D000001 ORTHO05D009952 3.6e-07 59.7 113 32.7
Oeu054958.1 Olea europaea HOM05D006208 ORTHO05D007606 4.7e-07 59.3 82 43.9
TPR.G7816 Trifolium pratense HOM05D006208 ORTHO05D007606 1.4e-06 57.8 70 42.9
Aqoxy3G03625 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 4.0e-06 56.2 127 36.2
Pp3c18_2140 Physcomitrium patens HOM05D006208 ORTHO05D007606 4.0e-06 56.2 67 44.8
Oeu032547.1 Olea europaea HOM05D006208 ORTHO05D007606 6.8e-06 55.5 52 50.0


User provided reference genes

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