Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 2.2e-93 345.9 208 100.0
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.5e-91 339.7 208 99.0
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.6e-91 339.0 208 95.7
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.4e-91 338.6 208 98.1
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.0e-87 327.0 208 93.3
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.0e-71 272.3 213 83.1
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 1.0e-66 257.3 211 81.0
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 8.3e-37 157.9 188 52.7
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 2.3e-34 149.8 197 48.2
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 3.9e-34 149.1 217 42.9
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 3.9e-34 149.1 193 49.2
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 6.6e-34 148.3 193 49.2
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 3.3e-33 146.0 216 47.7
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 3.6e-32 142.5 188 44.1
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 3.6e-32 142.5 188 44.1
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 6.2e-32 141.7 229 49.3
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 8.1e-32 141.4 218 42.2
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 8.9e-31 137.9 228 39.5
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 2.0e-30 136.7 187 47.6
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 4.4e-30 135.6 205 45.4
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 5.8e-30 135.2 207 42.0
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 1.7e-29 133.7 218 37.6
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 2.2e-29 133.3 228 42.1
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.2e-29 133.3 201 41.3
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 3.8e-29 132.5 224 39.7
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 4.9e-29 132.1 200 43.5
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.9e-28 130.2 199 41.2
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.9e-28 130.2 200 42.0
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 2.4e-28 129.8 208 44.2
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.4e-28 129.8 201 40.8
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 3.2e-28 129.4 241 39.4
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 3.2e-28 129.4 195 46.7
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 5.4e-28 128.6 228 40.8
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 7.1e-28 128.3 203 42.4
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.2e-27 127.5 207 38.6
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 3.5e-27 125.9 232 41.4
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 4.6e-27 125.6 240 40.4
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 6.0e-27 125.2 232 40.5
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 7.8e-27 124.8 188 43.6
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 1.3e-26 124.0 200 41.0
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 1.3e-26 124.0 188 44.7
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 3.9e-26 122.5 176 43.2
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 3.9e-26 122.5 203 41.9
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 5.1e-26 122.1 177 43.5
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 8.7e-26 121.3 225 42.2
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 9.6e-25 117.9 223 38.6
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 9.6e-25 117.9 198 44.9
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 1.2e-24 117.5 201 42.3
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 1.6e-24 117.1 252 38.1
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 2.8e-24 116.3 175 42.9
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 2.8e-24 116.3 212 43.9
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 2.8e-24 116.3 160 46.2
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 2.8e-24 116.3 205 45.9
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 3.6e-24 115.9 176 42.6
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 8.1e-24 114.8 219 38.4
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.1e-23 114.4 187 38.0
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 3.1e-23 112.8 229 37.6
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 2.0e-22 110.2 178 39.3
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 2.6e-22 109.8 250 34.8
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 2.6e-22 109.8 199 40.2
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 4.4e-22 109.0 227 37.9
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 5.8e-22 108.6 176 41.5
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 5.8e-22 108.6 195 40.0
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 1.3e-21 107.5 168 42.9
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.7e-21 107.1 184 41.3
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 2.2e-21 106.7 206 43.2
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 3.8e-21 105.9 173 40.5
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 4.9e-21 105.5 199 35.7
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 6.4e-21 105.1 219 33.8
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.4e-20 104.0 196 38.8
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 1.4e-20 104.0 243 34.2
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 3.2e-20 102.8 187 39.6
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 3.2e-20 102.8 187 39.6
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 4.2e-20 102.4 216 36.6
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.2e-20 102.4 196 38.8
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 5.4e-20 102.1 141 45.4
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 2.1e-19 100.1 209 40.2
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 2.7e-19 99.8 187 36.9
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 7.8e-19 98.2 141 44.0
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 1.0e-18 97.8 185 38.4
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 1.0e-18 97.8 185 38.4
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 1.3e-18 97.4 168 39.9
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 1.7e-18 97.1 179 38.0
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 2.3e-18 96.7 215 34.4
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.0e-18 96.3 170 40.0
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 5.1e-18 95.5 177 37.3
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 5.6e-17 92.0 179 37.4
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 7.3e-17 91.7 171 38.6
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 7.3e-17 91.7 171 39.8
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 2.8e-16 89.7 173 39.3
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 3.6e-16 89.4 179 36.3
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.3e-13 80.9 182 35.7
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 1.7e-13 80.5 186 34.9
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 1.9e-12 77.0 232 29.7
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 5.4e-12 75.5 121 42.1
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 7.9e-11 71.6 149 34.9
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 7.9e-11 71.6 189 36.0
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 1.3e-10 70.9 231 28.6
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.3e-09 66.2 191 32.5
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.3e-09 66.2 191 32.5
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 2.8e-08 63.2 171 34.5
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 2.8e-08 63.2 174 34.5
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 3.7e-08 62.8 179 29.6
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 1.1e-07 61.2 179 30.2
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 1.8e-07 60.5 194 28.9


User provided reference genes

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